RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 PPCSQ9HAB8 311 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 SLC38A10Q9HBR0 1119 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 CD93Q9NPY3 652 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 KIF17Q9P2E2 1029 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 MBD2Q9UBB5 411 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 PI4KBQ9UBF8 816 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 EXOC7Q9UPT5 735 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 SNX9Q9Y5X1 595 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 PXDNQ92626 1479 aa4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 CDK12Q9NYV4 1490 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P13-201ENST00000511263 KIAA0232Q92628 1395 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 CCDC169A6NNP5 214 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 PRRT4C9JH25 899 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 AKR1B15C9JRZ8 316 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 ZNF213O14771 459 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 CETN3O15182 167 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 KCNQ3O43525 872 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 STRNO43815 780 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 DAB1O75553 588 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 FGF18O76093 207 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 BAIAP3O94812 1187 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 VNN1O95497 513 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 ANP32DO95626 131 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 PAHP00439 452 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 SERPINC1P01008 464 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 VIPP01282 170 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 SLC3A2P08195 630 aaKnown RBP4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 HMOX1P09601 288 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 PDHBP11177 359 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 RXRAP19793 462 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 PSMA4P25789 261 aaKnown RBP4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 HSD17B2P37059 387 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 STAT6P42226 847 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 TM4SF4P48230 202 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 RENBPP51606 427 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 ALDH5A1P51649 535 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 CFHR3Q02985 330 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 TEFQ10587 303 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 SQLEQ14534 574 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 TMEM119Q4V9L6 283 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 ZCWPW2Q504Y3 356 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 FAM209BQ5JX69 171 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 IZUMO3Q5VZ72 239 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 ANO7Q6IWH7 933 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 TTC23LQ6PF05 361 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 BTN2A1Q7KYR7 527 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 SPATA24Q86W54 205 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 AADATQ8N5Z0 425 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 OR2C3Q8N628 320 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 C12orf76Q8N812 135 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 PEX13Q92968 403 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 FAM149B1Q96BN6 582 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 LTV1Q96GA3 475 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 MMS19Q96T76 1030 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 FAM118BQ9BPY3 351 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 CENPKQ9BS16 269 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 FUCA2Q9BTY2 467 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 NUP58Q9BVL2 599 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 SELENOOQ9BVL4 669 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 TIPINQ9BVW5 301 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 CARD6Q9BX69 1037 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 OSBPL5Q9H0X9 879 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 DNAJC18Q9H819 358 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 XAB2Q9HCS7 855 aaKnown RBP4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 NLRC4Q9NPP4 1024 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 GAR1Q9NY12 217 aaKnown RBP4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 PGAP2Q9UHJ9 254 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 RIMKLBQ9ULI2 386 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 CFL2Q9Y281 166 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 ZBTB1Q9Y2K1 713 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 SLC27A6Q9Y2P4 619 aa4.78□□□□□ -1.64
HMGB3P13-201ENST00000511263 FMN2Q9NZ56 1722 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 ARHGEF17Q96PE2 2063 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 ABCC6O95255 1503 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 SPATA31A1Q5TZJ5 1347 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 SPATA31A5Q5VU36 1347 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 SPATA31A7Q8IWB4 1347 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 KIF1AQ12756 1690 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 CCDC69A6NI79 296 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 HIP1O00291 1037 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 RNMTO43148 476 aaKnown RBP4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 TSC22D2O75157 780 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 WDR47O94967 919 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 PDE8BO95263 885 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 OLFM2O95897 454 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 ECDO95905 644 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 GSTT2P0CG29 244 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 GSTT2BP0CG30 244 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 CALM1P0DP23 149 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 CALM2P0DP24 149 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 CALM3P0DP25 149 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 KRT10P13645 584 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 ALADP13716 330 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 ACADSP16219 412 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 CTRB1P17538 263 aa4.77□□□□□ -1.65
HMGB3P13-201ENST00000511263 IL10P22301 178 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms