RNA–Protein interactions for RNA: ENST00000507471.1

TSPAN17-206, Transcript of tetraspanin 17, humanhuman

TSL 3

Gene TSPAN17, Length 707 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-206ENST00000507471 FGF22Q9HCT0 170 aa13.93□□□□□ -0.18
TSPAN17-206ENST00000507471 MRPL40Q9NQ50 206 aaKnown RBP13.93□□□□□ -0.18
TSPAN17-206ENST00000507471 LRIT1Q9P2V4 623 aa13.93□□□□□ -0.18
TSPAN17-206ENST00000507471 A0A1W2PQC6 194 aa13.92□□□□□ -0.18
TSPAN17-206ENST00000507471 WASH4PA8MWX3 477 aa13.92□□□□□ -0.18
TSPAN17-206ENST00000507471 B4DGG1 531 aa13.92□□□□□ -0.18
TSPAN17-206ENST00000507471 BUB1BO60566 1050 aaPredicted RBP13.92□□□□□ -0.18
TSPAN17-206ENST00000507471 GFPT2O94808 682 aa13.92□□□□□ -0.18
TSPAN17-206ENST00000507471 KRT3P12035 628 aa13.92□□□□□ -0.18
TSPAN17-206ENST00000507471 CHRNB2P17787 502 aa13.92□□□□□ -0.18
TSPAN17-206ENST00000507471 RFC1P35251 1148 aaPredicted RBP13.92□□□□□ -0.18
TSPAN17-206ENST00000507471 GSCP56915 257 aaPredicted RBP13.92□□□□□ -0.18
TSPAN17-206ENST00000507471 KIAA1024LP59773 190 aa13.92□□□□□ -0.18
TSPAN17-206ENST00000507471 GRM3Q14832 879 aa13.92□□□□□ -0.18
TSPAN17-206ENST00000507471 PARP15Q460N3 678 aa13.92□□□□□ -0.18
TSPAN17-206ENST00000507471 PHF19Q5T6S3 580 aa13.92□□□□□ -0.18
TSPAN17-206ENST00000507471 BRAT1Q6PJG6 821 aa13.92□□□□□ -0.18
TSPAN17-206ENST00000507471 UMODL1-AS1Q8N2C9 162 aa13.92□□□□□ -0.18
TSPAN17-206ENST00000507471 ZSCAN1Q8NBB4 408 aa13.92□□□□□ -0.18
TSPAN17-206ENST00000507471 CCL4L1Q8NHW4 92 aa13.92□□□□□ -0.18
TSPAN17-206ENST00000507471 FUBP1Q96AE4 644 aaKnown RBP13.92□□□□□ -0.18
TSPAN17-206ENST00000507471 ZNF641Q96N77 438 aaPredicted RBP13.92□□□□□ -0.18
TSPAN17-206ENST00000507471 TMEM168Q9H0V1 697 aa13.92□□□□□ -0.18
TSPAN17-206ENST00000507471 GANQ9H2C0 597 aa13.92□□□□□ -0.18
TSPAN17-206ENST00000507471 SEMA6CQ9H3T2 930 aa13.92□□□□□ -0.18
TSPAN17-206ENST00000507471 DPEP2Q9H4A9 486 aa13.92□□□□□ -0.18
TSPAN17-206ENST00000507471 PDFQ9HBH1 243 aa13.92□□□□□ -0.18
TSPAN17-206ENST00000507471 UBA2Q9UBT2 640 aaPredicted RBP13.92□□□□□ -0.18
TSPAN17-206ENST00000507471 ATP8A1Q9Y2Q0 1164 aa13.92□□□□□ -0.18
TSPAN17-206ENST00000507471 PCDHB11Q9Y5F2 797 aa13.92□□□□□ -0.18
TSPAN17-206ENST00000507471 CACNB4O00305 520 aaPredicted RBP13.91□□□□□ -0.18
TSPAN17-206ENST00000507471 NUDT21O43809 227 aaKnown RBP13.91□□□□□ -0.18
TSPAN17-206ENST00000507471 CREB3O43889 395 aa13.91□□□□□ -0.18
TSPAN17-206ENST00000507471 RECQL5O94762 991 aaPredicted RBP13.91□□□□□ -0.18
TSPAN17-206ENST00000507471 UNGP13051 313 aaPredicted RBP13.91□□□□□ -0.18
TSPAN17-206ENST00000507471 GPD1P21695 349 aa13.91□□□□□ -0.18
TSPAN17-206ENST00000507471 RALGDSQ12967 914 aa13.91□□□□□ -0.18
TSPAN17-206ENST00000507471 ARHGEF7Q14155 803 aa13.91□□□□□ -0.18
TSPAN17-206ENST00000507471 BECN1Q14457 450 aa13.91□□□□□ -0.18
TSPAN17-206ENST00000507471 CLCA4Q14CN2 919 aa13.91□□□□□ -0.18
TSPAN17-206ENST00000507471 C16orf72Q14CZ0 275 aa13.91□□□□□ -0.18
TSPAN17-206ENST00000507471 MAP9Q49MG5 647 aa13.91□□□□□ -0.18
TSPAN17-206ENST00000507471 EFHC2Q5JST6 749 aa13.91□□□□□ -0.18
TSPAN17-206ENST00000507471 CFAP58Q5T655 872 aa13.91□□□□□ -0.18
TSPAN17-206ENST00000507471 SPECC1LQ69YQ0 1117 aa13.91□□□□□ -0.18
TSPAN17-206ENST00000507471 WDR59Q6PJI9 974 aa13.91□□□□□ -0.18
TSPAN17-206ENST00000507471 CAMK1DQ8IU85 385 aa13.91□□□□□ -0.18
TSPAN17-206ENST00000507471 TUBGCP5Q96RT8 1024 aa13.91□□□□□ -0.18
TSPAN17-206ENST00000507471 FUCA2Q9BTY2 467 aa13.91□□□□□ -0.18
TSPAN17-206ENST00000507471 SELENOOQ9BVL4 669 aa13.91□□□□□ -0.18
TSPAN17-206ENST00000507471 CATSPERBQ9H7T0 1116 aa13.91□□□□□ -0.18
TSPAN17-206ENST00000507471 RDH14Q9HBH5 336 aa13.91□□□□□ -0.18
TSPAN17-206ENST00000507471 FZD10Q9ULW2 581 aa13.91□□□□□ -0.18
TSPAN17-206ENST00000507471 CFAP69A5D8W1 941 aa13.9□□□□□ -0.18
TSPAN17-206ENST00000507471 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.9□□□□□ -0.18
TSPAN17-206ENST00000507471 J3KR12 359 aa13.9□□□□□ -0.18
TSPAN17-206ENST00000507471 TNFRSF10CO14798 259 aa13.9□□□□□ -0.18
TSPAN17-206ENST00000507471 CCP110O43303 1012 aa13.9□□□□□ -0.18
TSPAN17-206ENST00000507471 PPFIA2O75334 1257 aa13.9□□□□□ -0.18
TSPAN17-206ENST00000507471 GM2AP17900 193 aa13.9□□□□□ -0.18
TSPAN17-206ENST00000507471 CD82P27701 267 aa13.9□□□□□ -0.18
TSPAN17-206ENST00000507471 TRIM23P36406 574 aa13.9□□□□□ -0.18
TSPAN17-206ENST00000507471 RGRP47804 291 aa13.9□□□□□ -0.18
TSPAN17-206ENST00000507471 B4GALNT1Q00973 533 aa13.9□□□□□ -0.18
TSPAN17-206ENST00000507471 SRSF1Q07955 248 aaKnown RBP eCLIP13.9□□□□□ -0.18
TSPAN17-206ENST00000507471 DPCR1Q3MIW9 517 aa13.9□□□□□ -0.18
TSPAN17-206ENST00000507471 COLEC12Q5KU26 742 aa13.9□□□□□ -0.18
TSPAN17-206ENST00000507471 SCYL2Q6P3W7 929 aa13.9□□□□□ -0.18
TSPAN17-206ENST00000507471 LIPIQ6XZB0 460 aa13.9□□□□□ -0.18
TSPAN17-206ENST00000507471 PIM3Q86V86 326 aa13.9□□□□□ -0.18
TSPAN17-206ENST00000507471 PCDHB18PQ96TA0 734 aa13.9□□□□□ -0.18
TSPAN17-206ENST00000507471 LGR4Q9BXB1 951 aa13.9□□□□□ -0.18
TSPAN17-206ENST00000507471 B3GNT4Q9C0J1 378 aa13.9□□□□□ -0.18
TSPAN17-206ENST00000507471 SLC25A18Q9H1K4 315 aa13.9□□□□□ -0.18
TSPAN17-206ENST00000507471 LRRC19Q9H756 370 aa13.9□□□□□ -0.18
TSPAN17-206ENST00000507471 CYP4F12Q9HCS2 524 aa13.9□□□□□ -0.18
TSPAN17-206ENST00000507471 SAMSN1Q9NSI8 373 aaKnown RBP13.9□□□□□ -0.18
TSPAN17-206ENST00000507471 BSNQ9UPA5 3926 aa13.89□□□□□ -0.19
TSPAN17-206ENST00000507471 PRSS38A1L453 326 aa13.89□□□□□ -0.19
TSPAN17-206ENST00000507471 B4GAT1O43505 415 aa13.89□□□□□ -0.19
TSPAN17-206ENST00000507471 PRAMEF11O60813 436 aa13.89□□□□□ -0.19
TSPAN17-206ENST00000507471 CPNE6O95741 557 aa13.89□□□□□ -0.19
TSPAN17-206ENST00000507471 HOXC4P09017 264 aaPredicted RBP13.89□□□□□ -0.19
TSPAN17-206ENST00000507471 ELFN1P0C7U0 828 aa13.89□□□□□ -0.19
TSPAN17-206ENST00000507471 CCL4P13236 92 aa13.89□□□□□ -0.19
TSPAN17-206ENST00000507471 KELP23276 732 aa13.89□□□□□ -0.19
TSPAN17-206ENST00000507471 ERCC5P28715 1186 aaPredicted RBP13.89□□□□□ -0.19
TSPAN17-206ENST00000507471 NSFP46459 744 aaKnown RBP13.89□□□□□ -0.19
TSPAN17-206ENST00000507471 KLK7P49862 253 aa13.89□□□□□ -0.19
TSPAN17-206ENST00000507471 MAZP56270 477 aaKnown RBP13.89□□□□□ -0.19
TSPAN17-206ENST00000507471 POLR2FP61218 127 aaKnown RBP13.89□□□□□ -0.19
TSPAN17-206ENST00000507471 TMEM164Q5U3C3 297 aa13.89□□□□□ -0.19
TSPAN17-206ENST00000507471 TRIM72Q6ZMU5 477 aa13.89□□□□□ -0.19
TSPAN17-206ENST00000507471 PELI3Q8N2H9 469 aa13.89□□□□□ -0.19
TSPAN17-206ENST00000507471 TSEN2Q8NCE0 465 aaKnown RBP13.89□□□□□ -0.19
TSPAN17-206ENST00000507471 C3orf20Q8ND61 904 aa13.89□□□□□ -0.19
TSPAN17-206ENST00000507471 RCBTB1Q8NDN9 531 aa13.89□□□□□ -0.19
TSPAN17-206ENST00000507471 KIAA1524Q8TCG1 905 aa13.89□□□□□ -0.19
TSPAN17-206ENST00000507471 JPH3Q8WXH2 748 aaPredicted RBP13.89□□□□□ -0.19
TSPAN17-206ENST00000507471 ECHDC3Q96DC8 303 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms