RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 LRRC37BQ96QE4 947 aa16.92■□□□□ 0.3
SREK1-212ENST00000522912 TMEM120AQ9BXJ8 343 aa16.92■□□□□ 0.3
SREK1-212ENST00000522912 ACOT9Q9Y305 439 aa16.92■□□□□ 0.3
SREK1-212ENST00000522912 C5orf67F2Z3F1 127 aa16.92■□□□□ 0.3
SREK1-212ENST00000522912 SMAD6O43541 496 aaKnown RBP16.92■□□□□ 0.3
SREK1-212ENST00000522912 RHOP08100 348 aa16.92■□□□□ 0.3
SREK1-212ENST00000522912 SBK3P0C264 359 aa16.92■□□□□ 0.3
SREK1-212ENST00000522912 COL6A2P12110 1019 aa16.92■□□□□ 0.3
SREK1-212ENST00000522912 CRABP2P29373 138 aa16.92■□□□□ 0.3
SREK1-212ENST00000522912 ARRB2P32121 409 aa16.92■□□□□ 0.3
SREK1-212ENST00000522912 CD70P32970 193 aa16.92■□□□□ 0.3
SREK1-212ENST00000522912 ZNF140P52738 457 aaPredicted RBP16.92■□□□□ 0.3
SREK1-212ENST00000522912 ITGA9Q13797 1035 aa16.92■□□□□ 0.3
SREK1-212ENST00000522912 SLC5A9Q2M3M2 681 aa16.92■□□□□ 0.3
SREK1-212ENST00000522912 HSF5Q4G112 596 aaPredicted RBP16.92■□□□□ 0.3
SREK1-212ENST00000522912 ARID3BQ8IVW6 561 aaPredicted RBP16.92■□□□□ 0.3
SREK1-212ENST00000522912 CMTM8Q8IZV2 173 aa16.92■□□□□ 0.3
SREK1-212ENST00000522912 MICALL1Q8N3F8 863 aa16.92■□□□□ 0.3
SREK1-212ENST00000522912 FIBINQ8TAL6 211 aa16.92■□□□□ 0.3
SREK1-212ENST00000522912 ERP27Q96DN0 273 aa16.92■□□□□ 0.3
SREK1-212ENST00000522912 GPR78Q96P69 363 aa16.92■□□□□ 0.3
SREK1-212ENST00000522912 OLFM1Q99784 485 aa16.92■□□□□ 0.3
SREK1-212ENST00000522912 TASP1Q9H6P5 420 aa16.92■□□□□ 0.3
SREK1-212ENST00000522912 NLE1Q9NVX2 485 aaPredicted RBP16.92■□□□□ 0.3
SREK1-212ENST00000522912 CPSF2Q9P2I0 782 aaKnown RBP16.92■□□□□ 0.3
SREK1-212ENST00000522912 RWDD3Q9Y3V2 267 aa16.92■□□□□ 0.3
SREK1-212ENST00000522912 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.91■□□□□ 0.3
SREK1-212ENST00000522912 CLASP2O75122 1294 aaKnown RBP16.91■□□□□ 0.3
SREK1-212ENST00000522912 RALBP11234 206 aa16.91■□□□□ 0.3
SREK1-212ENST00000522912 SLC8A1P32418 973 aa16.91■□□□□ 0.3
SREK1-212ENST00000522912 SLC1A6P48664 564 aa16.91■□□□□ 0.3
SREK1-212ENST00000522912 CLCN5P51795 746 aa16.91■□□□□ 0.3
SREK1-212ENST00000522912 SEMA3AQ14563 771 aa16.91■□□□□ 0.3
SREK1-212ENST00000522912 SETDB1Q15047 1291 aa16.91■□□□□ 0.3
SREK1-212ENST00000522912 PTPRRQ15256 657 aa16.91■□□□□ 0.3
SREK1-212ENST00000522912 CRLF3Q8IUI8 442 aa16.91■□□□□ 0.3
SREK1-212ENST00000522912 NXNL1Q96CM4 212 aa16.91■□□□□ 0.3
SREK1-212ENST00000522912 CDKN2AIPNLQ96HQ2 116 aa16.91■□□□□ 0.3
SREK1-212ENST00000522912 C2orf49Q9BVC5 232 aaPredicted RBP16.91■□□□□ 0.3
SREK1-212ENST00000522912 INTS6Q9UL03 887 aaKnown RBP16.91■□□□□ 0.3
SREK1-212ENST00000522912 GBF1Q92538 1859 aa16.91■□□□□ 0.3
SREK1-212ENST00000522912 GRXCR1A8MXD5 290 aa16.91■□□□□ 0.3
SREK1-212ENST00000522912 ANKRD66B4E2M5 251 aa16.91■□□□□ 0.3
SREK1-212ENST00000522912 TK2O00142 265 aa16.91■□□□□ 0.3
SREK1-212ENST00000522912 CD3EAPO15446 510 aaKnown RBP16.91■□□□□ 0.3
SREK1-212ENST00000522912 DNAJC8O75937 253 aaPredicted RBP16.91■□□□□ 0.3
SREK1-212ENST00000522912 CRTAMO95727 393 aa16.91■□□□□ 0.3
SREK1-212ENST00000522912 KITP10721 976 aa16.91■□□□□ 0.3
SREK1-212ENST00000522912 MYL2P10916 166 aa16.91■□□□□ 0.3
SREK1-212ENST00000522912 GLRBP48167 497 aa16.91■□□□□ 0.3
SREK1-212ENST00000522912 NCALDP61601 193 aa16.91■□□□□ 0.3
SREK1-212ENST00000522912 NTHL1P78549 312 aa16.91■□□□□ 0.3
SREK1-212ENST00000522912 TAF1AQ15573 450 aaPredicted RBP16.91■□□□□ 0.3
SREK1-212ENST00000522912 RTL10Q7L3V2 364 aa16.91■□□□□ 0.3
SREK1-212ENST00000522912 GLT6D1Q7Z4J2 308 aa16.91■□□□□ 0.3
SREK1-212ENST00000522912 MTDHQ86UE4 582 aaKnown RBP16.91■□□□□ 0.3
SREK1-212ENST00000522912 LCA5Q86VQ0 697 aa16.91■□□□□ 0.3
SREK1-212ENST00000522912 LMNTD2Q8IXW0 634 aa16.91■□□□□ 0.3
SREK1-212ENST00000522912 SPATA6LQ8N4H0 392 aa16.91■□□□□ 0.3
SREK1-212ENST00000522912 GPR150Q8NGU9 434 aa16.91■□□□□ 0.3
SREK1-212ENST00000522912 PDCD6IPQ8WUM4 868 aaKnown RBP16.91■□□□□ 0.3
SREK1-212ENST00000522912 USP13Q92995 863 aaPredicted RBP16.91■□□□□ 0.3
SREK1-212ENST00000522912 LMLNQ96KR4 655 aa16.91■□□□□ 0.3
SREK1-212ENST00000522912 ECT2Q9H8V3 914 aa16.91■□□□□ 0.3
SREK1-212ENST00000522912 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.91■□□□□ 0.3
SREK1-212ENST00000522912 KIAA1522Q9P206 1035 aaPredicted RBP16.91■□□□□ 0.3
SREK1-212ENST00000522912 MARCOQ9UEW3 520 aaPredicted RBP16.91■□□□□ 0.3
SREK1-212ENST00000522912 GLP2RO95838 553 aa16.9■□□□□ 0.3
SREK1-212ENST00000522912 GRK2P25098 689 aa16.9■□□□□ 0.3
SREK1-212ENST00000522912 DDX6P26196 483 aaKnown RBP eCLIP16.9■□□□□ 0.3
SREK1-212ENST00000522912 HECTD2Q5U5R9 776 aa16.9■□□□□ 0.3
SREK1-212ENST00000522912 LRRC8EQ6NSJ5 796 aa16.9■□□□□ 0.3
SREK1-212ENST00000522912 NAPRTQ6XQN6 538 aa16.9■□□□□ 0.3
SREK1-212ENST00000522912 FSTL5Q8N475 847 aaPredicted RBP16.9■□□□□ 0.3
SREK1-212ENST00000522912 OR4K2Q8NGD2 314 aa16.9■□□□□ 0.3
SREK1-212ENST00000522912 OR4L1Q8NH43 312 aa16.9■□□□□ 0.3
SREK1-212ENST00000522912 TSNARE1Q96NA8 513 aa16.9■□□□□ 0.3
SREK1-212ENST00000522912 SORT1Q99523 831 aa16.9■□□□□ 0.3
SREK1-212ENST00000522912 ADGRE3Q9BY15 652 aa16.9■□□□□ 0.3
SREK1-212ENST00000522912 TM6SF2Q9BZW4 377 aa16.9■□□□□ 0.3
SREK1-212ENST00000522912 HEY2Q9UBP5 337 aa16.9■□□□□ 0.3
SREK1-212ENST00000522912 CHD9Q3L8U1 2897 aa16.9■□□□□ 0.3
SREK1-212ENST00000522912 A0A087X1B8 175 aa16.89■□□□□ 0.29
SREK1-212ENST00000522912 TARM1B6A8C7 271 aa16.89■□□□□ 0.29
SREK1-212ENST00000522912 KLHL2O95198 593 aa16.89■□□□□ 0.29
SREK1-212ENST00000522912 FGF19O95750 216 aa16.89■□□□□ 0.29
SREK1-212ENST00000522912 APOA4P06727 396 aa16.89■□□□□ 0.29
SREK1-212ENST00000522912 PRSS56P0CW18 603 aa16.89■□□□□ 0.29
SREK1-212ENST00000522912 PSMA3P25788 255 aa16.89■□□□□ 0.29
SREK1-212ENST00000522912 ABL2P42684 1182 aa16.89■□□□□ 0.29
SREK1-212ENST00000522912 SLC12A2P55011 1212 aa16.89■□□□□ 0.29
SREK1-212ENST00000522912 PLEKHG6Q3KR16 790 aa16.89■□□□□ 0.29
SREK1-212ENST00000522912 ZNF697Q5TEC3 545 aa16.89■□□□□ 0.29
SREK1-212ENST00000522912 FAM109BQ6ICB4 259 aaPredicted RBP16.89■□□□□ 0.29
SREK1-212ENST00000522912 RETSATQ6NUM9 610 aa16.89■□□□□ 0.29
SREK1-212ENST00000522912 ZYG11AQ6WRX3 759 aa16.89■□□□□ 0.29
SREK1-212ENST00000522912 ACDQ96AP0 544 aa16.89■□□□□ 0.29
SREK1-212ENST00000522912 SCYL1Q96KG9 808 aa16.89■□□□□ 0.29
SREK1-212ENST00000522912 UNKQ9C0B0 810 aaKnown RBP16.89■□□□□ 0.29
SREK1-212ENST00000522912 KCNK4Q9NYG8 393 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms