RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 MTG1Q9BT17 334 aaPredicted RBP18■□□□□ 0.47
PHF1-201ENST00000374512 UNKQ9C0B0 810 aaKnown RBP18■□□□□ 0.47
PHF1-201ENST00000374512 FIS1Q9Y3D6 152 aa18■□□□□ 0.47
PHF1-201ENST00000374512 SCN10AQ9Y5Y9 1956 aa18■□□□□ 0.47
PHF1-201ENST00000374512 AQP12BA6NM10 295 aa18■□□□□ 0.47
PHF1-201ENST00000374512 B3GAT3O94766 335 aa18■□□□□ 0.47
PHF1-201ENST00000374512 CYP11A1P05108 521 aa18■□□□□ 0.47
PHF1-201ENST00000374512 RENBPP51606 427 aa18■□□□□ 0.47
PHF1-201ENST00000374512 CILP2Q8IUL8 1156 aa18■□□□□ 0.47
PHF1-201ENST00000374512 ERI1Q8IV48 349 aaKnown RBP18■□□□□ 0.47
PHF1-201ENST00000374512 AQP12AQ8IXF9 295 aa18■□□□□ 0.47
PHF1-201ENST00000374512 CLYBLQ8N0X4 340 aa18■□□□□ 0.47
PHF1-201ENST00000374512 IMP4Q96G21 291 aaKnown RBP18■□□□□ 0.47
PHF1-201ENST00000374512 TMEM79Q9BSE2 394 aa18■□□□□ 0.47
PHF1-201ENST00000374512 SEMA6AQ9H2E6 1030 aa18■□□□□ 0.47
PHF1-201ENST00000374512 C8orf4Q9NR00 106 aa18■□□□□ 0.47
PHF1-201ENST00000374512 TUBA8Q9NY65 449 aaPredicted RBP18■□□□□ 0.47
PHF1-201ENST00000374512 RSL24D1Q9UHA3 163 aaKnown RBP18■□□□□ 0.47
PHF1-201ENST00000374512 DSEQ9UL01 958 aa18■□□□□ 0.47
PHF1-201ENST00000374512 SLC8A2Q9UPR5 921 aa18■□□□□ 0.47
PHF1-201ENST00000374512 NDUFAF1Q9Y375 327 aa18■□□□□ 0.47
PHF1-201ENST00000374512 MYADML2A6NDP7 307 aa17.99■□□□□ 0.47
PHF1-201ENST00000374512 AURKAO14965 403 aa17.99■□□□□ 0.47
PHF1-201ENST00000374512 GPR182O15218 404 aa17.99■□□□□ 0.47
PHF1-201ENST00000374512 CHRNA1P02708 482 aa17.99■□□□□ 0.47
PHF1-201ENST00000374512 FGF4P08620 206 aa17.99■□□□□ 0.47
PHF1-201ENST00000374512 CHRNA4P43681 627 aa17.99■□□□□ 0.47
PHF1-201ENST00000374512 CDK9P50750 372 aaKnown RBP17.99■□□□□ 0.47
PHF1-201ENST00000374512 USP46P62068 366 aa17.99■□□□□ 0.47
PHF1-201ENST00000374512 PPP1R3AQ16821 1122 aa17.99■□□□□ 0.47
PHF1-201ENST00000374512 ZNF678Q5SXM1 525 aa17.99■□□□□ 0.47
PHF1-201ENST00000374512 ZBTB49Q6ZSB9 765 aa17.99■□□□□ 0.47
PHF1-201ENST00000374512 MRPL10Q7Z7H8 261 aaKnown RBP17.99■□□□□ 0.47
PHF1-201ENST00000374512 RNF135Q8IUD6 432 aa17.99■□□□□ 0.47
PHF1-201ENST00000374512 C19orf60Q96EN9 201 aa17.99■□□□□ 0.47
PHF1-201ENST00000374512 RMND5BQ96G75 393 aaPredicted RBP17.99■□□□□ 0.47
PHF1-201ENST00000374512 C1orf74Q96LT6 269 aa17.99■□□□□ 0.47
PHF1-201ENST00000374512 CYP2S1Q96SQ9 504 aa17.99■□□□□ 0.47
PHF1-201ENST00000374512 MFSD1Q9H3U5 465 aa17.99■□□□□ 0.47
PHF1-201ENST00000374512 ZFYVE28Q9HCC9 887 aa17.99■□□□□ 0.47
PHF1-201ENST00000374512 TNFRSF12AQ9NP84 129 aa17.99■□□□□ 0.47
PHF1-201ENST00000374512 PTBP2Q9UKA9 531 aaKnown RBP17.99■□□□□ 0.47
PHF1-201ENST00000374512 CNOT6Q9ULM6 557 aaKnown RBP17.99■□□□□ 0.47
PHF1-201ENST00000374512 DYTNA2CJ06 578 aa17.99■□□□□ 0.47
PHF1-201ENST00000374512 HNRNPRO43390 633 aaKnown RBP17.99■□□□□ 0.47
PHF1-201ENST00000374512 HTRA2O43464 458 aaPredicted RBP17.99■□□□□ 0.47
PHF1-201ENST00000374512 HERVK_113P63132 956 aa17.99■□□□□ 0.47
PHF1-201ENST00000374512 RALGDSQ12967 914 aa17.99■□□□□ 0.47
PHF1-201ENST00000374512 MTX3Q5HYI7 312 aa17.99■□□□□ 0.47
PHF1-201ENST00000374512 GNASQ5JWF2 1037 aa17.99■□□□□ 0.47
PHF1-201ENST00000374512 ARTNQ5T4W7 220 aa17.99■□□□□ 0.47
PHF1-201ENST00000374512 INTS11Q5TA45 600 aaKnown RBP17.99■□□□□ 0.47
PHF1-201ENST00000374512 ERMP1Q7Z2K6 904 aa17.99■□□□□ 0.47
PHF1-201ENST00000374512 MFSD2AQ8NA29 543 aa17.99■□□□□ 0.47
PHF1-201ENST00000374512 TCF12Q99081 682 aa17.99■□□□□ 0.47
PHF1-201ENST00000374512 GPATCH1Q9BRR8 931 aaKnown RBP17.99■□□□□ 0.47
PHF1-201ENST00000374512 ERVK-6Q9BXR3 956 aa17.99■□□□□ 0.47
PHF1-201ENST00000374512 OCEL1Q9H607 264 aa17.99■□□□□ 0.47
PHF1-201ENST00000374512 CLK4Q9HAZ1 481 aaKnown RBP17.99■□□□□ 0.47
PHF1-201ENST00000374512 CCM2LQ9NUG4 571 aaPredicted RBP17.99■□□□□ 0.47
PHF1-201ENST00000374512 OLAHQ9NV23 265 aa17.99■□□□□ 0.47
PHF1-201ENST00000374512 ABCD2Q9UBJ2 740 aa17.99■□□□□ 0.47
PHF1-201ENST00000374512 TDRD15B5MCY1 1934 aaKnown RBP17.98■□□□□ 0.47
PHF1-201ENST00000374512 CSPG5O95196 566 aa17.98■□□□□ 0.47
PHF1-201ENST00000374512 BMP10O95393 424 aa17.98■□□□□ 0.47
PHF1-201ENST00000374512 GPX3P22352 226 aa17.98■□□□□ 0.47
PHF1-201ENST00000374512 SLC5A2P31639 672 aa17.98■□□□□ 0.47
PHF1-201ENST00000374512 BNIP2Q12982 314 aa17.98■□□□□ 0.47
PHF1-201ENST00000374512 CYTH1Q15438 398 aa17.98■□□□□ 0.47
PHF1-201ENST00000374512 PAN2Q504Q3 1202 aaKnown RBP17.98■□□□□ 0.47
PHF1-201ENST00000374512 NHSL2Q5HYW2 709 aa17.98■□□□□ 0.47
PHF1-201ENST00000374512 GDF6Q6KF10 455 aaPredicted RBP17.98■□□□□ 0.47
PHF1-201ENST00000374512 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.98■□□□□ 0.47
PHF1-201ENST00000374512 PHF21BQ96EK2 531 aa17.98■□□□□ 0.47
PHF1-201ENST00000374512 PKMYT1Q99640 499 aa17.98■□□□□ 0.47
PHF1-201ENST00000374512 NOL11Q9H8H0 719 aaKnown RBP17.98■□□□□ 0.47
PHF1-201ENST00000374512 TMLHEQ9NVH6 421 aa17.98■□□□□ 0.47
PHF1-201ENST00000374512 NYNRINQ9P2P1 1898 aaKnown RBP17.98■□□□□ 0.47
PHF1-201ENST00000374512 PTPRDP23468 1912 aa17.98■□□□□ 0.47
PHF1-201ENST00000374512 MROH6A6NGR9 719 aa17.98■□□□□ 0.47
PHF1-201ENST00000374512 E9PAM4 449 aa17.98■□□□□ 0.47
PHF1-201ENST00000374512 H3BSA7 217 aa17.98■□□□□ 0.47
PHF1-201ENST00000374512 C7P10643 843 aa17.98■□□□□ 0.47
PHF1-201ENST00000374512 BRCC3P46736 316 aa17.98■□□□□ 0.47
PHF1-201ENST00000374512 SLC7A2P52569 658 aa17.98■□□□□ 0.47
PHF1-201ENST00000374512 NDST2P52849 883 aa17.98■□□□□ 0.47
PHF1-201ENST00000374512 ATP6V0D1P61421 351 aa17.98■□□□□ 0.47
PHF1-201ENST00000374512 HPCAP84074 193 aa17.98■□□□□ 0.47
PHF1-201ENST00000374512 UGT3A2Q3SY77 523 aa17.98■□□□□ 0.47
PHF1-201ENST00000374512 KCTD21Q4G0X4 260 aa17.98■□□□□ 0.47
PHF1-201ENST00000374512 ZNF789Q5FWF6 425 aa17.98■□□□□ 0.47
PHF1-201ENST00000374512 COQ5Q5HYK3 327 aa17.98■□□□□ 0.47
PHF1-201ENST00000374512 ZNF280DQ6N043 979 aa17.98■□□□□ 0.47
PHF1-201ENST00000374512 ISCA2Q86U28 154 aa17.98■□□□□ 0.47
PHF1-201ENST00000374512 CAMK1DQ8IU85 385 aa17.98■□□□□ 0.47
PHF1-201ENST00000374512 NUP93Q8N1F7 819 aa17.98■□□□□ 0.47
PHF1-201ENST00000374512 UMODL1-AS1Q8N2C9 162 aa17.98■□□□□ 0.47
PHF1-201ENST00000374512 MINDY1Q8N5J2 469 aa17.98■□□□□ 0.47
PHF1-201ENST00000374512 TRPV1Q8NER1 839 aa17.98■□□□□ 0.47
PHF1-201ENST00000374512 OR13J1Q8NGT2 312 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms