RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 DCUN1D2Q6PH85 259 aa11.62□□□□□ -0.55
PRPF40B-212ENST00000551111 LIPIQ6XZB0 460 aa11.62□□□□□ -0.55
PRPF40B-212ENST00000551111 CLEC14AQ86T13 490 aa11.62□□□□□ -0.55
PRPF40B-212ENST00000551111 ZNF605Q86T29 641 aa11.62□□□□□ -0.55
PRPF40B-212ENST00000551111 ARL10Q8N8L6 244 aa11.62□□□□□ -0.55
PRPF40B-212ENST00000551111 Q8N9G6 341 aaPredicted RBP11.62□□□□□ -0.55
PRPF40B-212ENST00000551111 LSM14AQ8ND56 463 aaKnown RBP11.62□□□□□ -0.55
PRPF40B-212ENST00000551111 TPCN2Q8NHX9 752 aa11.62□□□□□ -0.55
PRPF40B-212ENST00000551111 WDR36Q8NI36 951 aaKnown RBP11.62□□□□□ -0.55
PRPF40B-212ENST00000551111 PTCD2Q8WV60 388 aaKnown RBP11.62□□□□□ -0.55
PRPF40B-212ENST00000551111 SNRNP27Q8WVK2 155 aaKnown RBP11.62□□□□□ -0.55
PRPF40B-212ENST00000551111 NAT6Q93015 286 aa11.62□□□□□ -0.55
PRPF40B-212ENST00000551111 WDR92Q96MX6 357 aa11.62□□□□□ -0.55
PRPF40B-212ENST00000551111 C1QTNF7Q9BXJ2 289 aa11.62□□□□□ -0.55
PRPF40B-212ENST00000551111 DPH1Q9BZG8 443 aa11.62□□□□□ -0.55
PRPF40B-212ENST00000551111 TMEM168Q9H0V1 697 aa11.62□□□□□ -0.55
PRPF40B-212ENST00000551111 EPB41L5Q9HCM4 733 aa11.62□□□□□ -0.55
PRPF40B-212ENST00000551111 ETNK2Q9NVF9 386 aa11.62□□□□□ -0.55
PRPF40B-212ENST00000551111 NCKIPSDQ9NZQ3 722 aa11.62□□□□□ -0.55
PRPF40B-212ENST00000551111 KLQ9UEF7 1012 aa11.62□□□□□ -0.55
PRPF40B-212ENST00000551111 DOLKQ9UPQ8 538 aa11.62□□□□□ -0.55
PRPF40B-212ENST00000551111 ATP8A1Q9Y2Q0 1164 aa11.62□□□□□ -0.55
PRPF40B-212ENST00000551111 CCDC187A0A096LP49 1063 aa11.61□□□□□ -0.55
PRPF40B-212ENST00000551111 D6RAR5 112 aa11.61□□□□□ -0.55
PRPF40B-212ENST00000551111 K7ENP7 123 aa11.61□□□□□ -0.55
PRPF40B-212ENST00000551111 EEF2KO00418 725 aaKnown RBP11.61□□□□□ -0.55
PRPF40B-212ENST00000551111 TRAFD1O14545 582 aaPredicted RBP11.61□□□□□ -0.55
PRPF40B-212ENST00000551111 FGF10O15520 208 aaPredicted RBP11.61□□□□□ -0.55
PRPF40B-212ENST00000551111 PALMO75781 387 aa11.61□□□□□ -0.55
PRPF40B-212ENST00000551111 RASGRP1O95267 797 aa11.61□□□□□ -0.55
PRPF40B-212ENST00000551111 RPLP0P05388 317 aaKnown RBP11.61□□□□□ -0.55
PRPF40B-212ENST00000551111 PSMA2P25787 234 aa11.61□□□□□ -0.55
PRPF40B-212ENST00000551111 MIPP30301 263 aa11.61□□□□□ -0.55
PRPF40B-212ENST00000551111 SLC5A2P31639 672 aa11.61□□□□□ -0.55
PRPF40B-212ENST00000551111 UGT1A5P35504 534 aa11.61□□□□□ -0.55
PRPF40B-212ENST00000551111 ETV5P41161 510 aa11.61□□□□□ -0.55
PRPF40B-212ENST00000551111 RPIAP49247 311 aa11.61□□□□□ -0.55
PRPF40B-212ENST00000551111 NDST2P52849 883 aa11.61□□□□□ -0.55
PRPF40B-212ENST00000551111 MYL5Q02045 173 aa11.61□□□□□ -0.55
PRPF40B-212ENST00000551111 AGERQ15109 404 aa11.61□□□□□ -0.55
PRPF40B-212ENST00000551111 ELOCQ15369 112 aa11.61□□□□□ -0.55
PRPF40B-212ENST00000551111 ZSCAN23Q3MJ62 389 aa11.61□□□□□ -0.55
PRPF40B-212ENST00000551111 ERMARDQ5T6L9 678 aa11.61□□□□□ -0.55
PRPF40B-212ENST00000551111 PLEKHA7Q6IQ23 1121 aa11.61□□□□□ -0.55
PRPF40B-212ENST00000551111 INO80CQ6PI98 192 aaPredicted RBP11.61□□□□□ -0.55
PRPF40B-212ENST00000551111 PGBD5Q8N414 524 aa11.61□□□□□ -0.55
PRPF40B-212ENST00000551111 FSTL5Q8N475 847 aaPredicted RBP11.61□□□□□ -0.55
PRPF40B-212ENST00000551111 GPR156Q8NFN8 814 aa11.61□□□□□ -0.55
PRPF40B-212ENST00000551111 HCAR2Q8TDS4 363 aa11.61□□□□□ -0.55
PRPF40B-212ENST00000551111 GLMNQ92990 594 aa11.61□□□□□ -0.55
PRPF40B-212ENST00000551111 ECHDC3Q96DC8 303 aa11.61□□□□□ -0.55
PRPF40B-212ENST00000551111 ZNF641Q96N77 438 aaPredicted RBP11.61□□□□□ -0.55
PRPF40B-212ENST00000551111 SMIM14Q96QK8 99 aa11.61□□□□□ -0.55
PRPF40B-212ENST00000551111 RBM15Q96T37 977 aaKnown RBP eCLIP11.61□□□□□ -0.55
PRPF40B-212ENST00000551111 ST14Q9Y5Y6 855 aa11.61□□□□□ -0.55
PRPF40B-212ENST00000551111 TMEM191CA6NGB0 347 aa11.6□□□□□ -0.55
PRPF40B-212ENST00000551111 TMEM110-MUSTN1A8MSY1 372 aa11.6□□□□□ -0.55
PRPF40B-212ENST00000551111 DFFAO00273 331 aa11.6□□□□□ -0.55
PRPF40B-212ENST00000551111 TOR1BO14657 336 aa11.6□□□□□ -0.55
PRPF40B-212ENST00000551111 PLD2O14939 933 aa11.6□□□□□ -0.55
PRPF40B-212ENST00000551111 TPM2P07951 284 aa11.6□□□□□ -0.55
PRPF40B-212ENST00000551111 ITIH1P19827 911 aa11.6□□□□□ -0.55
PRPF40B-212ENST00000551111 CDK11BP21127 795 aaKnown RBP11.6□□□□□ -0.55
PRPF40B-212ENST00000551111 TNFAIP3P21580 790 aa11.6□□□□□ -0.55
PRPF40B-212ENST00000551111 IL1R2P27930 398 aa11.6□□□□□ -0.55
PRPF40B-212ENST00000551111 SCNN1BP51168 640 aa11.6□□□□□ -0.55
PRPF40B-212ENST00000551111 BLKP51451 505 aa11.6□□□□□ -0.55
PRPF40B-212ENST00000551111 AIF1P55008 147 aa11.6□□□□□ -0.55
PRPF40B-212ENST00000551111 RHDQ02161 417 aa11.6□□□□□ -0.55
PRPF40B-212ENST00000551111 SLC10A7Q0GE19 358 aa11.6□□□□□ -0.55
PRPF40B-212ENST00000551111 MTM1Q13496 603 aa11.6□□□□□ -0.55
PRPF40B-212ENST00000551111 PPP6R3Q5H9R7 873 aaPredicted RBP11.6□□□□□ -0.55
PRPF40B-212ENST00000551111 BRAT1Q6PJG6 821 aa11.6□□□□□ -0.55
PRPF40B-212ENST00000551111 OGFOD3Q6PK18 319 aa11.6□□□□□ -0.55
PRPF40B-212ENST00000551111 LVRNQ6Q4G3 990 aa11.6□□□□□ -0.55
PRPF40B-212ENST00000551111 RFLNAQ6ZTI6 216 aa11.6□□□□□ -0.55
PRPF40B-212ENST00000551111 RFX8Q6ZV50 586 aa11.6□□□□□ -0.55
PRPF40B-212ENST00000551111 RAB11FIP2Q7L804 512 aa11.6□□□□□ -0.55
PRPF40B-212ENST00000551111 ZNF571Q7Z3V5 609 aaPredicted RBP11.6□□□□□ -0.55
PRPF40B-212ENST00000551111 FBXO39Q8N4B4 442 aa11.6□□□□□ -0.55
PRPF40B-212ENST00000551111 AOPEPQ8N6M6 819 aa11.6□□□□□ -0.55
PRPF40B-212ENST00000551111 FAM46DQ8NEK8 389 aa11.6□□□□□ -0.55
PRPF40B-212ENST00000551111 GRAMD1AQ96CP6 724 aa11.6□□□□□ -0.55
PRPF40B-212ENST00000551111 LIN37Q96GY3 246 aaPredicted RBP11.6□□□□□ -0.55
PRPF40B-212ENST00000551111 GFM1Q96RP9 751 aaKnown RBP11.6□□□□□ -0.55
PRPF40B-212ENST00000551111 LRRN3Q9H3W5 708 aa11.6□□□□□ -0.55
PRPF40B-212ENST00000551111 HAUS4Q9H6D7 363 aa11.6□□□□□ -0.55
PRPF40B-212ENST00000551111 SUDS3Q9H7L9 328 aaPredicted RBP11.6□□□□□ -0.55
PRPF40B-212ENST00000551111 WDR70Q9NW82 654 aa11.6□□□□□ -0.55
PRPF40B-212ENST00000551111 CWC15Q9P013 229 aaKnown RBP11.6□□□□□ -0.55
PRPF40B-212ENST00000551111 PCDHGC4Q9Y5F7 938 aa11.6□□□□□ -0.55
PRPF40B-212ENST00000551111 DGKBQ9Y6T7 804 aa11.6□□□□□ -0.55
PRPF40B-212ENST00000551111 RNF215Q9Y6U7 377 aa11.6□□□□□ -0.55
PRPF40B-212ENST00000551111 ANKRD62A6NC57 917 aa11.59□□□□□ -0.55
PRPF40B-212ENST00000551111 ARHGAP42A6NI28 874 aa11.59□□□□□ -0.55
PRPF40B-212ENST00000551111 LRRC53A6NM62 1247 aa11.59□□□□□ -0.55
PRPF40B-212ENST00000551111 CYSRT1A8MQ03 144 aa11.59□□□□□ -0.55
PRPF40B-212ENST00000551111 DDX3XO00571 662 aaKnown RBP eCLIP11.59□□□□□ -0.55
PRPF40B-212ENST00000551111 B4GAT1O43505 415 aa11.59□□□□□ -0.55
PRPF40B-212ENST00000551111 PEX11BO96011 259 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms