RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 USP28Q96RU2 1077 aa11.1□□□□□ -0.63
CTNNA1-234ENST00000522227 CEP44Q9C0F1 390 aa11.1□□□□□ -0.63
CTNNA1-234ENST00000522227 ACSS2Q9NR19 701 aa11.1□□□□□ -0.63
CTNNA1-234ENST00000522227 EXOC1Q9NV70 894 aa11.1□□□□□ -0.63
CTNNA1-234ENST00000522227 DIDO1Q9BTC0 2240 aaKnown RBP11.09□□□□□ -0.63
CTNNA1-234ENST00000522227 CSMD2Q7Z408 3487 aa11.09□□□□□ -0.63
CTNNA1-234ENST00000522227 PRRC2CQ9Y520 2896 aaKnown RBP11.09□□□□□ -0.63
CTNNA1-234ENST00000522227 RNF225M0QZC1 329 aaPredicted RBP11.09□□□□□ -0.63
CTNNA1-234ENST00000522227 CACNB4O00305 520 aaPredicted RBP11.09□□□□□ -0.63
CTNNA1-234ENST00000522227 POLR2DO15514 142 aaKnown RBP11.09□□□□□ -0.63
CTNNA1-234ENST00000522227 LRRTM2O43300 516 aa11.09□□□□□ -0.63
CTNNA1-234ENST00000522227 ZG16O60844 167 aa11.09□□□□□ -0.63
CTNNA1-234ENST00000522227 PPP6R2O75170 966 aa11.09□□□□□ -0.63
CTNNA1-234ENST00000522227 CREG1O75629 220 aa11.09□□□□□ -0.63
CTNNA1-234ENST00000522227 ZMPSTE24O75844 475 aa11.09□□□□□ -0.63
CTNNA1-234ENST00000522227 BMP6P22004 513 aa11.09□□□□□ -0.63
CTNNA1-234ENST00000522227 GPR3P46089 330 aa11.09□□□□□ -0.63
CTNNA1-234ENST00000522227 NASPP49321 788 aaPredicted RBP11.09□□□□□ -0.63
CTNNA1-234ENST00000522227 RNASE9P60153 205 aaKnown RBP11.09□□□□□ -0.63
CTNNA1-234ENST00000522227 YWHAZP63104 245 aaKnown RBP11.09□□□□□ -0.63
CTNNA1-234ENST00000522227 ARF5P84085 180 aa11.09□□□□□ -0.63
CTNNA1-234ENST00000522227 FOXM1Q08050 763 aa11.09□□□□□ -0.63
CTNNA1-234ENST00000522227 SLC39A14Q15043 492 aa11.09□□□□□ -0.63
CTNNA1-234ENST00000522227 CLPPQ16740 277 aaPredicted RBP11.09□□□□□ -0.63
CTNNA1-234ENST00000522227 GDPD4Q6W3E5 623 aa11.09□□□□□ -0.63
CTNNA1-234ENST00000522227 GDF7Q7Z4P5 450 aa11.09□□□□□ -0.63
CTNNA1-234ENST00000522227 NRROSQ86YC3 692 aa11.09□□□□□ -0.63
CTNNA1-234ENST00000522227 APLFQ8IW19 511 aaPredicted RBP11.09□□□□□ -0.63
CTNNA1-234ENST00000522227 DEFB106AQ8N104 65 aa11.09□□□□□ -0.63
CTNNA1-234ENST00000522227 STAMBPL1Q96FJ0 436 aa11.09□□□□□ -0.63
CTNNA1-234ENST00000522227 ZPBPQ9BS86 351 aa11.09□□□□□ -0.63
CTNNA1-234ENST00000522227 CARS2Q9HA77 564 aaKnown RBP11.09□□□□□ -0.63
CTNNA1-234ENST00000522227 TAAR2Q9P1P5 351 aa11.09□□□□□ -0.63
CTNNA1-234ENST00000522227 KIAA1257Q9ULG3 409 aa11.09□□□□□ -0.63
CTNNA1-234ENST00000522227 MAPK8IP1Q9UQF2 711 aa11.09□□□□□ -0.63
CTNNA1-234ENST00000522227 ZSCAN5CA6NGD5 496 aaPredicted RBP11.08□□□□□ -0.64
CTNNA1-234ENST00000522227 A6NL46 340 aa11.08□□□□□ -0.64
CTNNA1-234ENST00000522227 E5RJQ4 531 aa11.08□□□□□ -0.64
CTNNA1-234ENST00000522227 F5H423 210 aaPredicted RBP11.08□□□□□ -0.64
CTNNA1-234ENST00000522227 TEX33O43247 280 aa11.08□□□□□ -0.64
CTNNA1-234ENST00000522227 DPM1O60762 260 aa11.08□□□□□ -0.64
CTNNA1-234ENST00000522227 CCNB1P14635 433 aa11.08□□□□□ -0.64
CTNNA1-234ENST00000522227 GTF2H1P32780 548 aa11.08□□□□□ -0.64
CTNNA1-234ENST00000522227 PSMC2P35998 433 aaKnown RBP11.08□□□□□ -0.64
CTNNA1-234ENST00000522227 MAPK9P45984 424 aa11.08□□□□□ -0.64
CTNNA1-234ENST00000522227 RPS18P62269 152 aaKnown RBP11.08□□□□□ -0.64
CTNNA1-234ENST00000522227 MTM1Q13496 603 aa11.08□□□□□ -0.64
CTNNA1-234ENST00000522227 EIF4EBP2Q13542 120 aaPredicted RBP11.08□□□□□ -0.64
CTNNA1-234ENST00000522227 NR1D2Q14995 579 aa11.08□□□□□ -0.64
CTNNA1-234ENST00000522227 STK38Q15208 465 aa11.08□□□□□ -0.64
CTNNA1-234ENST00000522227 MYLK3Q32MK0 819 aa11.08□□□□□ -0.64
CTNNA1-234ENST00000522227 TCERG1LQ5VWI1 586 aa11.08□□□□□ -0.64
CTNNA1-234ENST00000522227 DENND1BQ6P3S1 775 aa11.08□□□□□ -0.64
CTNNA1-234ENST00000522227 SETD3Q86TU7 594 aaPredicted RBP11.08□□□□□ -0.64
CTNNA1-234ENST00000522227 DRC7Q8IY82 874 aa11.08□□□□□ -0.64
CTNNA1-234ENST00000522227 RBMXL3Q8N7X1 1067 aaKnown RBP11.08□□□□□ -0.64
CTNNA1-234ENST00000522227 NCSTNQ92542 709 aa11.08□□□□□ -0.64
CTNNA1-234ENST00000522227 FAXDC2Q96IV6 333 aa11.08□□□□□ -0.64
CTNNA1-234ENST00000522227 RUFY1Q96T51 708 aa11.08□□□□□ -0.64
CTNNA1-234ENST00000522227 TRIM62Q9BVG3 475 aa11.08□□□□□ -0.64
CTNNA1-234ENST00000522227 LGR4Q9BXB1 951 aa11.08□□□□□ -0.64
CTNNA1-234ENST00000522227 FBXO8Q9NRD0 319 aa11.08□□□□□ -0.64
CTNNA1-234ENST00000522227 ZNF451Q9Y4E5 1061 aa11.08□□□□□ -0.64
CTNNA1-234ENST00000522227 AKAP9Q99996 3911 aa11.08□□□□□ -0.64
CTNNA1-234ENST00000522227 PRSS38A1L453 326 aa11.07□□□□□ -0.64
CTNNA1-234ENST00000522227 MAPK13O15264 365 aa11.07□□□□□ -0.64
CTNNA1-234ENST00000522227 KLRC4O43908 158 aa11.07□□□□□ -0.64
CTNNA1-234ENST00000522227 SRGAP2O75044 1071 aa11.07□□□□□ -0.64
CTNNA1-234ENST00000522227 KIAA0754O94854 1291 aa11.07□□□□□ -0.64
CTNNA1-234ENST00000522227 POP4O95707 220 aaKnown RBP11.07□□□□□ -0.64
CTNNA1-234ENST00000522227 CD160O95971 181 aa11.07□□□□□ -0.64
CTNNA1-234ENST00000522227 PAEPP09466 180 aa11.07□□□□□ -0.64
CTNNA1-234ENST00000522227 NFKBIAP25963 317 aa11.07□□□□□ -0.64
CTNNA1-234ENST00000522227 VARSP26640 1264 aaKnown RBP11.07□□□□□ -0.64
CTNNA1-234ENST00000522227 CLCN1P35523 988 aa11.07□□□□□ -0.64
CTNNA1-234ENST00000522227 ACVRL1P37023 503 aa11.07□□□□□ -0.64
CTNNA1-234ENST00000522227 ACADSBP45954 432 aa11.07□□□□□ -0.64
CTNNA1-234ENST00000522227 GNPDA1P46926 289 aa11.07□□□□□ -0.64
CTNNA1-234ENST00000522227 ITGA1P56199 1179 aa11.07□□□□□ -0.64
CTNNA1-234ENST00000522227 SLC20A2Q08357 652 aa11.07□□□□□ -0.64
CTNNA1-234ENST00000522227 ILF3Q12906 894 aaKnown RBP eCLIP11.07□□□□□ -0.64
CTNNA1-234ENST00000522227 DNASE1L3Q13609 305 aa11.07□□□□□ -0.64
CTNNA1-234ENST00000522227 RAPSNQ13702 412 aa11.07□□□□□ -0.64
CTNNA1-234ENST00000522227 POLD3Q15054 466 aaPredicted RBP11.07□□□□□ -0.64
CTNNA1-234ENST00000522227 ZRSR2Q15696 482 aaKnown RBP11.07□□□□□ -0.64
CTNNA1-234ENST00000522227 CHRNA6Q15825 494 aa11.07□□□□□ -0.64
CTNNA1-234ENST00000522227 TMEM52BQ4KMG9 183 aa11.07□□□□□ -0.64
CTNNA1-234ENST00000522227 CBWD6Q4V339 395 aa11.07□□□□□ -0.64
CTNNA1-234ENST00000522227 DCAF17Q5H9S7 520 aaPredicted RBP11.07□□□□□ -0.64
CTNNA1-234ENST00000522227 CBWD3Q5JTY5 395 aa11.07□□□□□ -0.64
CTNNA1-234ENST00000522227 CBWD5Q5RIA9 395 aa11.07□□□□□ -0.64
CTNNA1-234ENST00000522227 C17orf82Q86X59 251 aaPredicted RBP11.07□□□□□ -0.64
CTNNA1-234ENST00000522227 NAGSQ8N159 534 aa11.07□□□□□ -0.64
CTNNA1-234ENST00000522227 UBR7Q8N806 425 aa11.07□□□□□ -0.64
CTNNA1-234ENST00000522227 OR2AP1Q8NGE2 309 aa11.07□□□□□ -0.64
CTNNA1-234ENST00000522227 ING2Q9H160 280 aa11.07□□□□□ -0.64
CTNNA1-234ENST00000522227 THAP9Q9H5L6 903 aa11.07□□□□□ -0.64
CTNNA1-234ENST00000522227 ANLNQ9NQW6 1124 aa11.07□□□□□ -0.64
CTNNA1-234ENST00000522227 PCDHGA9Q9Y5G4 932 aaKnown RBP11.07□□□□□ -0.64
CTNNA1-234ENST00000522227 SPG11Q96JI7 2443 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms