RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 FNTAP49354 379 aa15.02■□□□□ -0
CDC42SE1-203ENST00000470278 SNX1Q13596 522 aa15.02■□□□□ -0
CDC42SE1-203ENST00000470278 PARP6Q2NL67 630 aa15.02■□□□□ -0
CDC42SE1-203ENST00000470278 TMEM259Q4ZIN3 620 aa15.02■□□□□ -0
CDC42SE1-203ENST00000470278 PEAR1Q5VY43 1037 aaPredicted RBP15.02■□□□□ -0
CDC42SE1-203ENST00000470278 KIAA0895LQ68EN5 471 aa15.02■□□□□ -0
CDC42SE1-203ENST00000470278 KDELC1Q6UW63 502 aa15.02■□□□□ -0
CDC42SE1-203ENST00000470278 C4orf22Q6V702 233 aa15.02■□□□□ -0
CDC42SE1-203ENST00000470278 ARHGEF18Q6ZSZ5 1173 aa15.02■□□□□ -0
CDC42SE1-203ENST00000470278 USP45Q70EL2 814 aa15.02■□□□□ -0
CDC42SE1-203ENST00000470278 DPPA4Q7L190 304 aa15.02■□□□□ -0
CDC42SE1-203ENST00000470278 SLC41A1Q8IVJ1 513 aa15.02■□□□□ -0
CDC42SE1-203ENST00000470278 TMEFF1Q8IYR6 380 aa15.02■□□□□ -0
CDC42SE1-203ENST00000470278 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.02■□□□□ -0
CDC42SE1-203ENST00000470278 SPATA22Q8NHS9 363 aa15.02■□□□□ -0
CDC42SE1-203ENST00000470278 PDCD6IPQ8WUM4 868 aaKnown RBP15.02■□□□□ -0
CDC42SE1-203ENST00000470278 PIH1D2Q8WWB5 315 aa15.02■□□□□ -0
CDC42SE1-203ENST00000470278 DNASE2BQ8WZ79 361 aa15.02■□□□□ -0
CDC42SE1-203ENST00000470278 SCRN2Q96FV2 425 aa15.02■□□□□ -0
CDC42SE1-203ENST00000470278 OXNAD1Q96HP4 312 aaPredicted RBP15.02■□□□□ -0
CDC42SE1-203ENST00000470278 FEM1CQ96JP0 617 aa15.02■□□□□ -0
CDC42SE1-203ENST00000470278 HSPA12BQ96MM6 686 aa15.02■□□□□ -0
CDC42SE1-203ENST00000470278 LYSMD1Q96S90 227 aa15.02■□□□□ -0
CDC42SE1-203ENST00000470278 ADGRE3Q9BY15 652 aa15.02■□□□□ -0
CDC42SE1-203ENST00000470278 PCDH12Q9NPG4 1184 aa15.02■□□□□ -0
CDC42SE1-203ENST00000470278 AAR2Q9Y312 384 aaKnown RBP15.02■□□□□ -0
CDC42SE1-203ENST00000470278 DMXL2Q8TDJ6 3036 aa15.01□□□□□ -0.01
CDC42SE1-203ENST00000470278 A0A0J9YYE9 177 aa15.01□□□□□ -0.01
CDC42SE1-203ENST00000470278 CAPN8A6NHC0 703 aa15.01□□□□□ -0.01
CDC42SE1-203ENST00000470278 TRBC1P01850 177 aa15.01□□□□□ -0.01
CDC42SE1-203ENST00000470278 PDHA1P08559 390 aa15.01□□□□□ -0.01
CDC42SE1-203ENST00000470278 PTGER3P43115 390 aa15.01□□□□□ -0.01
CDC42SE1-203ENST00000470278 GEMP55040 296 aa15.01□□□□□ -0.01
CDC42SE1-203ENST00000470278 PPP2CBP62714 309 aa15.01□□□□□ -0.01
CDC42SE1-203ENST00000470278 RPS21P63220 83 aaKnown RBP15.01□□□□□ -0.01
CDC42SE1-203ENST00000470278 PPP2CAP67775 309 aa15.01□□□□□ -0.01
CDC42SE1-203ENST00000470278 CDK18Q07002 472 aa15.01□□□□□ -0.01
CDC42SE1-203ENST00000470278 PRPSAP1Q14558 356 aa15.01□□□□□ -0.01
CDC42SE1-203ENST00000470278 TMEM52BQ4KMG9 183 aa15.01□□□□□ -0.01
CDC42SE1-203ENST00000470278 FAM182AQ5T1J6 154 aa15.01□□□□□ -0.01
CDC42SE1-203ENST00000470278 LYSMD4Q5XG99 296 aa15.01□□□□□ -0.01
CDC42SE1-203ENST00000470278 TCEAL6Q6IPX3 200 aa15.01□□□□□ -0.01
CDC42SE1-203ENST00000470278 TTC27Q6P3X3 843 aa15.01□□□□□ -0.01
CDC42SE1-203ENST00000470278 HORMAD1Q86X24 394 aa15.01□□□□□ -0.01
CDC42SE1-203ENST00000470278 NDUFAF2Q8N183 169 aa15.01□□□□□ -0.01
CDC42SE1-203ENST00000470278 PAF1Q8N7H5 531 aa15.01□□□□□ -0.01
CDC42SE1-203ENST00000470278 CCDC89Q8N998 374 aa15.01□□□□□ -0.01
CDC42SE1-203ENST00000470278 ATL2Q8NHH9 583 aa15.01□□□□□ -0.01
CDC42SE1-203ENST00000470278 TCEAL3Q969E4 200 aa15.01□□□□□ -0.01
CDC42SE1-203ENST00000470278 MAGOHBQ96A72 148 aaKnown RBP15.01□□□□□ -0.01
CDC42SE1-203ENST00000470278 BIRC7Q96CA5 298 aa15.01□□□□□ -0.01
CDC42SE1-203ENST00000470278 CAPZA3Q96KX2 299 aa15.01□□□□□ -0.01
CDC42SE1-203ENST00000470278 ARRDC1-AS1Q9H2J1 176 aa15.01□□□□□ -0.01
CDC42SE1-203ENST00000470278 PAK5Q9P286 719 aa15.01□□□□□ -0.01
CDC42SE1-203ENST00000470278 CHKBQ9Y259 395 aa15.01□□□□□ -0.01
CDC42SE1-203ENST00000470278 ITM2BQ9Y287 266 aa15.01□□□□□ -0.01
CDC42SE1-203ENST00000470278 PCDHGA5Q9Y5G8 931 aa15.01□□□□□ -0.01
CDC42SE1-203ENST00000470278 TBC1D3DA0A087WVF3 549 aa15□□□□□ -0.01
CDC42SE1-203ENST00000470278 TBC1D3IA0A087WXS9 549 aa15□□□□□ -0.01
CDC42SE1-203ENST00000470278 TBC1D3EA0A087X179 549 aa15□□□□□ -0.01
CDC42SE1-203ENST00000470278 TBC1D3KA0A087X1G2 549 aa15□□□□□ -0.01
CDC42SE1-203ENST00000470278 LOC285095A0A1B0GVY8 99 aa15□□□□□ -0.01
CDC42SE1-203ENST00000470278 GOLGA6CA6NDK9 693 aa15□□□□□ -0.01
CDC42SE1-203ENST00000470278 GOLGA6BA6NDN3 693 aa15□□□□□ -0.01
CDC42SE1-203ENST00000470278 TBC1D3FA6NER0 549 aaPredicted RBP15□□□□□ -0.01
CDC42SE1-203ENST00000470278 FAM47DPA6NHR8 397 aa15□□□□□ -0.01
CDC42SE1-203ENST00000470278 MEI4A8MW99 385 aa15□□□□□ -0.01
CDC42SE1-203ENST00000470278 ANKRD66B4E2M5 251 aa15□□□□□ -0.01
CDC42SE1-203ENST00000470278 TBC1D3LB9A6J9 549 aa15□□□□□ -0.01
CDC42SE1-203ENST00000470278 CCDC188H7C350 402 aa15□□□□□ -0.01
CDC42SE1-203ENST00000470278 NEMP1O14524 444 aa15□□□□□ -0.01
CDC42SE1-203ENST00000470278 RNGTTO60942 597 aaKnown RBP15□□□□□ -0.01
CDC42SE1-203ENST00000470278 NDST3O95803 873 aa15□□□□□ -0.01
CDC42SE1-203ENST00000470278 IFNB1P01574 187 aa15□□□□□ -0.01
CDC42SE1-203ENST00000470278 TBC1D3HP0C7X1 549 aa15□□□□□ -0.01
CDC42SE1-203ENST00000470278 GOLGA6DP0CG33 693 aa15□□□□□ -0.01
CDC42SE1-203ENST00000470278 ACTN2P35609 894 aa15□□□□□ -0.01
CDC42SE1-203ENST00000470278 COILP38432 576 aaPredicted RBP15□□□□□ -0.01
CDC42SE1-203ENST00000470278 PAFAH1B1P43034 410 aa15□□□□□ -0.01
CDC42SE1-203ENST00000470278 LIMK1P53667 647 aa15□□□□□ -0.01
CDC42SE1-203ENST00000470278 WNT3AP56704 352 aa15□□□□□ -0.01
CDC42SE1-203ENST00000470278 RALGDSQ12967 914 aa15□□□□□ -0.01
CDC42SE1-203ENST00000470278 LRRC73Q5JTD7 316 aa15□□□□□ -0.01
CDC42SE1-203ENST00000470278 WDR45BQ5MNZ6 344 aa15□□□□□ -0.01
CDC42SE1-203ENST00000470278 SYCP2LQ5T4T6 812 aa15□□□□□ -0.01
CDC42SE1-203ENST00000470278 TBC1D3GQ6DHY5 549 aa15□□□□□ -0.01
CDC42SE1-203ENST00000470278 TBC1D3CQ6IPX1 549 aa15□□□□□ -0.01
CDC42SE1-203ENST00000470278 CCDC137Q6PK04 289 aaKnown RBP15□□□□□ -0.01
CDC42SE1-203ENST00000470278 TBC1D3Q8IZP1 549 aaPredicted RBP15□□□□□ -0.01
CDC42SE1-203ENST00000470278 GRK7Q8WTQ7 553 aa15□□□□□ -0.01
CDC42SE1-203ENST00000470278 ASB12Q8WXK4 309 aa15□□□□□ -0.01
CDC42SE1-203ENST00000470278 SLCO2A1Q92959 643 aa15□□□□□ -0.01
CDC42SE1-203ENST00000470278 IFT43Q96FT9 208 aa15□□□□□ -0.01
CDC42SE1-203ENST00000470278 MRGPRX2Q96LB1 330 aa15□□□□□ -0.01
CDC42SE1-203ENST00000470278 ORAI3Q9BRQ5 295 aa15□□□□□ -0.01
CDC42SE1-203ENST00000470278 MLPHQ9BV36 600 aaPredicted RBP15□□□□□ -0.01
CDC42SE1-203ENST00000470278 FSD1LQ9BXM9 530 aa15□□□□□ -0.01
CDC42SE1-203ENST00000470278 GOLGA6AQ9NYA3 693 aa15□□□□□ -0.01
CDC42SE1-203ENST00000470278 FEZ2Q9UHY8 353 aaPredicted RBP15□□□□□ -0.01
CDC42SE1-203ENST00000470278 GGT7Q9UJ14 662 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms