RNA–Protein interactions for RNA: ENST00000503842.5

PRDM2-213, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-213ENST00000503842 OR2T3Q8NH03 318 aa13.4□□□□□ -0.26
PRDM2-213ENST00000503842 RPLP0P6Q8NHW5 317 aa13.4□□□□□ -0.26
PRDM2-213ENST00000503842 PIP4K2CQ8TBX8 421 aa13.4□□□□□ -0.26
PRDM2-213ENST00000503842 PDCD6IPQ8WUM4 868 aaKnown RBP13.4□□□□□ -0.26
PRDM2-213ENST00000503842 KLHL32Q96NJ5 620 aa13.4□□□□□ -0.26
PRDM2-213ENST00000503842 NELL2Q99435 816 aa13.4□□□□□ -0.26
PRDM2-213ENST00000503842 RSPH9Q9H1X1 276 aaPredicted RBP13.4□□□□□ -0.26
PRDM2-213ENST00000503842 TBC1D17Q9HA65 648 aa13.4□□□□□ -0.26
PRDM2-213ENST00000503842 FBRSQ9HAH7 460 aa13.4□□□□□ -0.26
PRDM2-213ENST00000503842 SYBUQ9NX95 663 aa13.4□□□□□ -0.26
PRDM2-213ENST00000503842 SARDHQ9UL12 918 aa13.4□□□□□ -0.26
PRDM2-213ENST00000503842 MMP17Q9ULZ9 603 aa13.4□□□□□ -0.26
PRDM2-213ENST00000503842 PPIL1Q9Y3C6 166 aa13.4□□□□□ -0.26
PRDM2-213ENST00000503842 MTF2Q9Y483 593 aaPredicted RBP13.4□□□□□ -0.26
PRDM2-213ENST00000503842 NCOR1O75376 2440 aa13.39□□□□□ -0.27
PRDM2-213ENST00000503842 CHURC1-FNTBB4DL54 471 aa13.39□□□□□ -0.27
PRDM2-213ENST00000503842 ANKRD66B4E2M5 251 aa13.39□□□□□ -0.27
PRDM2-213ENST00000503842 S1PR4O95977 384 aa13.39□□□□□ -0.27
PRDM2-213ENST00000503842 HOXB2P14652 356 aa13.39□□□□□ -0.27
PRDM2-213ENST00000503842 ITGB7P26010 798 aa13.39□□□□□ -0.27
PRDM2-213ENST00000503842 ELK3P41970 407 aa13.39□□□□□ -0.27
PRDM2-213ENST00000503842 CRADDP78560 199 aa13.39□□□□□ -0.27
PRDM2-213ENST00000503842 STARD3Q14849 445 aa13.39□□□□□ -0.27
PRDM2-213ENST00000503842 CCDC38Q502W7 563 aa13.39□□□□□ -0.27
PRDM2-213ENST00000503842 EOGTQ5NDL2 527 aa13.39□□□□□ -0.27
PRDM2-213ENST00000503842 PKN3Q6P5Z2 889 aa13.39□□□□□ -0.27
PRDM2-213ENST00000503842 BRAT1Q6PJG6 821 aa13.39□□□□□ -0.27
PRDM2-213ENST00000503842 Q6ZS52 159 aa13.39□□□□□ -0.27
PRDM2-213ENST00000503842 ZBED8Q8IZ13 594 aa13.39□□□□□ -0.27
PRDM2-213ENST00000503842 MREGQ8N565 214 aa13.39□□□□□ -0.27
PRDM2-213ENST00000503842 ANKRD7Q92527 254 aa13.39□□□□□ -0.27
PRDM2-213ENST00000503842 ARRDC3Q96B67 414 aa13.39□□□□□ -0.27
PRDM2-213ENST00000503842 RMDN1Q96DB5 314 aa13.39□□□□□ -0.27
PRDM2-213ENST00000503842 SMIM14Q96QK8 99 aa13.39□□□□□ -0.27
PRDM2-213ENST00000503842 RANBP9Q96S59 729 aa13.39□□□□□ -0.27
PRDM2-213ENST00000503842 EBNA1BP2Q99848 306 aaKnown RBP13.39□□□□□ -0.27
PRDM2-213ENST00000503842 FOXQ1Q9C009 403 aa13.39□□□□□ -0.27
PRDM2-213ENST00000503842 IL22Q9GZX6 179 aa13.39□□□□□ -0.27
PRDM2-213ENST00000503842 CDC42EP4Q9H3Q1 356 aaKnown RBP13.39□□□□□ -0.27
PRDM2-213ENST00000503842 LMAN1LQ9HAT1 526 aa13.39□□□□□ -0.27
PRDM2-213ENST00000503842 ARGLU1Q9NWB6 273 aaPredicted RBP13.39□□□□□ -0.27
PRDM2-213ENST00000503842 PHTF1Q9UMS5 762 aa13.39□□□□□ -0.27
PRDM2-213ENST00000503842 CHMP2BQ9UQN3 213 aa13.39□□□□□ -0.27
PRDM2-213ENST00000503842 SPO11Q9Y5K1 396 aa13.39□□□□□ -0.27
PRDM2-213ENST00000503842 MYLKQ15746 1914 aa13.39□□□□□ -0.27
PRDM2-213ENST00000503842 A0A0J9YYE9 177 aa13.38□□□□□ -0.27
PRDM2-213ENST00000503842 FAM170BA6NMN3 283 aa13.38□□□□□ -0.27
PRDM2-213ENST00000503842 C1QTNF3-AMACRE9PGA6 284 aa13.38□□□□□ -0.27
PRDM2-213ENST00000503842 TRBC1P01850 177 aa13.38□□□□□ -0.27
PRDM2-213ENST00000503842 PRKCGP05129 697 aa13.38□□□□□ -0.27
PRDM2-213ENST00000503842 TIMP2P16035 220 aa13.38□□□□□ -0.27
PRDM2-213ENST00000503842 SLC8A1P32418 973 aa13.38□□□□□ -0.27
PRDM2-213ENST00000503842 PSMD8P48556 350 aa13.38□□□□□ -0.27
PRDM2-213ENST00000503842 METAP1P53582 386 aa13.38□□□□□ -0.27
PRDM2-213ENST00000503842 COPAP53621 1224 aa13.38□□□□□ -0.27
PRDM2-213ENST00000503842 PMS2P54278 862 aa13.38□□□□□ -0.27
PRDM2-213ENST00000503842 EPHB1P54762 984 aa13.38□□□□□ -0.27
PRDM2-213ENST00000503842 SATB1Q01826 763 aa13.38□□□□□ -0.27
PRDM2-213ENST00000503842 POU6F1Q14863 301 aa13.38□□□□□ -0.27
PRDM2-213ENST00000503842 UBXN2BQ14CS0 331 aa13.38□□□□□ -0.27
PRDM2-213ENST00000503842 PCID2Q5JVF3 399 aa13.38□□□□□ -0.27
PRDM2-213ENST00000503842 HP1BP3Q5SSJ5 553 aaPredicted RBP13.38□□□□□ -0.27
PRDM2-213ENST00000503842 CFAP58Q5T655 872 aa13.38□□□□□ -0.27
PRDM2-213ENST00000503842 STEAP4Q687X5 459 aa13.38□□□□□ -0.27
PRDM2-213ENST00000503842 TRMT10CQ7L0Y3 403 aaKnown RBP13.38□□□□□ -0.27
PRDM2-213ENST00000503842 PARS2Q7L3T8 475 aaKnown RBP13.38□□□□□ -0.27
PRDM2-213ENST00000503842 ANKMY2Q8IV38 441 aa13.38□□□□□ -0.27
PRDM2-213ENST00000503842 MMAAQ8IVH4 418 aaKnown RBP13.38□□□□□ -0.27
PRDM2-213ENST00000503842 FBXO36Q8NEA4 188 aa13.38□□□□□ -0.27
PRDM2-213ENST00000503842 PYROXD1Q8WU10 500 aa13.38□□□□□ -0.27
PRDM2-213ENST00000503842 CLDN23Q96B33 292 aa13.38□□□□□ -0.27
PRDM2-213ENST00000503842 STAMBPL1Q96FJ0 436 aa13.38□□□□□ -0.27
PRDM2-213ENST00000503842 C9orf72Q96LT7 481 aa13.38□□□□□ -0.27
PRDM2-213ENST00000503842 MCCC1Q96RQ3 725 aaPredicted RBP13.38□□□□□ -0.27
PRDM2-213ENST00000503842 LYSMD1Q96S90 227 aa13.38□□□□□ -0.27
PRDM2-213ENST00000503842 NAT9Q9BTE0 207 aa13.38□□□□□ -0.27
PRDM2-213ENST00000503842 KIFC1Q9BW19 673 aa13.38□□□□□ -0.27
PRDM2-213ENST00000503842 OSBPL6Q9BZF3 934 aa13.38□□□□□ -0.27
PRDM2-213ENST00000503842 EPB41L4BQ9H329 900 aa13.38□□□□□ -0.27
PRDM2-213ENST00000503842 SEMA4AQ9H3S1 761 aa13.38□□□□□ -0.27
PRDM2-213ENST00000503842 PLAC1Q9HBJ0 212 aa13.38□□□□□ -0.27
PRDM2-213ENST00000503842 MRM3Q9HC36 420 aaKnown RBP13.38□□□□□ -0.27
PRDM2-213ENST00000503842 NINJ2Q9NZG7 142 aa13.38□□□□□ -0.27
PRDM2-213ENST00000503842 SOX13Q9UN79 622 aa13.38□□□□□ -0.27
PRDM2-213ENST00000503842 TCAF1Q9Y4C2 921 aa13.38□□□□□ -0.27
PRDM2-213ENST00000503842 CAPN8A6NHC0 703 aa13.37□□□□□ -0.27
PRDM2-213ENST00000503842 C16orf96A6NNT2 1141 aa13.37□□□□□ -0.27
PRDM2-213ENST00000503842 UPK3BL1B0FP48 263 aa13.37□□□□□ -0.27
PRDM2-213ENST00000503842 UPK3BL2E5RIL1 263 aa13.37□□□□□ -0.27
PRDM2-213ENST00000503842 KPNA3O00505 521 aaPredicted RBP13.37□□□□□ -0.27
PRDM2-213ENST00000503842 DYNC1I1O14576 645 aa13.37□□□□□ -0.27
PRDM2-213ENST00000503842 IL1BP01584 269 aa13.37□□□□□ -0.27
PRDM2-213ENST00000503842 PIRTP0C851 137 aa13.37□□□□□ -0.27
PRDM2-213ENST00000503842 TSHRP16473 764 aa13.37□□□□□ -0.27
PRDM2-213ENST00000503842 CTPS1P17812 591 aa13.37□□□□□ -0.27
PRDM2-213ENST00000503842 ADRA1DP25100 572 aa13.37□□□□□ -0.27
PRDM2-213ENST00000503842 RPS14P62263 151 aaKnown RBP13.37□□□□□ -0.27
PRDM2-213ENST00000503842 POLR2LP62875 67 aaKnown RBP13.37□□□□□ -0.27
PRDM2-213ENST00000503842 GAS6Q14393 721 aa13.37□□□□□ -0.27
PRDM2-213ENST00000503842 CST6Q15828 149 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms