RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 STK19P49842 368 aaPredicted RBP12.11□□□□□ -0.47
USF1-203ENST00000368021 DNAJC3Q13217 504 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 SEPT6Q14141 434 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 GALNT3Q14435 633 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 CNGA3Q16281 694 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 DGKKQ5KSL6 1271 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 ATXN7L2Q5T6C5 722 aaPredicted RBP12.11□□□□□ -0.47
USF1-203ENST00000368021 ESRP1Q6NXG1 681 aaKnown RBP12.11□□□□□ -0.47
USF1-203ENST00000368021 C22orf39Q6P5X5 142 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 PACS1Q6VY07 963 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 CCDC121Q6ZUS5 278 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 TRIM74Q86UV6 250 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 TRIM73Q86UV7 250 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 NAT16Q8N8M0 369 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 SPOCK2Q92563 424 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 NXPE3Q969Y0 559 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 ELSPBP1Q96BH3 223 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 ZFYVE19Q96K21 471 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 RPL10LQ96L21 214 aaKnown RBP12.11□□□□□ -0.47
USF1-203ENST00000368021 TUBGCP5Q96RT8 1024 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 SMC6Q96SB8 1091 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 EBF3Q9H4W6 596 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 ECT2Q9H8V3 914 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.11□□□□□ -0.47
USF1-203ENST00000368021 TXNDC16Q9P2K2 825 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 DUSP12Q9UNI6 340 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 SMG5Q9UPR3 1016 aaKnown RBP12.11□□□□□ -0.47
USF1-203ENST00000368021 TRAFD1O14545 582 aaPredicted RBP12.11□□□□□ -0.47
USF1-203ENST00000368021 PRPF4O43172 522 aaKnown RBP eCLIP12.11□□□□□ -0.47
USF1-203ENST00000368021 UGT1A9O60656 530 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 TULP3O75386 442 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 CRTAMO95727 393 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 ASLP04424 464 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 ARSAP15289 507 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 CREB1P16220 341 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 PSMC3P17980 439 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 ARNTP27540 789 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 GDI1P31150 447 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 MDH1P40925 334 aaKnown RBP12.11□□□□□ -0.47
USF1-203ENST00000368021 GNGT1P63211 74 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 ACVR1Q04771 509 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 GRM3Q14832 879 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 HSP90AA5PQ58FG0 334 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 IER5LQ5T953 404 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 GRTP1Q5TC63 336 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 TMEM215Q68D42 235 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 TIFABQ6ZNK6 161 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 OR13J1Q8NGT2 312 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 GABPB2Q8TAK5 448 aaPredicted RBP12.11□□□□□ -0.47
USF1-203ENST00000368021 RMDN1Q96DB5 314 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 TRMT61BQ9BVS5 477 aaKnown RBP12.11□□□□□ -0.47
USF1-203ENST00000368021 CPEB1Q9BZB8 566 aaKnown RBP12.11□□□□□ -0.47
USF1-203ENST00000368021 EPN3Q9H201 632 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 ATP13A3Q9H7F0 1226 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 BRD9Q9H8M2 597 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 UGT1A7Q9HAW7 530 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 UGT1A10Q9HAW8 530 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 UGT1A8Q9HAW9 530 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 IL1RAPL1Q9NZN1 696 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 ITGB1BP2Q9UKP3 347 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 FBXL21Q9UKT6 434 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 CA14Q9ULX7 337 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 TECTAO75443 2155 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 A0A1W2PPM1 405 aa12.1□□□□□ -0.47
USF1-203ENST00000368021 TMEM120BA0PK00 339 aa12.1□□□□□ -0.47
USF1-203ENST00000368021 FOXO6A8MYZ6 492 aa12.1□□□□□ -0.47
USF1-203ENST00000368021 TRIM49D1C9J1S8 452 aa12.1□□□□□ -0.47
USF1-203ENST00000368021 SLC7A4O43246 635 aa12.1□□□□□ -0.47
USF1-203ENST00000368021 VAPBO95292 243 aa12.1□□□□□ -0.47
USF1-203ENST00000368021 PGLSO95336 258 aa12.1□□□□□ -0.47
USF1-203ENST00000368021 PDGFBP01127 241 aaPredicted RBP12.1□□□□□ -0.47
USF1-203ENST00000368021 MT-ND3P03897 115 aa12.1□□□□□ -0.47
USF1-203ENST00000368021 ATP5BP06576 529 aaKnown RBP12.1□□□□□ -0.47
USF1-203ENST00000368021 SRPRAP08240 638 aaKnown RBP12.1□□□□□ -0.47
USF1-203ENST00000368021 PDHA1P08559 390 aa12.1□□□□□ -0.47
USF1-203ENST00000368021 SRFP11831 508 aa12.1□□□□□ -0.47
USF1-203ENST00000368021 KRT4P19013 534 aa12.1□□□□□ -0.47
USF1-203ENST00000368021 PSMA3P25788 255 aa12.1□□□□□ -0.47
USF1-203ENST00000368021 GRIA4P48058 902 aa12.1□□□□□ -0.47
USF1-203ENST00000368021 CSE1LP55060 971 aaKnown RBP12.1□□□□□ -0.47
USF1-203ENST00000368021 BCL2L1Q07817 233 aa12.1□□□□□ -0.47
USF1-203ENST00000368021 DLG2Q15700 870 aa12.1□□□□□ -0.47
USF1-203ENST00000368021 UGP2Q16851 508 aa12.1□□□□□ -0.47
USF1-203ENST00000368021 GEN1Q17RS7 908 aa12.1□□□□□ -0.47
USF1-203ENST00000368021 GAB4Q2WGN9 574 aa12.1□□□□□ -0.47
USF1-203ENST00000368021 ARMC12Q5T9G4 340 aa12.1□□□□□ -0.47
USF1-203ENST00000368021 CWF19L1Q69YN2 538 aaKnown RBP12.1□□□□□ -0.47
USF1-203ENST00000368021 CYB5D1Q6P9G0 228 aa12.1□□□□□ -0.47
USF1-203ENST00000368021 TRIM67Q6ZTA4 783 aa12.1□□□□□ -0.47
USF1-203ENST00000368021 SH2D5Q6ZV89 423 aa12.1□□□□□ -0.47
USF1-203ENST00000368021 LMNTD2Q8IXW0 634 aa12.1□□□□□ -0.47
USF1-203ENST00000368021 YAF2Q8IY57 180 aa12.1□□□□□ -0.47
USF1-203ENST00000368021 UBALD2Q8IYN6 164 aa12.1□□□□□ -0.47
USF1-203ENST00000368021 CPA6Q8N4T0 437 aa12.1□□□□□ -0.47
USF1-203ENST00000368021 TTC8Q8TAM2 541 aa12.1□□□□□ -0.47
USF1-203ENST00000368021 CALML6Q8TD86 181 aa12.1□□□□□ -0.47
USF1-203ENST00000368021 BLOC1S5Q8TDH9 187 aa12.1□□□□□ -0.47
USF1-203ENST00000368021 STYXQ8WUJ0 223 aa12.1□□□□□ -0.47
USF1-203ENST00000368021 CENPTQ96BT3 561 aa12.1□□□□□ -0.47
USF1-203ENST00000368021 SELENOSQ9BQE4 189 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms