RNA–Protein interactions for RNA: ENST00000530085.2

RDX-208, Transcript of radixin, human

TSL 3

Gene RDX, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-208	ENST00000530085	GIMAP4	Q9NUV9	329 aa		4.09	□□□□□ -1.75
RDX-208	ENST00000530085	MRPL15	Q9P015	296 aa	Known RBP	4.09	□□□□□ -1.75
RDX-208	ENST00000530085	NFE2L3	Q9Y4A8	694 aa		4.09	□□□□□ -1.75
RDX-208	ENST00000530085		A0A0G2JK05	382 aa		4.08	□□□□□ -1.76
RDX-208	ENST00000530085	SMIM35	A0A1B0GVV1	85 aa		4.08	□□□□□ -1.76
RDX-208	ENST00000530085	OR2A25	A4D2G3	310 aa		4.08	□□□□□ -1.76
RDX-208	ENST00000530085	WIPF3	A6NGB9	483 aa		4.08	□□□□□ -1.76
RDX-208	ENST00000530085		A8MV72	311 aa	Predicted RBP	4.08	□□□□□ -1.76
RDX-208	ENST00000530085	STMND1	H3BQB6	276 aa		4.08	□□□□□ -1.76
RDX-208	ENST00000530085	ADAM20	O43506	726 aa		4.08	□□□□□ -1.76
RDX-208	ENST00000530085	TLX3	O43711	291 aa	Predicted RBP	4.08	□□□□□ -1.76
RDX-208	ENST00000530085	HS6ST1	O60243	411 aa		4.08	□□□□□ -1.76
RDX-208	ENST00000530085	BCAR3	O75815	825 aa		4.08	□□□□□ -1.76
RDX-208	ENST00000530085	TUBB	P07437	444 aa		4.08	□□□□□ -1.76
RDX-208	ENST00000530085	TFPI	P10646	304 aa		4.08	□□□□□ -1.76
RDX-208	ENST00000530085	MPG	P29372	298 aa		4.08	□□□□□ -1.76
RDX-208	ENST00000530085	DCTD	P32321	178 aa		4.08	□□□□□ -1.76
RDX-208	ENST00000530085	PIK3CA	P42336	1068 aa		4.08	□□□□□ -1.76
RDX-208	ENST00000530085	SLC15A1	P46059	708 aa		4.08	□□□□□ -1.76
RDX-208	ENST00000530085	CAMP	P49913	170 aa		4.08	□□□□□ -1.76
RDX-208	ENST00000530085	PMS2	P54278	862 aa		4.08	□□□□□ -1.76
RDX-208	ENST00000530085	MFAP4	P55083	255 aa		4.08	□□□□□ -1.76
RDX-208	ENST00000530085	RRP1	P56182	461 aa	Known RBP	4.08	□□□□□ -1.76
RDX-208	ENST00000530085	TMPRSS3	P57727	454 aa		4.08	□□□□□ -1.76
RDX-208	ENST00000530085	ID2	Q02363	134 aa		4.08	□□□□□ -1.76
RDX-208	ENST00000530085	ZNF91	Q05481	1191 aa		4.08	□□□□□ -1.76
RDX-208	ENST00000530085	IK	Q13123	557 aa	Predicted RBP	4.08	□□□□□ -1.76
RDX-208	ENST00000530085	PCLAF	Q15004	111 aa		4.08	□□□□□ -1.76
RDX-208	ENST00000530085	ARHGEF6	Q15052	776 aa		4.08	□□□□□ -1.76
RDX-208	ENST00000530085	NAB2	Q15742	525 aa		4.08	□□□□□ -1.76
RDX-208	ENST00000530085	ADIPOQ	Q15848	244 aa		4.08	□□□□□ -1.76
RDX-208	ENST00000530085	NTRK2	Q16620	822 aa		4.08	□□□□□ -1.76
RDX-208	ENST00000530085	USP41	Q3LFD5	358 aa		4.08	□□□□□ -1.76
RDX-208	ENST00000530085	SOWAHC	Q53LP3	525 aa	Predicted RBP	4.08	□□□□□ -1.76
RDX-208	ENST00000530085	C6orf10	Q5SRN2	563 aa		4.08	□□□□□ -1.76
RDX-208	ENST00000530085	C6orf141	Q5SZD1	244 aa		4.08	□□□□□ -1.76
RDX-208	ENST00000530085	HEPHL1	Q6MZM0	1159 aa		4.08	□□□□□ -1.76
RDX-208	ENST00000530085	CRELD2	Q6UXH1	353 aa	Predicted RBP	4.08	□□□□□ -1.76
RDX-208	ENST00000530085	QSOX2	Q6ZRP7	698 aa		4.08	□□□□□ -1.76
RDX-208	ENST00000530085	ADGRA1	Q86SQ6	560 aa		4.08	□□□□□ -1.76
RDX-208	ENST00000530085	HAPLN4	Q86UW8	402 aa		4.08	□□□□□ -1.76
RDX-208	ENST00000530085	WDR63	Q8IWG1	891 aa		4.08	□□□□□ -1.76
RDX-208	ENST00000530085	PARP16	Q8N5Y8	322 aa		4.08	□□□□□ -1.76
RDX-208	ENST00000530085	HUS1B	Q8NHY5	278 aa		4.08	□□□□□ -1.76
RDX-208	ENST00000530085	CEP76	Q8TAP6	659 aa		4.08	□□□□□ -1.76
RDX-208	ENST00000530085	MSI2	Q96DH6	328 aa	Known RBP	4.08	□□□□□ -1.76
RDX-208	ENST00000530085	ELMOD3	Q96FG2	381 aa		4.08	□□□□□ -1.76
RDX-208	ENST00000530085	RADIL	Q96JH8	1075 aa		4.08	□□□□□ -1.76
RDX-208	ENST00000530085	SLC41A2	Q96JW4	573 aa		4.08	□□□□□ -1.76
RDX-208	ENST00000530085	SEPT5	Q99719	369 aa	Predicted RBP	4.08	□□□□□ -1.76
RDX-208	ENST00000530085	BAG1	Q99933	345 aa	Predicted RBP	4.08	□□□□□ -1.76
RDX-208	ENST00000530085	FAM110A	Q9BQ89	295 aa		4.08	□□□□□ -1.76
RDX-208	ENST00000530085	NPFFR1	Q9GZQ6	430 aa		4.08	□□□□□ -1.76
RDX-208	ENST00000530085	LHPP	Q9H008	270 aa		4.08	□□□□□ -1.76
RDX-208	ENST00000530085	R3HDML	Q9H3Y0	253 aa		4.08	□□□□□ -1.76
RDX-208	ENST00000530085	ZCCHC17	Q9NP64	241 aa	Known RBP	4.08	□□□□□ -1.76
RDX-208	ENST00000530085	TMEM184C	Q9NVA4	438 aa		4.08	□□□□□ -1.76
RDX-208	ENST00000530085	SETD4	Q9NVD3	440 aa		4.08	□□□□□ -1.76
RDX-208	ENST00000530085	OGFR	Q9NZT2	677 aa		4.08	□□□□□ -1.76
RDX-208	ENST00000530085	CFDP1	Q9UEE9	299 aa	Predicted RBP	4.08	□□□□□ -1.76
RDX-208	ENST00000530085	SEC63	Q9UGP8	760 aa	Known RBP	4.08	□□□□□ -1.76
RDX-208	ENST00000530085	TTBK1	Q5TCY1	1321 aa	Predicted RBP	4.07	□□□□□ -1.76
RDX-208	ENST00000530085		A0A1W2PPC1	479 aa		4.07	□□□□□ -1.76
RDX-208	ENST00000530085		A6NNC1	897 aa		4.07	□□□□□ -1.76
RDX-208	ENST00000530085	ZNF814	B7Z6K7	855 aa		4.07	□□□□□ -1.76
RDX-208	ENST00000530085		H7C0S8	307 aa		4.07	□□□□□ -1.76
RDX-208	ENST00000530085	TLR2	O60603	784 aa		4.07	□□□□□ -1.76
RDX-208	ENST00000530085	ATG13	O75143	517 aa		4.07	□□□□□ -1.76
RDX-208	ENST00000530085	MTA2	O94776	668 aa		4.07	□□□□□ -1.76
RDX-208	ENST00000530085	CSPG5	O95196	566 aa		4.07	□□□□□ -1.76
RDX-208	ENST00000530085	CLDN7	O95471	211 aa		4.07	□□□□□ -1.76
RDX-208	ENST00000530085	MMP2	P08253	660 aa		4.07	□□□□□ -1.76
RDX-208	ENST00000530085	CHRNB1	P11230	501 aa		4.07	□□□□□ -1.76
RDX-208	ENST00000530085	HOXD9	P28356	352 aa	Predicted RBP	4.07	□□□□□ -1.76
RDX-208	ENST00000530085	AVPR1A	P37288	418 aa		4.07	□□□□□ -1.76
RDX-208	ENST00000530085	NRIP1	P48552	1158 aa		4.07	□□□□□ -1.76
RDX-208	ENST00000530085	CLCN3	P51790	818 aa		4.07	□□□□□ -1.76
RDX-208	ENST00000530085	MRPS5	P82675	430 aa	Known RBP	4.07	□□□□□ -1.76
RDX-208	ENST00000530085	SORD	Q00796	357 aa		4.07	□□□□□ -1.76
RDX-208	ENST00000530085	GAD2	Q05329	585 aa		4.07	□□□□□ -1.76
RDX-208	ENST00000530085	FAM27E3	Q08E93	113 aa		4.07	□□□□□ -1.76
RDX-208	ENST00000530085	CDC16	Q13042	620 aa		4.07	□□□□□ -1.76
RDX-208	ENST00000530085	TMEM266	Q2M3C6	531 aa		4.07	□□□□□ -1.76
RDX-208	ENST00000530085	SPECC1	Q5M775	1068 aa		4.07	□□□□□ -1.76
RDX-208	ENST00000530085	ZNF793	Q6ZN11	406 aa		4.07	□□□□□ -1.76
RDX-208	ENST00000530085	CFAP77	Q6ZQR2	320 aa		4.07	□□□□□ -1.76
RDX-208	ENST00000530085	TRIL	Q7L0X0	811 aa		4.07	□□□□□ -1.76
RDX-208	ENST00000530085	LINGO2	Q7L985	606 aa		4.07	□□□□□ -1.76
RDX-208	ENST00000530085	ANKRD23	Q86SG2	305 aa		4.07	□□□□□ -1.76
RDX-208	ENST00000530085	CAMK1D	Q8IU85	385 aa		4.07	□□□□□ -1.76
RDX-208	ENST00000530085	LINC00346	Q8IVM7	164 aa		4.07	□□□□□ -1.76
RDX-208	ENST00000530085	SLC35F3	Q8IY50	421 aa		4.07	□□□□□ -1.76
RDX-208	ENST00000530085	CCDC13	Q8IYE1	715 aa		4.07	□□□□□ -1.76
RDX-208	ENST00000530085	RNF168	Q8IYW5	571 aa	Predicted RBP	4.07	□□□□□ -1.76
RDX-208	ENST00000530085	ZBTB2	Q8N680	514 aa		4.07	□□□□□ -1.76
RDX-208	ENST00000530085	TEX45	Q8NA69	505 aa		4.07	□□□□□ -1.76
RDX-208	ENST00000530085	IL17RC	Q8NAC3	791 aa		4.07	□□□□□ -1.76
RDX-208	ENST00000530085	KCTD6	Q8NC69	237 aa		4.07	□□□□□ -1.76
RDX-208	ENST00000530085	HJURP	Q8NCD3	748 aa	Predicted RBP	4.07	□□□□□ -1.76
RDX-208	ENST00000530085	BEST2	Q8NFU1	509 aa		4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms