RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 SLC15A3Q8IY34 581 aa17.84■□□□□ 0.45
NUP54-205ENST00000507257 INTS10Q9NVR2 710 aaKnown RBP17.84■□□□□ 0.45
NUP54-205ENST00000507257 SCAF8Q9UPN6 1271 aaKnown RBP17.84■□□□□ 0.45
NUP54-205ENST00000507257 AURKCQ9UQB9 309 aa17.84■□□□□ 0.45
NUP54-205ENST00000507257 AAR2Q9Y312 384 aaKnown RBP17.84■□□□□ 0.45
NUP54-205ENST00000507257 CCDC78A2IDD5 438 aa17.83■□□□□ 0.44
NUP54-205ENST00000507257 TMEM247A6NEH6 219 aa17.83■□□□□ 0.44
NUP54-205ENST00000507257 M0QYT0 321 aa17.83■□□□□ 0.44
NUP54-205ENST00000507257 TSPAN1O60635 241 aa17.83■□□□□ 0.44
NUP54-205ENST00000507257 E2F6O75461 281 aa17.83■□□□□ 0.44
NUP54-205ENST00000507257 MATN4O95460 622 aa17.83■□□□□ 0.44
NUP54-205ENST00000507257 MBL2P11226 248 aaPredicted RBP17.83■□□□□ 0.44
NUP54-205ENST00000507257 TPH1P17752 444 aa17.83■□□□□ 0.44
NUP54-205ENST00000507257 RFC2P35250 354 aa17.83■□□□□ 0.44
NUP54-205ENST00000507257 TPI1P60174 286 aa17.83■□□□□ 0.44
NUP54-205ENST00000507257 BCL2A1Q16548 175 aa17.83■□□□□ 0.44
NUP54-205ENST00000507257 NBPF12Q5TAG4 269 aaPredicted RBP17.83■□□□□ 0.44
NUP54-205ENST00000507257 OGFOD2Q6N063 350 aa17.83■□□□□ 0.44
NUP54-205ENST00000507257 CYHR1Q6ZMK1 362 aa17.83■□□□□ 0.44
NUP54-205ENST00000507257 RETREG3Q86VR2 466 aa17.83■□□□□ 0.44
NUP54-205ENST00000507257 PTRH1Q86Y79 214 aaKnown RBP17.83■□□□□ 0.44
NUP54-205ENST00000507257 TSPEARQ8WU66 669 aa17.83■□□□□ 0.44
NUP54-205ENST00000507257 KCTD13Q8WZ19 329 aa17.83■□□□□ 0.44
NUP54-205ENST00000507257 UNKQ9C0B0 810 aaKnown RBP17.83■□□□□ 0.44
NUP54-205ENST00000507257 TMPRSS4Q9NRS4 437 aa17.83■□□□□ 0.44
NUP54-205ENST00000507257 MAP10Q9P2G4 905 aa17.83■□□□□ 0.44
NUP54-205ENST00000507257 OAZ3Q9UMX2 235 aa17.83■□□□□ 0.44
NUP54-205ENST00000507257 WDR90Q96KV7 1748 aa17.83■□□□□ 0.44
NUP54-205ENST00000507257 CLPXO76031 633 aa17.82■□□□□ 0.44
NUP54-205ENST00000507257 GFAPP14136 432 aa17.82■□□□□ 0.44
NUP54-205ENST00000507257 ARNTP27540 789 aa17.82■□□□□ 0.44
NUP54-205ENST00000507257 RPS9P46781 194 aaKnown RBP17.82■□□□□ 0.44
NUP54-205ENST00000507257 GJA9P57773 515 aa17.82■□□□□ 0.44
NUP54-205ENST00000507257 ZNF460Q14592 562 aa17.82■□□□□ 0.44
NUP54-205ENST00000507257 NR1D2Q14995 579 aa17.82■□□□□ 0.44
NUP54-205ENST00000507257 CCDC92Q53HC0 331 aaPredicted RBP17.82■□□□□ 0.44
NUP54-205ENST00000507257 KIAA0930Q6ICG6 404 aaPredicted RBP17.82■□□□□ 0.44
NUP54-205ENST00000507257 FRA10AC1Q70Z53 315 aa17.82■□□□□ 0.44
NUP54-205ENST00000507257 KRT27Q7Z3Y8 459 aa17.82■□□□□ 0.44
NUP54-205ENST00000507257 PIGZQ86VD9 579 aa17.82■□□□□ 0.44
NUP54-205ENST00000507257 DENND6AQ8IWF6 608 aa17.82■□□□□ 0.44
NUP54-205ENST00000507257 TBC1D21Q8IYX1 336 aa17.82■□□□□ 0.44
NUP54-205ENST00000507257 MINDY2Q8NBR6 621 aa17.82■□□□□ 0.44
NUP54-205ENST00000507257 BEST2Q8NFU1 509 aa17.82■□□□□ 0.44
NUP54-205ENST00000507257 CYGBQ8WWM9 190 aa17.82■□□□□ 0.44
NUP54-205ENST00000507257 HDAC10Q969S8 669 aa17.82■□□□□ 0.44
NUP54-205ENST00000507257 FAM149B1Q96BN6 582 aa17.82■□□□□ 0.44
NUP54-205ENST00000507257 L3HYPDHQ96EM0 354 aa17.82■□□□□ 0.44
NUP54-205ENST00000507257 MAGED4Q96JG8 741 aa17.82■□□□□ 0.44
NUP54-205ENST00000507257 PPP1R2P1Q96PQ5 205 aa17.82■□□□□ 0.44
NUP54-205ENST00000507257 PPP1R10Q96QC0 940 aaKnown RBP17.82■□□□□ 0.44
NUP54-205ENST00000507257 APOL2Q9BQE5 337 aa17.82■□□□□ 0.44
NUP54-205ENST00000507257 TNFRSF12AQ9NP84 129 aa17.82■□□□□ 0.44
NUP54-205ENST00000507257 PIGVQ9NUD9 493 aa17.82■□□□□ 0.44
NUP54-205ENST00000507257 GMIPQ9P107 970 aa17.82■□□□□ 0.44
NUP54-205ENST00000507257 ZNF236Q9UL36 1845 aa17.82■□□□□ 0.44
NUP54-205ENST00000507257 HTR3EA5X5Y0 456 aa17.82■□□□□ 0.44
NUP54-205ENST00000507257 KPNA4O00629 521 aaPredicted RBP17.82■□□□□ 0.44
NUP54-205ENST00000507257 PPEF2O14830 753 aa17.82■□□□□ 0.44
NUP54-205ENST00000507257 FOXD2O60548 495 aaPredicted RBP17.82■□□□□ 0.44
NUP54-205ENST00000507257 BCL10O95999 233 aa17.82■□□□□ 0.44
NUP54-205ENST00000507257 PAMP19021 973 aa17.82■□□□□ 0.44
NUP54-205ENST00000507257 MAP4P27816 1152 aaKnown RBP17.82■□□□□ 0.44
NUP54-205ENST00000507257 HOXD12P35452 270 aa17.82■□□□□ 0.44
NUP54-205ENST00000507257 SLC12A2P55011 1212 aa17.82■□□□□ 0.44
NUP54-205ENST00000507257 PITX1P78337 314 aaPredicted RBP17.82■□□□□ 0.44
NUP54-205ENST00000507257 TNK2Q07912 1038 aa17.82■□□□□ 0.44
NUP54-205ENST00000507257 ADIGQ0VDE8 80 aa17.82■□□□□ 0.44
NUP54-205ENST00000507257 BTBD8Q5XKL5 378 aa17.82■□□□□ 0.44
NUP54-205ENST00000507257 LAYNQ6UX15 382 aa17.82■□□□□ 0.44
NUP54-205ENST00000507257 LIMS2Q7Z4I7 341 aa17.82■□□□□ 0.44
NUP54-205ENST00000507257 CPNE9Q8IYJ1 553 aa17.82■□□□□ 0.44
NUP54-205ENST00000507257 NPWQ8N729 165 aa17.82■□□□□ 0.44
NUP54-205ENST00000507257 PPHLN1Q8NEY8 458 aaKnown RBP17.82■□□□□ 0.44
NUP54-205ENST00000507257 OR9I1Q8NGQ6 314 aa17.82■□□□□ 0.44
NUP54-205ENST00000507257 FAM110BQ8TC76 370 aa17.82■□□□□ 0.44
NUP54-205ENST00000507257 NRBF2Q96F24 287 aa17.82■□□□□ 0.44
NUP54-205ENST00000507257 FBXL20Q96IG2 436 aa17.82■□□□□ 0.44
NUP54-205ENST00000507257 SPATA33Q96N06 139 aa17.82■□□□□ 0.44
NUP54-205ENST00000507257 ASB2Q96Q27 587 aa17.82■□□□□ 0.44
NUP54-205ENST00000507257 GSTO2Q9H4Y5 243 aa17.82■□□□□ 0.44
NUP54-205ENST00000507257 SFMBT1Q9UHJ3 866 aa17.82■□□□□ 0.44
NUP54-205ENST00000507257 PSME2Q9UL46 239 aa17.82■□□□□ 0.44
NUP54-205ENST00000507257 A0A0J9YYE9 177 aa17.81■□□□□ 0.44
NUP54-205ENST00000507257 FAM72CH0Y354 149 aa17.81■□□□□ 0.44
NUP54-205ENST00000507257 FXYD1O00168 92 aa17.81■□□□□ 0.44
NUP54-205ENST00000507257 EI24O14681 340 aa17.81■□□□□ 0.44
NUP54-205ENST00000507257 SEC24DO94855 1032 aaPredicted RBP17.81■□□□□ 0.44
NUP54-205ENST00000507257 CPB1P15086 417 aa17.81■□□□□ 0.44
NUP54-205ENST00000507257 IMPDH1P20839 514 aa17.81■□□□□ 0.44
NUP54-205ENST00000507257 SLC1A2P43004 574 aa17.81■□□□□ 0.44
NUP54-205ENST00000507257 PGGT1BP53609 377 aa17.81■□□□□ 0.44
NUP54-205ENST00000507257 NFKB2Q00653 900 aa17.81■□□□□ 0.44
NUP54-205ENST00000507257 CTBP1Q13363 440 aa17.81■□□□□ 0.44
NUP54-205ENST00000507257 ACAP2Q15057 778 aa17.81■□□□□ 0.44
NUP54-205ENST00000507257 FAM72AQ5TYM5 149 aa17.81■□□□□ 0.44
NUP54-205ENST00000507257 FAM72DQ6L9T8 149 aa17.81■□□□□ 0.44
NUP54-205ENST00000507257 FAM72BQ86X60 149 aa17.81■□□□□ 0.44
NUP54-205ENST00000507257 SPPL2CQ8IUH8 684 aa17.81■□□□□ 0.44
NUP54-205ENST00000507257 DDIASQ8IXT1 998 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms