RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 SPTLC3Q9NUV7 552 aa18.04■□□□□ 0.48
TRAPPC3-202ENST00000373162 CLCA2Q9UQC9 943 aa18.04■□□□□ 0.48
TRAPPC3-202ENST00000373162 IGSF10Q6WRI0 2623 aa18.04■□□□□ 0.48
TRAPPC3-202ENST00000373162 A0A087WV48 116 aa18.03■□□□□ 0.48
TRAPPC3-202ENST00000373162 TMEM202A6NGA9 273 aa18.03■□□□□ 0.48
TRAPPC3-202ENST00000373162 NPIPB15A6NHN6 443 aaPredicted RBP18.03■□□□□ 0.48
TRAPPC3-202ENST00000373162 MATN3O15232 486 aa18.03■□□□□ 0.48
TRAPPC3-202ENST00000373162 YY2O15391 372 aa18.03■□□□□ 0.48
TRAPPC3-202ENST00000373162 PCCBP05166 539 aa18.03■□□□□ 0.48
TRAPPC3-202ENST00000373162 KRT7P08729 469 aa18.03■□□□□ 0.48
TRAPPC3-202ENST00000373162 ELFN1P0C7U0 828 aa18.03■□□□□ 0.48
TRAPPC3-202ENST00000373162 KDELR1P24390 212 aa18.03■□□□□ 0.48
TRAPPC3-202ENST00000373162 VIPR1P32241 457 aa18.03■□□□□ 0.48
TRAPPC3-202ENST00000373162 DUSP3P51452 185 aaPredicted RBP18.03■□□□□ 0.48
TRAPPC3-202ENST00000373162 PTPRRQ15256 657 aa18.03■□□□□ 0.48
TRAPPC3-202ENST00000373162 PLD5Q8N7P1 536 aa18.03■□□□□ 0.48
TRAPPC3-202ENST00000373162 RNF214Q8ND24 703 aa18.03■□□□□ 0.48
TRAPPC3-202ENST00000373162 SLC35G2Q8TBE7 412 aa18.03■□□□□ 0.48
TRAPPC3-202ENST00000373162 IFI44Q8TCB0 444 aa18.03■□□□□ 0.48
TRAPPC3-202ENST00000373162 OR1E3Q8WZA6 343 aa18.03■□□□□ 0.48
TRAPPC3-202ENST00000373162 TSACCQ96A04 125 aaPredicted RBP18.03■□□□□ 0.48
TRAPPC3-202ENST00000373162 HDAC11Q96DB2 347 aa18.03■□□□□ 0.48
TRAPPC3-202ENST00000373162 SCRN2Q96FV2 425 aa18.03■□□□□ 0.48
TRAPPC3-202ENST00000373162 WDR92Q96MX6 357 aa18.03■□□□□ 0.48
TRAPPC3-202ENST00000373162 RBM15Q96T37 977 aaKnown RBP eCLIP18.03■□□□□ 0.48
TRAPPC3-202ENST00000373162 NHEJ1Q9H9Q4 299 aaPredicted RBP18.03■□□□□ 0.48
TRAPPC3-202ENST00000373162 SCUBE2Q9NQ36 999 aa18.03■□□□□ 0.48
TRAPPC3-202ENST00000373162 DTLQ9NZJ0 730 aa18.03■□□□□ 0.48
TRAPPC3-202ENST00000373162 AMACRQ9UHK6 382 aa18.03■□□□□ 0.48
TRAPPC3-202ENST00000373162 PHTF1Q9UMS5 762 aa18.03■□□□□ 0.48
TRAPPC3-202ENST00000373162 PSMD11O00231 422 aa18.02■□□□□ 0.48
TRAPPC3-202ENST00000373162 CASC3O15234 703 aaKnown RBP18.02■□□□□ 0.48
TRAPPC3-202ENST00000373162 TLX3O43711 291 aaPredicted RBP18.02■□□□□ 0.48
TRAPPC3-202ENST00000373162 RASGRP1O95267 797 aa18.02■□□□□ 0.48
TRAPPC3-202ENST00000373162 MAP3K6O95382 1288 aa18.02■□□□□ 0.48
TRAPPC3-202ENST00000373162 PRLP01236 227 aa18.02■□□□□ 0.48
TRAPPC3-202ENST00000373162 PDHA1P08559 390 aa18.02■□□□□ 0.48
TRAPPC3-202ENST00000373162 CCNCP24863 283 aa18.02■□□□□ 0.48
TRAPPC3-202ENST00000373162 SRP54P61011 504 aaKnown RBP18.02■□□□□ 0.48
TRAPPC3-202ENST00000373162 IFI16Q16666 785 aaKnown RBP18.02■□□□□ 0.48
TRAPPC3-202ENST00000373162 HS1BP3Q53T59 392 aa18.02■□□□□ 0.48
TRAPPC3-202ENST00000373162 PERM1Q5SV97 790 aa18.02■□□□□ 0.48
TRAPPC3-202ENST00000373162 SLC9A4Q6AI14 798 aa18.02■□□□□ 0.48
TRAPPC3-202ENST00000373162 LVRNQ6Q4G3 990 aa18.02■□□□□ 0.48
TRAPPC3-202ENST00000373162 SDR16C5Q8N3Y7 309 aa18.02■□□□□ 0.48
TRAPPC3-202ENST00000373162 FSTL5Q8N475 847 aaPredicted RBP18.02■□□□□ 0.48
TRAPPC3-202ENST00000373162 DTD2Q96FN9 168 aa18.02■□□□□ 0.48
TRAPPC3-202ENST00000373162 RNF157Q96PX1 679 aa18.02■□□□□ 0.48
TRAPPC3-202ENST00000373162 LGR4Q9BXB1 951 aa18.02■□□□□ 0.48
TRAPPC3-202ENST00000373162 NT5MQ9NPB1 228 aa18.02■□□□□ 0.48
TRAPPC3-202ENST00000373162 NCKIPSDQ9NZQ3 722 aa18.02■□□□□ 0.48
TRAPPC3-202ENST00000373162 PCDHB1Q9Y5F3 818 aa18.02■□□□□ 0.48
TRAPPC3-202ENST00000373162 URB1O60287 2271 aaKnown RBP18.02■□□□□ 0.47
TRAPPC3-202ENST00000373162 A0A1W2PNU3 283 aaPredicted RBP18.01■□□□□ 0.47
TRAPPC3-202ENST00000373162 TNFRSF10CO14798 259 aa18.01■□□□□ 0.47
TRAPPC3-202ENST00000373162 AKR1B10O60218 316 aa18.01■□□□□ 0.47
TRAPPC3-202ENST00000373162 SOD1P00441 154 aa18.01■□□□□ 0.47
TRAPPC3-202ENST00000373162 TGM2P21980 687 aa18.01■□□□□ 0.47
TRAPPC3-202ENST00000373162 TEAD1P28347 426 aa18.01■□□□□ 0.47
TRAPPC3-202ENST00000373162 GJC1P36383 396 aa18.01■□□□□ 0.47
TRAPPC3-202ENST00000373162 BLKP51451 505 aa18.01■□□□□ 0.47
TRAPPC3-202ENST00000373162 PDX1P52945 283 aa18.01■□□□□ 0.47
TRAPPC3-202ENST00000373162 NIPAL4Q0D2K0 466 aa18.01■□□□□ 0.47
TRAPPC3-202ENST00000373162 CDKN3Q16667 212 aa18.01■□□□□ 0.47
TRAPPC3-202ENST00000373162 FAXCQ5TGI0 409 aa18.01■□□□□ 0.47
TRAPPC3-202ENST00000373162 PNCKQ6P2M8 343 aa18.01■□□□□ 0.47
TRAPPC3-202ENST00000373162 HSD11B1LQ7Z5J1 315 aa18.01■□□□□ 0.47
TRAPPC3-202ENST00000373162 TECPR1Q7Z6L1 1165 aa18.01■□□□□ 0.47
TRAPPC3-202ENST00000373162 TSPAN33Q86UF1 283 aa18.01■□□□□ 0.47
TRAPPC3-202ENST00000373162 BBS5Q8N3I7 341 aa18.01■□□□□ 0.47
TRAPPC3-202ENST00000373162 TC2NQ8N9U0 490 aa18.01■□□□□ 0.47
TRAPPC3-202ENST00000373162 KCTD6Q8NC69 237 aa18.01■□□□□ 0.47
TRAPPC3-202ENST00000373162 SMIM14Q96QK8 99 aa18.01■□□□□ 0.47
TRAPPC3-202ENST00000373162 IL12RB2Q99665 862 aa18.01■□□□□ 0.47
TRAPPC3-202ENST00000373162 SEMA3CQ99985 751 aa18.01■□□□□ 0.47
TRAPPC3-202ENST00000373162 TEX101Q9BY14 249 aa18.01■□□□□ 0.47
TRAPPC3-202ENST00000373162 SLC13A1Q9BZW2 595 aa18.01■□□□□ 0.47
TRAPPC3-202ENST00000373162 INTUQ9ULD6 942 aa18.01■□□□□ 0.47
TRAPPC3-202ENST00000373162 RAI2Q9Y5P3 530 aa18.01■□□□□ 0.47
TRAPPC3-202ENST00000373162 A8MX80 341 aa18■□□□□ 0.47
TRAPPC3-202ENST00000373162 LCA5LO95447 670 aa18■□□□□ 0.47
TRAPPC3-202ENST00000373162 FUCA1P04066 466 aa18■□□□□ 0.47
TRAPPC3-202ENST00000373162 HLA-DQB2P05538 268 aa18■□□□□ 0.47
TRAPPC3-202ENST00000373162 MMP2P08253 660 aa18■□□□□ 0.47
TRAPPC3-202ENST00000373162 ARHGAP25P42331 645 aa18■□□□□ 0.47
TRAPPC3-202ENST00000373162 SSR1P43307 286 aaKnown RBP18■□□□□ 0.47
TRAPPC3-202ENST00000373162 HADHBP55084 474 aaKnown RBP18■□□□□ 0.47
TRAPPC3-202ENST00000373162 DSC2Q02487 901 aa18■□□□□ 0.47
TRAPPC3-202ENST00000373162 MESDQ14696 234 aa18■□□□□ 0.47
TRAPPC3-202ENST00000373162 NR0B2Q15466 257 aa18■□□□□ 0.47
TRAPPC3-202ENST00000373162 TAZQ16635 292 aa18■□□□□ 0.47
TRAPPC3-202ENST00000373162 LRRC38Q5VT99 294 aa18■□□□□ 0.47
TRAPPC3-202ENST00000373162 TIGD7Q6NT04 549 aaPredicted RBP18■□□□□ 0.47
TRAPPC3-202ENST00000373162 ENPP7Q6UWV6 458 aa18■□□□□ 0.47
TRAPPC3-202ENST00000373162 EFL1Q7Z2Z2 1120 aaKnown RBP18■□□□□ 0.47
TRAPPC3-202ENST00000373162 HID1Q8IV36 788 aa18■□□□□ 0.47
TRAPPC3-202ENST00000373162 MAP7D3Q8IWC1 876 aa18■□□□□ 0.47
TRAPPC3-202ENST00000373162 RHOT2Q8IXI1 618 aa18■□□□□ 0.47
TRAPPC3-202ENST00000373162 CNTD1Q8N815 330 aa18■□□□□ 0.47
TRAPPC3-202ENST00000373162 OR56A4Q8NGH8 313 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms