RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 IPO13O94829 963 aaKnown RBP8.42□□□□□ -1.06
VPS36-201ENST00000378060 URODP06132 367 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 CREB1P16220 341 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 ITGB6P18564 788 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 FOXN2P32314 431 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 IRF8Q02556 426 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 ZIK1Q3SY52 487 aaPredicted RBP8.42□□□□□ -1.06
VPS36-201ENST00000378060 TMEM63BQ5T3F8 832 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 RGMBQ6NW40 437 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 ERAP2Q6P179 960 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 C11orf96Q7Z7L8 435 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 TLK2Q86UE8 772 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 CUZD1Q86UP6 607 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 SYTL1Q8IYJ3 562 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 C12orf29Q8N999 325 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 ATL1Q8WXF7 558 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 UROC1Q96N76 676 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 WDR12Q9GZL7 423 aaKnown RBP8.42□□□□□ -1.06
VPS36-201ENST00000378060 TXNRD2Q9NNW7 524 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 TRPC4Q9UBN4 977 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 LAMA2P24043 3122 aaKnown RBP8.41□□□□□ -1.06
VPS36-201ENST00000378060 ATP6AP2A0A1C7CYW4 349 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 H3BN98 237 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 KPNA5O15131 536 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 SLC22A3O75751 556 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 ATP6AP2O75787 350 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 CST3P01034 146 aaPredicted RBP8.41□□□□□ -1.06
VPS36-201ENST00000378060 ETS2P15036 469 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 HTR7P34969 479 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 CDC42P60953 191 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 GBE1Q04446 702 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 ZCCHC8Q6NZY4 707 aaKnown RBP8.41□□□□□ -1.06
VPS36-201ENST00000378060 ARHGAP36Q6ZRI8 547 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 RINLQ6ZS11 566 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 OR2T34Q8NGX1 318 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 OR2T3Q8NH03 318 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 GIPC3Q8TF64 312 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 C10orf82Q8WW14 230 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 PROX1Q92786 737 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 SEMA3CQ99985 751 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 MLPHQ9BV36 600 aaPredicted RBP8.41□□□□□ -1.06
VPS36-201ENST00000378060 UNC93B1Q9H1C4 597 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 RERGLQ9H628 205 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 CORO2BQ9UQ03 480 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.41□□□□□ -1.06
VPS36-201ENST00000378060 FAM25AB3EWG3 89 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 FAM25CB3EWG5 89 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 FAM25GB3EWG6 89 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 PAPSS1O43252 624 aaPredicted RBP8.41□□□□□ -1.06
VPS36-201ENST00000378060 STX11O75558 287 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 AP2A1O95782 977 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 CST1P01037 141 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 FESP07332 822 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 UMPSP11172 480 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 ITGA2P17301 1181 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 ARF4P18085 180 aaPredicted RBP8.41□□□□□ -1.06
VPS36-201ENST00000378060 MPSTP25325 297 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 RPL3P39023 403 aaKnown RBP8.41□□□□□ -1.06
VPS36-201ENST00000378060 MAPK10P53779 464 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 USP46P62068 366 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 RPS7P62081 194 aaKnown RBP8.41□□□□□ -1.06
VPS36-201ENST00000378060 CDK18Q07002 472 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 SFSWAPQ12872 951 aaKnown RBP8.41□□□□□ -1.06
VPS36-201ENST00000378060 ANKRD22Q5VYY1 191 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 DCLRE1AQ6PJP8 1040 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 KBTBD2Q8IY47 623 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 DPP10Q8N608 796 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 NIPA2Q8N8Q9 360 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 ZNF557Q8N988 423 aaPredicted RBP8.41□□□□□ -1.06
VPS36-201ENST00000378060 CD101Q93033 1021 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 ZHX1-C8orf76Q96EF9 292 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 ZFP42Q96MM3 310 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 QRFPRQ96P65 431 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 LENG8Q96PV6 779 aaPredicted RBP8.41□□□□□ -1.06
VPS36-201ENST00000378060 C2orf49Q9BVC5 232 aaPredicted RBP8.41□□□□□ -1.06
VPS36-201ENST00000378060 SERHL2Q9H4I8 314 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 ARMC7Q9H6L4 198 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 SERHLQ9NQF3 203 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 PTTG2Q9NZH5 202 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 ZNF536O15090 1300 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 SF3B1O75533 1304 aaKnown RBP eCLIP8.41□□□□□ -1.064e-7■■■■■ 136.6
VPS36-201ENST00000378060 PRR23AA6NEV1 266 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 COX7A2P14406 83 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 AKR1A1P14550 325 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 TYMPP19971 482 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 LPOP22079 712 aaPredicted RBP8.41□□□□□ -1.06
VPS36-201ENST00000378060 CDH3P22223 829 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 PPIBP23284 216 aaKnown RBP8.41□□□□□ -1.06
VPS36-201ENST00000378060 ARL2P36404 184 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 ATP5C1P36542 298 aaKnown RBP8.41□□□□□ -1.06
VPS36-201ENST00000378060 RAB15P59190 212 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 ACTR3P61158 418 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 BOP1Q14137 746 aaKnown RBP8.41□□□□□ -1.06
VPS36-201ENST00000378060 STARD3Q14849 445 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 ARL13AQ5H913 290 aaPredicted RBP8.41□□□□□ -1.06
VPS36-201ENST00000378060 PAGE2BQ5JRK9 111 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 ATAD3BQ5T9A4 648 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 CDC73Q6P1J9 531 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 C6orf89Q6UWU4 347 aa8.41□□□□□ -1.06
VPS36-201ENST00000378060 OOSP2Q86WS3 158 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms