RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 KYAT3Q6YP21 454 aaKnown RBP8.33□□□□□ -1.08
HDAC6-221ENST00000477561 KANSL1Q7Z3B3 1105 aa8.33□□□□□ -1.08
HDAC6-221ENST00000477561 RAB44Q7Z6P3 723 aaPredicted RBP8.33□□□□□ -1.08
HDAC6-221ENST00000477561 GLRX5Q86SX6 157 aa8.33□□□□□ -1.08
HDAC6-221ENST00000477561 MAP7D3Q8IWC1 876 aa8.33□□□□□ -1.08
HDAC6-221ENST00000477561 BBS5Q8N3I7 341 aa8.33□□□□□ -1.08
HDAC6-221ENST00000477561 TP53I13Q8NBR0 393 aaPredicted RBP8.33□□□□□ -1.08
HDAC6-221ENST00000477561 HCAR2Q8TDS4 363 aa8.33□□□□□ -1.08
HDAC6-221ENST00000477561 ASB12Q8WXK4 309 aa8.33□□□□□ -1.08
HDAC6-221ENST00000477561 ADAMTS14Q8WXS8 1223 aa8.33□□□□□ -1.08
HDAC6-221ENST00000477561 RNF157Q96PX1 679 aa8.33□□□□□ -1.08
HDAC6-221ENST00000477561 ZNF670Q9BS34 389 aa8.33□□□□□ -1.08
HDAC6-221ENST00000477561 GOLPH3Q9H4A6 298 aa8.33□□□□□ -1.08
HDAC6-221ENST00000477561 KLF15Q9UIH9 416 aa8.33□□□□□ -1.08
HDAC6-221ENST00000477561 ATP8A1Q9Y2Q0 1164 aa8.33□□□□□ -1.08
HDAC6-221ENST00000477561 TTLL3Q9Y4R7 772 aa8.33□□□□□ -1.08
HDAC6-221ENST00000477561 CAPN6Q9Y6Q1 641 aa8.33□□□□□ -1.08
HDAC6-221ENST00000477561 PCNX2A6NKB5 2137 aa8.33□□□□□ -1.08
HDAC6-221ENST00000477561 TP53BP1Q12888 1972 aaPredicted RBP8.33□□□□□ -1.08
HDAC6-221ENST00000477561 TRPM6Q9BX84 2022 aa8.32□□□□□ -1.08
HDAC6-221ENST00000477561 A0A0U1RQS6 177 aa8.32□□□□□ -1.08
HDAC6-221ENST00000477561 SPTY2D1-AS1A0A0U1RR47 76 aa8.32□□□□□ -1.08
HDAC6-221ENST00000477561 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.32□□□□□ -1.08
HDAC6-221ENST00000477561 TRIM38O00635 465 aa8.32□□□□□ -1.08
HDAC6-221ENST00000477561 YKT6O15498 198 aa8.32□□□□□ -1.08
HDAC6-221ENST00000477561 SIGLEC6O43699 453 aa8.32□□□□□ -1.08
HDAC6-221ENST00000477561 SPOPO43791 374 aa8.32□□□□□ -1.08
HDAC6-221ENST00000477561 PIAS2O75928 621 aa8.32□□□□□ -1.08
HDAC6-221ENST00000477561 NEBLO76041 1014 aa8.32□□□□□ -1.08
HDAC6-221ENST00000477561 KRT1P04264 644 aa8.32□□□□□ -1.08
HDAC6-221ENST00000477561 PCCBP05166 539 aa8.32□□□□□ -1.08
HDAC6-221ENST00000477561 MYF5P13349 255 aa8.32□□□□□ -1.08
HDAC6-221ENST00000477561 CR2P20023 1033 aa8.32□□□□□ -1.08
HDAC6-221ENST00000477561 COMTP21964 271 aa8.32□□□□□ -1.08
HDAC6-221ENST00000477561 MMP12P39900 470 aa8.32□□□□□ -1.08
HDAC6-221ENST00000477561 SUOXP51687 545 aa8.32□□□□□ -1.08
HDAC6-221ENST00000477561 THOP1P52888 689 aa8.32□□□□□ -1.08
HDAC6-221ENST00000477561 CLDN6P56747 220 aa8.32□□□□□ -1.08
HDAC6-221ENST00000477561 PFN3P60673 137 aa8.32□□□□□ -1.08
HDAC6-221ENST00000477561 POLR2LP62875 67 aaKnown RBP8.32□□□□□ -1.08
HDAC6-221ENST00000477561 DYNLT1P63172 113 aa8.32□□□□□ -1.08
HDAC6-221ENST00000477561 GALNT2Q10471 571 aa8.32□□□□□ -1.08
HDAC6-221ENST00000477561 TRAF2Q12933 501 aa8.32□□□□□ -1.08
HDAC6-221ENST00000477561 RALGDSQ12967 914 aa8.32□□□□□ -1.08
HDAC6-221ENST00000477561 EIF2B5Q13144 721 aaKnown RBP8.32□□□□□ -1.08
HDAC6-221ENST00000477561 LRRC14Q15048 493 aa8.32□□□□□ -1.08
HDAC6-221ENST00000477561 IRF4Q15306 451 aa8.32□□□□□ -1.08
HDAC6-221ENST00000477561 WSCD2Q2TBF2 565 aa8.32□□□□□ -1.08
HDAC6-221ENST00000477561 ODF2Q5BJF6 829 aa8.32□□□□□ -1.08
HDAC6-221ENST00000477561 DENND2CQ68D51 928 aa8.32□□□□□ -1.08
HDAC6-221ENST00000477561 DHRS13Q6UX07 377 aa8.32□□□□□ -1.08
HDAC6-221ENST00000477561 NPNTQ6UXI9 565 aa8.32□□□□□ -1.08
HDAC6-221ENST00000477561 B4GALNT4Q76KP1 1039 aa8.32□□□□□ -1.08
HDAC6-221ENST00000477561 DCP2Q8IU60 420 aaKnown RBP8.32□□□□□ -1.08
HDAC6-221ENST00000477561 CCNYQ8ND76 341 aa8.32□□□□□ -1.08
HDAC6-221ENST00000477561 DENND6BQ8NEG7 585 aa8.32□□□□□ -1.08
HDAC6-221ENST00000477561 TPCN2Q8NHX9 752 aa8.32□□□□□ -1.08
HDAC6-221ENST00000477561 FAM174AQ8TBP5 190 aa8.32□□□□□ -1.08
HDAC6-221ENST00000477561 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.32□□□□□ -1.08
HDAC6-221ENST00000477561 FAF2Q96CS3 445 aa8.32□□□□□ -1.08
HDAC6-221ENST00000477561 ECHDC3Q96DC8 303 aa8.32□□□□□ -1.08
HDAC6-221ENST00000477561 SMIM14Q96QK8 99 aa8.32□□□□□ -1.08
HDAC6-221ENST00000477561 NUDCD1Q96RS6 583 aa8.32□□□□□ -1.08
HDAC6-221ENST00000477561 SEMA3CQ99985 751 aa8.32□□□□□ -1.08
HDAC6-221ENST00000477561 MGME1Q9BQP7 344 aa8.32□□□□□ -1.08
HDAC6-221ENST00000477561 MAK16Q9BXY0 300 aaKnown RBP8.32□□□□□ -1.08
HDAC6-221ENST00000477561 TCEAL2Q9H3H9 227 aaPredicted RBP8.32□□□□□ -1.08
HDAC6-221ENST00000477561 GPR27Q9NS67 375 aa8.32□□□□□ -1.08
HDAC6-221ENST00000477561 RBM22Q9NW64 420 aaKnown RBP eCLIP8.32□□□□□ -1.08
HDAC6-221ENST00000477561 DTLQ9NZJ0 730 aa8.32□□□□□ -1.08
HDAC6-221ENST00000477561 SALL4Q9UJQ4 1053 aa8.32□□□□□ -1.08
HDAC6-221ENST00000477561 PNMA8BQ9ULN7 279 aaPredicted RBP8.32□□□□□ -1.08
HDAC6-221ENST00000477561 HEY1Q9Y5J3 304 aa8.32□□□□□ -1.08
HDAC6-221ENST00000477561 ASPMQ8IZT6 3477 aa8.32□□□□□ -1.08
HDAC6-221ENST00000477561 AKAP13Q12802 2813 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 FRYQ5TBA9 3013 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 GRID2IPA4D2P6 1211 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 FAM149AA5PLN7 773 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 C3orf70A6NLC5 250 aaPredicted RBP8.31□□□□□ -1.08
HDAC6-221ENST00000477561 KCNK1O00180 336 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 APOL1O14791 398 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 SCAMP1O15126 338 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 MATN3O15232 486 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 RECQL5O94762 991 aaPredicted RBP8.31□□□□□ -1.08
HDAC6-221ENST00000477561 CPP00450 1065 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 JCHAINP01591 159 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 CSF2P04141 144 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 ATP1A1P05023 1023 aaKnown RBP8.31□□□□□ -1.08
HDAC6-221ENST00000477561 PDHA1P08559 390 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 ELFN1P0C7U0 828 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 CCNB1P14635 433 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 JUNDP17535 347 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 CTPS1P17812 591 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 TCP1P17987 556 aaKnown RBP8.31□□□□□ -1.08
HDAC6-221ENST00000477561 CCNCP24863 283 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 HSPA9P38646 679 aaKnown RBP8.31□□□□□ -1.08
HDAC6-221ENST00000477561 HNRNPKP61978 463 aaKnown RBP eCLIP8.31□□□□□ -1.08
HDAC6-221ENST00000477561 DSC2Q02487 901 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 C1orf61Q13536 156 aa8.31□□□□□ -1.08
HDAC6-221ENST00000477561 IHHQ14623 411 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 245.8 ms