RNA–Protein interactions for RNA: ENST00000502393.5

SFXN1-203, Transcript of sideroflexin 1, humanhuman

TSL 2 BASIC

Gene SFXN1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-203ENST00000502393 LIPIQ6XZB0 460 aa19.83■□□□□ 0.77
SFXN1-203ENST00000502393 HID1Q8IV36 788 aa19.83■□□□□ 0.77
SFXN1-203ENST00000502393 SLC35F3Q8IY50 421 aa19.83■□□□□ 0.77
SFXN1-203ENST00000502393 LSMEM2Q8N112 164 aa19.83■□□□□ 0.77
SFXN1-203ENST00000502393 PAF1Q8N7H5 531 aa19.83■□□□□ 0.77
SFXN1-203ENST00000502393 SPOCK2Q92563 424 aa19.83■□□□□ 0.77
SFXN1-203ENST00000502393 TSACCQ96A04 125 aaPredicted RBP19.83■□□□□ 0.77
SFXN1-203ENST00000502393 CSPG4P5Q96PW8 444 aa19.83■□□□□ 0.77
SFXN1-203ENST00000502393 ETNK2Q9NVF9 386 aa19.83■□□□□ 0.77
SFXN1-203ENST00000502393 IP6K2Q9UHH9 426 aa19.83■□□□□ 0.77
SFXN1-203ENST00000502393 DOLKQ9UPQ8 538 aa19.83■□□□□ 0.77
SFXN1-203ENST00000502393 CACNA1GO43497 2377 aa19.82■□□□□ 0.76
SFXN1-203ENST00000502393 A0A1W2PQ67 120 aa19.82■□□□□ 0.76
SFXN1-203ENST00000502393 TCEA3O75764 348 aa19.82■□□□□ 0.76
SFXN1-203ENST00000502393 RECQL5O94762 991 aaPredicted RBP19.82■□□□□ 0.76
SFXN1-203ENST00000502393 PEX11BO96011 259 aa19.82■□□□□ 0.76
SFXN1-203ENST00000502393 PCCBP05166 539 aa19.82■□□□□ 0.76
SFXN1-203ENST00000502393 CYP1A2P05177 515 aa19.82■□□□□ 0.76
SFXN1-203ENST00000502393 ITPKBP27987 946 aa19.82■□□□□ 0.76
SFXN1-203ENST00000502393 LSSP48449 732 aa19.82■□□□□ 0.76
SFXN1-203ENST00000502393 SRP54P61011 504 aaKnown RBP19.82■□□□□ 0.76
SFXN1-203ENST00000502393 RALGDSQ12967 914 aa19.82■□□□□ 0.76
SFXN1-203ENST00000502393 ZNF235Q14590 738 aa19.82■□□□□ 0.76
SFXN1-203ENST00000502393 ISXQ2M1V0 245 aa19.82■□□□□ 0.76
SFXN1-203ENST00000502393 DPPA4Q7L190 304 aa19.82■□□□□ 0.76
SFXN1-203ENST00000502393 WDR48Q8TAF3 677 aa19.82■□□□□ 0.76
SFXN1-203ENST00000502393 CPLX3Q8WVH0 158 aa19.82■□□□□ 0.76
SFXN1-203ENST00000502393 WDR92Q96MX6 357 aa19.82■□□□□ 0.76
SFXN1-203ENST00000502393 ZNF578Q96N58 590 aaPredicted RBP19.82■□□□□ 0.76
SFXN1-203ENST00000502393 KLQ9UEF7 1012 aa19.82■□□□□ 0.76
SFXN1-203ENST00000502393 ANAPC7Q9UJX3 599 aa19.82■□□□□ 0.76
SFXN1-203ENST00000502393 PADI4Q9UM07 663 aa19.82■□□□□ 0.76
SFXN1-203ENST00000502393 LUC7L2Q9Y383 392 aaKnown RBP19.82■□□□□ 0.76
SFXN1-203ENST00000502393 A0A087X0T9 212 aa19.81■□□□□ 0.76
SFXN1-203ENST00000502393 GOLGA6L19H0YKK7 550 aa19.81■□□□□ 0.76
SFXN1-203ENST00000502393 HTRA2O43464 458 aaPredicted RBP19.81■□□□□ 0.76
SFXN1-203ENST00000502393 MAFKO60675 156 aa19.81■□□□□ 0.76
SFXN1-203ENST00000502393 SOCS5O75159 536 aa19.81■□□□□ 0.76
SFXN1-203ENST00000502393 DXOO77932 396 aaKnown RBP19.81■□□□□ 0.76
SFXN1-203ENST00000502393 MPOP05164 745 aa19.81■□□□□ 0.76
SFXN1-203ENST00000502393 CELA2BP08218 269 aaPredicted RBP19.81■□□□□ 0.76
SFXN1-203ENST00000502393 FAM228BP0C875 321 aa19.81■□□□□ 0.76
SFXN1-203ENST00000502393 SERPINB6P35237 376 aa19.81■□□□□ 0.76
SFXN1-203ENST00000502393 GABREP78334 506 aa19.81■□□□□ 0.76
SFXN1-203ENST00000502393 SLC25A11Q02978 314 aaKnown RBP19.81■□□□□ 0.76
SFXN1-203ENST00000502393 PERM1Q5SV97 790 aa19.81■□□□□ 0.76
SFXN1-203ENST00000502393 TXNRD3NBQ6F5E7 133 aa19.81■□□□□ 0.76
SFXN1-203ENST00000502393 GKN2Q86XP6 184 aa19.81■□□□□ 0.76
SFXN1-203ENST00000502393 BBS5Q8N3I7 341 aa19.81■□□□□ 0.76
SFXN1-203ENST00000502393 PLA2G15Q8NCC3 412 aa19.81■□□□□ 0.76
SFXN1-203ENST00000502393 NSMCE3Q96MG7 304 aa19.81■□□□□ 0.76
SFXN1-203ENST00000502393 NUDCD1Q96RS6 583 aa19.81■□□□□ 0.76
SFXN1-203ENST00000502393 NUP85Q9BW27 656 aa19.81■□□□□ 0.76
SFXN1-203ENST00000502393 POLR1BQ9H9Y6 1135 aa19.81■□□□□ 0.76
SFXN1-203ENST00000502393 DGKBQ9Y6T7 804 aa19.81■□□□□ 0.76
SFXN1-203ENST00000502393 LRRK1Q38SD2 2015 aa19.81■□□□□ 0.76
SFXN1-203ENST00000502393 MYO1FO00160 1098 aa19.8■□□□□ 0.76
SFXN1-203ENST00000502393 CACNB4O00305 520 aaPredicted RBP19.8■□□□□ 0.76
SFXN1-203ENST00000502393 TNFP01375 233 aa19.8■□□□□ 0.76
SFXN1-203ENST00000502393 HOXC4P09017 264 aaPredicted RBP19.8■□□□□ 0.76
SFXN1-203ENST00000502393 CR2P20023 1033 aa19.8■□□□□ 0.76
SFXN1-203ENST00000502393 NFKBIAP25963 317 aa19.8■□□□□ 0.76
SFXN1-203ENST00000502393 TRIM23P36406 574 aa19.8■□□□□ 0.76
SFXN1-203ENST00000502393 CDH6P55285 790 aa19.8■□□□□ 0.76
SFXN1-203ENST00000502393 KIAA1024LP59773 190 aa19.8■□□□□ 0.76
SFXN1-203ENST00000502393 NFKBIBQ15653 356 aa19.8■□□□□ 0.76
SFXN1-203ENST00000502393 SOWAHCQ53LP3 525 aaPredicted RBP19.8■□□□□ 0.76
SFXN1-203ENST00000502393 RALGPS1Q5JS13 557 aa19.8■□□□□ 0.76
SFXN1-203ENST00000502393 ALKBH5Q6P6C2 394 aaKnown RBP19.8■□□□□ 0.76
SFXN1-203ENST00000502393 RBM44Q6ZP01 1051 aaKnown RBP19.8■□□□□ 0.76
SFXN1-203ENST00000502393 RD3Q7Z3Z2 195 aa19.8■□□□□ 0.76
SFXN1-203ENST00000502393 LRRC49Q8IUZ0 686 aa19.8■□□□□ 0.76
SFXN1-203ENST00000502393 ATPAF2Q8N5M1 289 aa19.8■□□□□ 0.76
SFXN1-203ENST00000502393 ARL10Q8N8L6 244 aa19.8■□□□□ 0.76
SFXN1-203ENST00000502393 NSMCE1Q8WV22 266 aa19.8■□□□□ 0.76
SFXN1-203ENST00000502393 CRELD1Q96HD1 420 aa19.8■□□□□ 0.76
SFXN1-203ENST00000502393 BTBD6Q96KE9 485 aa19.8■□□□□ 0.76
SFXN1-203ENST00000502393 MGME1Q9BQP7 344 aa19.8■□□□□ 0.76
SFXN1-203ENST00000502393 PCDH18Q9HCL0 1135 aa19.8■□□□□ 0.76
SFXN1-203ENST00000502393 RCOR3Q9P2K3 495 aaPredicted RBP19.8■□□□□ 0.76
SFXN1-203ENST00000502393 KELP23276 732 aa19.79■□□□□ 0.76
SFXN1-203ENST00000502393 ERVPABLB-1P60509 514 aa19.79■□□□□ 0.76
SFXN1-203ENST00000502393 MARC1Q5VT66 337 aa19.79■□□□□ 0.76
SFXN1-203ENST00000502393 PGBD5Q8N414 524 aa19.79■□□□□ 0.76
SFXN1-203ENST00000502393 OR56A4Q8NGH8 313 aa19.79■□□□□ 0.76
SFXN1-203ENST00000502393 PCDH19Q8TAB3 1148 aa19.79■□□□□ 0.76
SFXN1-203ENST00000502393 FAM71BQ8TC56 605 aa19.79■□□□□ 0.76
SFXN1-203ENST00000502393 FUBP1Q96AE4 644 aaKnown RBP19.79■□□□□ 0.76
SFXN1-203ENST00000502393 RBM15Q96T37 977 aaKnown RBP eCLIP19.79■□□□□ 0.761e-6■□□□□ 8.7
SFXN1-203ENST00000502393 CCDC3Q9BQI4 270 aa19.79■□□□□ 0.76
SFXN1-203ENST00000502393 KCTD5Q9NXV2 234 aa19.79■□□□□ 0.76
SFXN1-203ENST00000502393 GULP1Q9UBP9 304 aa19.79■□□□□ 0.76
SFXN1-203ENST00000502393 B4GALT6Q9UBX8 382 aa19.79■□□□□ 0.76
SFXN1-203ENST00000502393 PCDHGC4Q9Y5F7 938 aa19.79■□□□□ 0.76
SFXN1-203ENST00000502393 ANKRD36A6QL64 1941 aa19.78■□□□□ 0.76
SFXN1-203ENST00000502393 TTC24A2A3L6 582 aaPredicted RBP19.78■□□□□ 0.76
SFXN1-203ENST00000502393 A8MX80 341 aa19.78■□□□□ 0.76
SFXN1-203ENST00000502393 TNFRSF10CO14798 259 aa19.78■□□□□ 0.76
SFXN1-203ENST00000502393 GYPCP04921 128 aa19.78■□□□□ 0.76
SFXN1-203ENST00000502393 GM2AP17900 193 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms