RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 RGRP47804 291 aa20.08■□□□□ 0.81
UBE2D3-220ENST00000505307 UCNP55089 124 aa20.08■□□□□ 0.81
UBE2D3-220ENST00000505307 SRP54P61011 504 aaKnown RBP20.08■□□□□ 0.81
UBE2D3-220ENST00000505307 DPYSQ14117 519 aa20.08■□□□□ 0.81
UBE2D3-220ENST00000505307 ALG11Q2TAA5 492 aa20.08■□□□□ 0.81
UBE2D3-220ENST00000505307 BROXQ5VW32 411 aa20.08■□□□□ 0.81
UBE2D3-220ENST00000505307 GPR155Q7Z3F1 870 aa20.08■□□□□ 0.81
UBE2D3-220ENST00000505307 ZSWIM9Q86XI8 627 aa20.08■□□□□ 0.81
UBE2D3-220ENST00000505307 TSACCQ96A04 125 aaPredicted RBP20.08■□□□□ 0.81
UBE2D3-220ENST00000505307 FCRL3Q96P31 734 aaPredicted RBP20.08■□□□□ 0.81
UBE2D3-220ENST00000505307 BBC3Q96PG8 261 aaPredicted RBP20.08■□□□□ 0.81
UBE2D3-220ENST00000505307 TRIM7Q9C029 511 aa20.08■□□□□ 0.81
UBE2D3-220ENST00000505307 KCTD5Q9NXV2 234 aa20.08■□□□□ 0.81
UBE2D3-220ENST00000505307 KLQ9UEF7 1012 aa20.08■□□□□ 0.81
UBE2D3-220ENST00000505307 PCDHGA8Q9Y5G5 932 aa20.08■□□□□ 0.81
UBE2D3-220ENST00000505307 RAI2Q9Y5P3 530 aa20.08■□□□□ 0.81
UBE2D3-220ENST00000505307 DGKBQ9Y6T7 804 aa20.08■□□□□ 0.81
UBE2D3-220ENST00000505307 TEX51A0A1B0GUA7 166 aa20.07■□□□□ 0.8
UBE2D3-220ENST00000505307 CACNB4O00305 520 aaPredicted RBP20.07■□□□□ 0.8
UBE2D3-220ENST00000505307 SERPINC1P01008 464 aa20.07■□□□□ 0.8
UBE2D3-220ENST00000505307 TNFP01375 233 aa20.07■□□□□ 0.8
UBE2D3-220ENST00000505307 ELFN1P0C7U0 828 aa20.07■□□□□ 0.8
UBE2D3-220ENST00000505307 NFKBIAP25963 317 aa20.07■□□□□ 0.8
UBE2D3-220ENST00000505307 SCNN1BP51168 640 aa20.07■□□□□ 0.8
UBE2D3-220ENST00000505307 KIAA1024LP59773 190 aa20.07■□□□□ 0.8
UBE2D3-220ENST00000505307 LBRQ14739 615 aaKnown RBP20.07■□□□□ 0.8
UBE2D3-220ENST00000505307 NR1I3Q14994 352 aa20.07■□□□□ 0.8
UBE2D3-220ENST00000505307 DPYSL2Q16555 572 aa20.07■□□□□ 0.8
UBE2D3-220ENST00000505307 PERM1Q5SV97 790 aa20.07■□□□□ 0.8
UBE2D3-220ENST00000505307 E4F1Q66K89 784 aaPredicted RBP20.07■□□□□ 0.8
UBE2D3-220ENST00000505307 LIPIQ6XZB0 460 aa20.07■□□□□ 0.8
UBE2D3-220ENST00000505307 DPPA4Q7L190 304 aa20.07■□□□□ 0.8
UBE2D3-220ENST00000505307 NPWQ8N729 165 aa20.07■□□□□ 0.8
UBE2D3-220ENST00000505307 NAP1L5Q96NT1 182 aaPredicted RBP20.07■□□□□ 0.8
UBE2D3-220ENST00000505307 CCDC3Q9BQI4 270 aa20.07■□□□□ 0.8
UBE2D3-220ENST00000505307 DPH1Q9BZG8 443 aa20.07■□□□□ 0.8
UBE2D3-220ENST00000505307 ASCL3Q9NQ33 180 aa20.07■□□□□ 0.8
UBE2D3-220ENST00000505307 MYO1AQ9UBC5 1043 aa20.07■□□□□ 0.8
UBE2D3-220ENST00000505307 OR1A2Q9Y585 309 aa20.07■□□□□ 0.8
UBE2D3-220ENST00000505307 ENTPD2Q9Y5L3 495 aa20.07■□□□□ 0.8
UBE2D3-220ENST00000505307 TRAFD1O14545 582 aaPredicted RBP20.06■□□□□ 0.8
UBE2D3-220ENST00000505307 TNFRSF10CO14798 259 aa20.06■□□□□ 0.8
UBE2D3-220ENST00000505307 RECQL5O94762 991 aaPredicted RBP20.06■□□□□ 0.8
UBE2D3-220ENST00000505307 PCCBP05166 539 aa20.06■□□□□ 0.8
UBE2D3-220ENST00000505307 RALGDSQ12967 914 aa20.06■□□□□ 0.8
UBE2D3-220ENST00000505307 SPIDRQ14159 915 aa20.06■□□□□ 0.8
UBE2D3-220ENST00000505307 PIGHQ14442 188 aaPredicted RBP20.06■□□□□ 0.8
UBE2D3-220ENST00000505307 RD3Q7Z3Z2 195 aa20.06■□□□□ 0.8
UBE2D3-220ENST00000505307 BBS5Q8N3I7 341 aa20.06■□□□□ 0.8
UBE2D3-220ENST00000505307 PCDH19Q8TAB3 1148 aa20.06■□□□□ 0.8
UBE2D3-220ENST00000505307 SYN2Q92777 582 aaPredicted RBP20.06■□□□□ 0.8
UBE2D3-220ENST00000505307 CCDC97Q96F63 343 aaPredicted RBP20.06■□□□□ 0.8
UBE2D3-220ENST00000505307 ATXN7L3BQ96GX2 97 aa20.06■□□□□ 0.8
UBE2D3-220ENST00000505307 SLC46A1Q96NT5 459 aa20.06■□□□□ 0.8
UBE2D3-220ENST00000505307 RBM15Q96T37 977 aaKnown RBP eCLIP20.06■□□□□ 0.82e-7■■■□□ 16.3
UBE2D3-220ENST00000505307 GULP1Q9UBP9 304 aa20.06■□□□□ 0.8
UBE2D3-220ENST00000505307 GPR34Q9UPC5 381 aa20.06■□□□□ 0.8
UBE2D3-220ENST00000505307 SATB2Q9UPW6 733 aa20.06■□□□□ 0.8
UBE2D3-220ENST00000505307 TMX2-CTNND1H3BSU7 103 aa20.05■□□□□ 0.8
UBE2D3-220ENST00000505307 PDE2AO00408 941 aaPredicted RBP20.05■□□□□ 0.8
UBE2D3-220ENST00000505307 ATXN7O15265 892 aaPredicted RBP20.05■□□□□ 0.8
UBE2D3-220ENST00000505307 SOCS5O75159 536 aa20.05■□□□□ 0.8
UBE2D3-220ENST00000505307 SKILP12757 684 aa20.05■□□□□ 0.8
UBE2D3-220ENST00000505307 TRIM23P36406 574 aa20.05■□□□□ 0.8
UBE2D3-220ENST00000505307 TPM4P67936 248 aa20.05■□□□□ 0.8
UBE2D3-220ENST00000505307 ZNF235Q14590 738 aa20.05■□□□□ 0.8
UBE2D3-220ENST00000505307 C3orf38Q5JPI3 329 aa20.05■□□□□ 0.8
UBE2D3-220ENST00000505307 RALGPS1Q5JS13 557 aa20.05■□□□□ 0.8
UBE2D3-220ENST00000505307 TMCO3Q6UWJ1 677 aa20.05■□□□□ 0.8
UBE2D3-220ENST00000505307 ARHGAP36Q6ZRI8 547 aa20.05■□□□□ 0.8
UBE2D3-220ENST00000505307 ARL14Q8N4G2 192 aa20.05■□□□□ 0.8
UBE2D3-220ENST00000505307 OR56A4Q8NGH8 313 aa20.05■□□□□ 0.8
UBE2D3-220ENST00000505307 WDR36Q8NI36 951 aaKnown RBP20.05■□□□□ 0.8
UBE2D3-220ENST00000505307 TEKT4Q8WW24 435 aa20.05■□□□□ 0.8
UBE2D3-220ENST00000505307 KCNE4Q8WWG9 221 aa20.05■□□□□ 0.8
UBE2D3-220ENST00000505307 IQCDQ96DY2 449 aa20.05■□□□□ 0.8
UBE2D3-220ENST00000505307 RP1P56715 2156 aa20.05■□□□□ 0.8
UBE2D3-220ENST00000505307 A0A1W2PQJ5 194 aa20.04■□□□□ 0.8
UBE2D3-220ENST00000505307 NTN3O00634 580 aaPredicted RBP20.04■□□□□ 0.8
UBE2D3-220ENST00000505307 PRKCGP05129 697 aa20.04■□□□□ 0.8
UBE2D3-220ENST00000505307 CELA2BP08218 269 aaPredicted RBP20.04■□□□□ 0.8
UBE2D3-220ENST00000505307 SERPINB6P35237 376 aa20.04■□□□□ 0.8
UBE2D3-220ENST00000505307 TMPRSS3P57727 454 aa20.04■□□□□ 0.8
UBE2D3-220ENST00000505307 SLC10A7Q0GE19 358 aa20.04■□□□□ 0.8
UBE2D3-220ENST00000505307 IQCB1Q15051 598 aa20.04■□□□□ 0.8
UBE2D3-220ENST00000505307 CAVIN1Q6NZI2 390 aaKnown RBP20.04■□□□□ 0.8
UBE2D3-220ENST00000505307 CRTC1Q6UUV9 634 aa20.04■□□□□ 0.8
UBE2D3-220ENST00000505307 POLNQ7Z5Q5 900 aa20.04■□□□□ 0.8
UBE2D3-220ENST00000505307 LRRC49Q8IUZ0 686 aa20.04■□□□□ 0.8
UBE2D3-220ENST00000505307 KYQ8NBH2 561 aa20.04■□□□□ 0.8
UBE2D3-220ENST00000505307 NSMCE1Q8WV22 266 aa20.04■□□□□ 0.8
UBE2D3-220ENST00000505307 LRRK1Q38SD2 2015 aa20.03■□□□□ 0.8
UBE2D3-220ENST00000505307 CCDC187A0A096LP49 1063 aa20.03■□□□□ 0.8
UBE2D3-220ENST00000505307 HTRA2O43464 458 aaPredicted RBP20.03■□□□□ 0.8
UBE2D3-220ENST00000505307 IL1R2P27930 398 aa20.03■□□□□ 0.8
UBE2D3-220ENST00000505307 EIF3IQ13347 325 aaKnown RBP20.03■□□□□ 0.8
UBE2D3-220ENST00000505307 TSR1Q2NL82 804 aaKnown RBP20.03■□□□□ 0.8
UBE2D3-220ENST00000505307 TDRD12Q587J7 1177 aaKnown RBP20.03■□□□□ 0.8
UBE2D3-220ENST00000505307 NIPA2Q8N8Q9 360 aa20.03■□□□□ 0.8
UBE2D3-220ENST00000505307 PLA2G15Q8NCC3 412 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms