RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 C5orf42Q9H799 3197 aa15.44■□□□□ 0.06
CPSF7-202ENST00000394888 CIB2O75838 187 aa15.44■□□□□ 0.06
CPSF7-202ENST00000394888 KLKB1P03952 638 aa15.44■□□□□ 0.06
CPSF7-202ENST00000394888 SLC11A1P49279 550 aa15.44■□□□□ 0.06
CPSF7-202ENST00000394888 PLK1P53350 603 aa15.44■□□□□ 0.06
CPSF7-202ENST00000394888 SH3BP2P78314 561 aa15.44■□□□□ 0.06
CPSF7-202ENST00000394888 RING1Q06587 406 aa15.44■□□□□ 0.06
CPSF7-202ENST00000394888 GSTA3Q16772 222 aa15.44■□□□□ 0.06
CPSF7-202ENST00000394888 UGT2A3Q6UWM9 527 aa15.44■□□□□ 0.06
CPSF7-202ENST00000394888 JADE3Q92613 823 aa15.44■□□□□ 0.06
CPSF7-202ENST00000394888 SCYL1Q96KG9 808 aa15.44■□□□□ 0.06
CPSF7-202ENST00000394888 ATOH8Q96SQ7 321 aa15.44■□□□□ 0.06
CPSF7-202ENST00000394888 MGME1Q9BQP7 344 aa15.44■□□□□ 0.06
CPSF7-202ENST00000394888 TTLL2Q9BWV7 592 aa15.44■□□□□ 0.06
CPSF7-202ENST00000394888 DLGAP2Q9P1A6 1054 aa15.44■□□□□ 0.06
CPSF7-202ENST00000394888 HELZP42694 1942 aaKnown RBP15.44■□□□□ 0.06
CPSF7-202ENST00000394888 GOT2P00505 430 aaKnown RBP15.43■□□□□ 0.06
CPSF7-202ENST00000394888 LTA4HP09960 611 aaKnown RBP15.43■□□□□ 0.06
CPSF7-202ENST00000394888 THRAP10827 490 aa15.43■□□□□ 0.06
CPSF7-202ENST00000394888 YWHAQP27348 245 aa15.43■□□□□ 0.06
CPSF7-202ENST00000394888 RNF168Q8IYW5 571 aaPredicted RBP15.43■□□□□ 0.06
CPSF7-202ENST00000394888 MDGA1Q8NFP4 955 aa15.43■□□□□ 0.06
CPSF7-202ENST00000394888 SLC26A7Q8TE54 656 aa15.43■□□□□ 0.06
CPSF7-202ENST00000394888 PPP1R2P1Q96PQ5 205 aa15.43■□□□□ 0.06
CPSF7-202ENST00000394888 NR1H4Q96RI1 486 aaPredicted RBP15.43■□□□□ 0.06
CPSF7-202ENST00000394888 SLC30A3Q99726 388 aa15.43■□□□□ 0.06
CPSF7-202ENST00000394888 CDYLQ9Y232 598 aa15.43■□□□□ 0.06
CPSF7-202ENST00000394888 PCDHB5Q9Y5E4 795 aa15.43■□□□□ 0.06
CPSF7-202ENST00000394888 PEX1O43933 1283 aa15.43■□□□□ 0.06
CPSF7-202ENST00000394888 PENKP01210 267 aaPredicted RBP15.43■□□□□ 0.06
CPSF7-202ENST00000394888 SMIM18P0DKX4 95 aa15.43■□□□□ 0.06
CPSF7-202ENST00000394888 PKNOX1P55347 436 aa15.43■□□□□ 0.06
CPSF7-202ENST00000394888 CUZD1Q86UP6 607 aa15.43■□□□□ 0.06
CPSF7-202ENST00000394888 MIB1Q86YT6 1006 aa15.43■□□□□ 0.06
CPSF7-202ENST00000394888 FAM156AQ8NDB6 213 aa15.43■□□□□ 0.06
CPSF7-202ENST00000394888 MICAL1Q8TDZ2 1067 aa15.43■□□□□ 0.06
CPSF7-202ENST00000394888 LRCH3Q96II8 777 aa15.43■□□□□ 0.06
CPSF7-202ENST00000394888 CDRT15Q96T59 188 aa15.43■□□□□ 0.06
CPSF7-202ENST00000394888 UBAP1Q9NZ09 502 aa15.43■□□□□ 0.06
CPSF7-202ENST00000394888 ZNF225Q9UK10 706 aa15.43■□□□□ 0.06
CPSF7-202ENST00000394888 G3BP2Q9UN86 482 aaKnown RBP15.43■□□□□ 0.06
CPSF7-202ENST00000394888 VWA7Q9Y334 891 aa15.43■□□□□ 0.06
CPSF7-202ENST00000394888 A0A1W2PQ45 241 aaPredicted RBP15.42■□□□□ 0.06
CPSF7-202ENST00000394888 A0A1W2PQY0 241 aa15.42■□□□□ 0.06
CPSF7-202ENST00000394888 CCDC162PA2VCL2 907 aa15.42■□□□□ 0.06
CPSF7-202ENST00000394888 IMPDH1P20839 514 aa15.42■□□□□ 0.06
CPSF7-202ENST00000394888 CREB5Q02930 508 aa15.42■□□□□ 0.06
CPSF7-202ENST00000394888 CYLC2Q14093 348 aaPredicted RBP15.42■□□□□ 0.06
CPSF7-202ENST00000394888 BTG3Q14201 252 aaPredicted RBP15.42■□□□□ 0.06
CPSF7-202ENST00000394888 GALNT3Q14435 633 aa15.42■□□□□ 0.06
CPSF7-202ENST00000394888 CLEC6AQ6EIG7 209 aa15.42■□□□□ 0.06
CPSF7-202ENST00000394888 GLB1LQ6UWU2 654 aa15.42■□□□□ 0.06
CPSF7-202ENST00000394888 CFAP52Q8N1V2 620 aa15.42■□□□□ 0.06
CPSF7-202ENST00000394888 KYQ8NBH2 561 aa15.42■□□□□ 0.06
CPSF7-202ENST00000394888 PABPC5Q96DU9 382 aaKnown RBP15.42■□□□□ 0.06
CPSF7-202ENST00000394888 SLC45A3Q96JT2 553 aa15.42■□□□□ 0.06
CPSF7-202ENST00000394888 FBRSL1Q9HCM7 1045 aaKnown RBP15.42■□□□□ 0.06
CPSF7-202ENST00000394888 MID2Q9UJV3 735 aa15.42■□□□□ 0.06
CPSF7-202ENST00000394888 ENPP3O14638 875 aa15.42■□□□□ 0.06
CPSF7-202ENST00000394888 TSPAN12O95859 305 aa15.42■□□□□ 0.06
CPSF7-202ENST00000394888 MARCH2Q9P0N8 246 aa15.42■□□□□ 0.06
CPSF7-202ENST00000394888 SLCO1B7G3V0H7 640 aa15.42■□□□□ 0.06
CPSF7-202ENST00000394888 BCAS2O75934 225 aaPredicted RBP15.42■□□□□ 0.06
CPSF7-202ENST00000394888 CDKN1CP49918 316 aaPredicted RBP15.42■□□□□ 0.06
CPSF7-202ENST00000394888 ASPHQ12797 758 aa15.42■□□□□ 0.06
CPSF7-202ENST00000394888 GPR17Q13304 367 aa15.42■□□□□ 0.06
CPSF7-202ENST00000394888 GK3PQ14409 553 aa15.42■□□□□ 0.06
CPSF7-202ENST00000394888 TLR1Q15399 786 aa15.42■□□□□ 0.06
CPSF7-202ENST00000394888 LRRC36Q1X8D7 754 aa15.42■□□□□ 0.06
CPSF7-202ENST00000394888 PARP15Q460N3 678 aa15.42■□□□□ 0.06
CPSF7-202ENST00000394888 CCDC97Q96F63 343 aaPredicted RBP15.42■□□□□ 0.06
CPSF7-202ENST00000394888 FEM1CQ96JP0 617 aa15.42■□□□□ 0.06
CPSF7-202ENST00000394888 NSUN5Q96P11 429 aaKnown RBP15.42■□□□□ 0.06
CPSF7-202ENST00000394888 CACNA2D2Q9NY47 1150 aa15.42■□□□□ 0.06
CPSF7-202ENST00000394888 ANKRD12Q6UB98 2062 aa15.42■□□□□ 0.06
CPSF7-202ENST00000394888 ZNF37AP17032 561 aaPredicted RBP15.41■□□□□ 0.06
CPSF7-202ENST00000394888 TSPAN8P19075 237 aa15.41■□□□□ 0.06
CPSF7-202ENST00000394888 CA5AP35218 305 aa15.41■□□□□ 0.06
CPSF7-202ENST00000394888 ETFBP38117 255 aa15.41■□□□□ 0.06
CPSF7-202ENST00000394888 RETREG3Q86VR2 466 aa15.41■□□□□ 0.06
CPSF7-202ENST00000394888 DCP1BQ8IZD4 617 aaKnown RBP15.41■□□□□ 0.06
CPSF7-202ENST00000394888 CCNYL1Q8N7R7 359 aa15.41■□□□□ 0.06
CPSF7-202ENST00000394888 OR9I1Q8NGQ6 314 aa15.41■□□□□ 0.06
CPSF7-202ENST00000394888 USP13Q92995 863 aaPredicted RBP15.41■□□□□ 0.06
CPSF7-202ENST00000394888 BIRC8Q96P09 236 aa15.41■□□□□ 0.06
CPSF7-202ENST00000394888 SEMA3CQ99985 751 aa15.41■□□□□ 0.06
CPSF7-202ENST00000394888 WDR41Q9HAD4 459 aa15.41■□□□□ 0.06
CPSF7-202ENST00000394888 TMEM161AQ9NX61 479 aa15.41■□□□□ 0.06
CPSF7-202ENST00000394888 NCKIPSDQ9NZQ3 722 aa15.41■□□□□ 0.06
CPSF7-202ENST00000394888 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.41■□□□□ 0.06
CPSF7-202ENST00000394888 PIRTP0C851 137 aa15.41■□□□□ 0.06
CPSF7-202ENST00000394888 UBTFL6P0CB48 400 aaPredicted RBP15.41■□□□□ 0.06
CPSF7-202ENST00000394888 GPX3P22352 226 aa15.41■□□□□ 0.06
CPSF7-202ENST00000394888 CTXN3Q4LDR2 81 aa15.41■□□□□ 0.06
CPSF7-202ENST00000394888 FAM171A1Q5VUB5 890 aa15.41■□□□□ 0.06
CPSF7-202ENST00000394888 ACAD11Q709F0 780 aa15.41■□□□□ 0.06
CPSF7-202ENST00000394888 RNF148Q8N7C7 305 aa15.41■□□□□ 0.06
CPSF7-202ENST00000394888 HIPK4Q8NE63 616 aa15.41■□□□□ 0.06
CPSF7-202ENST00000394888 ALG9Q9H6U8 611 aa15.41■□□□□ 0.06
CPSF7-202ENST00000394888 DNAJC15Q9Y5T4 150 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms