RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 TMC7Q7Z402 723 aa12.41□□□□□ -0.42
USP11-206ENST00000469080 NT5DC4Q86YG4 428 aa12.41□□□□□ -0.42
USP11-206ENST00000469080 CPNE9Q8IYJ1 553 aa12.41□□□□□ -0.42
USP11-206ENST00000469080 EBF4Q9BQW3 602 aa12.41□□□□□ -0.42
USP11-206ENST00000469080 ABCG8Q9H221 673 aa12.41□□□□□ -0.42
USP11-206ENST00000469080 GIMAP4Q9NUV9 329 aa12.41□□□□□ -0.42
USP11-206ENST00000469080 UCKL1Q9NWZ5 548 aa12.41□□□□□ -0.42
USP11-206ENST00000469080 MTMR10Q9NXD2 777 aa12.41□□□□□ -0.42
USP11-206ENST00000469080 KRBA1A5PL33 1030 aa12.41□□□□□ -0.42
USP11-206ENST00000469080 SEPT4O43236 478 aa12.41□□□□□ -0.42
USP11-206ENST00000469080 GJB3O75712 270 aa12.41□□□□□ -0.42
USP11-206ENST00000469080 UGT1A6P19224 532 aa12.41□□□□□ -0.42
USP11-206ENST00000469080 UGT1A1P22309 533 aa12.41□□□□□ -0.42
USP11-206ENST00000469080 UGT1A4P22310 534 aa12.41□□□□□ -0.42
USP11-206ENST00000469080 WEE1P30291 646 aa12.41□□□□□ -0.42
USP11-206ENST00000469080 UGT1A3P35503 534 aa12.41□□□□□ -0.42
USP11-206ENST00000469080 UGT1A5P35504 534 aa12.41□□□□□ -0.42
USP11-206ENST00000469080 PRAMEP78395 509 aa12.41□□□□□ -0.42
USP11-206ENST00000469080 HNRNPDQ14103 355 aaKnown RBP12.41□□□□□ -0.42
USP11-206ENST00000469080 MMAAQ8IVH4 418 aaKnown RBP12.41□□□□□ -0.42
USP11-206ENST00000469080 CRYBG2Q8N1P7 616 aa12.41□□□□□ -0.42
USP11-206ENST00000469080 GALNT6Q8NCL4 622 aa12.41□□□□□ -0.42
USP11-206ENST00000469080 TRPC4APQ8TEL6 797 aa12.41□□□□□ -0.42
USP11-206ENST00000469080 MED30Q96HR3 178 aa12.41□□□□□ -0.42
USP11-206ENST00000469080 NMUR1Q9HB89 426 aa12.41□□□□□ -0.42
USP11-206ENST00000469080 SLC2A6Q9UGQ3 507 aa12.41□□□□□ -0.42
USP11-206ENST00000469080 F5P12259 2224 aa12.41□□□□□ -0.42
USP11-206ENST00000469080 RLFQ13129 1914 aa12.41□□□□□ -0.42
USP11-206ENST00000469080 XIRP2A4UGR9 3374 aa12.41□□□□□ -0.42
USP11-206ENST00000469080 AXLP30530 894 aa12.41□□□□□ -0.42
USP11-206ENST00000469080 MPP1Q00013 466 aa12.41□□□□□ -0.42
USP11-206ENST00000469080 KCNJ11Q14654 390 aa12.41□□□□□ -0.42
USP11-206ENST00000469080 PERM1Q5SV97 790 aa12.41□□□□□ -0.42
USP11-206ENST00000469080 SLC41A1Q8IVJ1 513 aa12.41□□□□□ -0.42
USP11-206ENST00000469080 CLIP4Q8N3C7 705 aa12.41□□□□□ -0.42
USP11-206ENST00000469080 LINC01465Q8N7H1 131 aa12.41□□□□□ -0.42
USP11-206ENST00000469080 SLC44A1Q8WWI5 657 aa12.41□□□□□ -0.42
USP11-206ENST00000469080 PCDHB7Q9Y5E2 793 aa12.41□□□□□ -0.42
USP11-206ENST00000469080 TEX264Q9Y6I9 313 aa12.41□□□□□ -0.42
USP11-206ENST00000469080 CHADO15335 359 aa12.4□□□□□ -0.42
USP11-206ENST00000469080 PEX1O43933 1283 aa12.4□□□□□ -0.42
USP11-206ENST00000469080 CNTN5O94779 1100 aa12.4□□□□□ -0.42
USP11-206ENST00000469080 MYO1DO94832 1006 aa12.4□□□□□ -0.42
USP11-206ENST00000469080 FOSL1P15407 271 aa12.4□□□□□ -0.42
USP11-206ENST00000469080 SERPINB5P36952 375 aa12.4□□□□□ -0.42
USP11-206ENST00000469080 CASP2P42575 452 aa12.4□□□□□ -0.42
USP11-206ENST00000469080 PLIN5Q00G26 463 aa12.4□□□□□ -0.42
USP11-206ENST00000469080 TAF10Q12962 218 aa12.4□□□□□ -0.42
USP11-206ENST00000469080 CSHL1Q14406 222 aa12.4□□□□□ -0.42
USP11-206ENST00000469080 PDK4Q16654 411 aa12.4□□□□□ -0.42
USP11-206ENST00000469080 CEP78Q5JTW2 689 aa12.4□□□□□ -0.42
USP11-206ENST00000469080 ARHGAP17Q68EM7 881 aa12.4□□□□□ -0.42
USP11-206ENST00000469080 C10orf107Q8IVU9 208 aa12.4□□□□□ -0.42
USP11-206ENST00000469080 ULK2Q8IYT8 1036 aa12.4□□□□□ -0.42
USP11-206ENST00000469080 EFHD2Q96C19 240 aaPredicted RBP12.4□□□□□ -0.42
USP11-206ENST00000469080 APOPT1Q96IL0 206 aa12.4□□□□□ -0.42
USP11-206ENST00000469080 TMEM109Q9BVC6 243 aa12.4□□□□□ -0.42
USP11-206ENST00000469080 B3GNT4Q9C0J1 378 aa12.4□□□□□ -0.42
USP11-206ENST00000469080 NMUR2Q9GZQ4 415 aa12.4□□□□□ -0.42
USP11-206ENST00000469080 RNF208Q9H0X6 261 aa12.4□□□□□ -0.42
USP11-206ENST00000469080 GKN1Q9NS71 199 aa12.4□□□□□ -0.42
USP11-206ENST00000469080 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.4□□□□□ -0.42
USP11-206ENST00000469080 MTO1Q9Y2Z2 717 aaKnown RBP12.4□□□□□ -0.42
USP11-206ENST00000469080 A0A088AWK7 358 aa12.4□□□□□ -0.42
USP11-206ENST00000469080 NEMP2A6NFY4 417 aa12.4□□□□□ -0.42
USP11-206ENST00000469080 F8W8V4 182 aa12.4□□□□□ -0.42
USP11-206ENST00000469080 H3BUI4 141 aa12.4□□□□□ -0.42
USP11-206ENST00000469080 I6L893 689 aaPredicted RBP12.4□□□□□ -0.42
USP11-206ENST00000469080 GIPC1O14908 333 aa12.4□□□□□ -0.42
USP11-206ENST00000469080 CASQ2O14958 399 aaPredicted RBP12.4□□□□□ -0.42
USP11-206ENST00000469080 B4GALT3O60512 393 aa12.4□□□□□ -0.42
USP11-206ENST00000469080 ABCB1P08183 1280 aaPredicted RBP12.4□□□□□ -0.42
USP11-206ENST00000469080 JAK1P23458 1154 aa12.4□□□□□ -0.42
USP11-206ENST00000469080 CCR1P32246 355 aa12.4□□□□□ -0.42
USP11-206ENST00000469080 FDFT1P37268 417 aa12.4□□□□□ -0.42
USP11-206ENST00000469080 GARSP41250 739 aaKnown RBP12.4□□□□□ -0.42
USP11-206ENST00000469080 CD86P42081 329 aa12.4□□□□□ -0.42
USP11-206ENST00000469080 GABRB2P47870 512 aa12.4□□□□□ -0.42
USP11-206ENST00000469080 CAP1Q01518 475 aa12.4□□□□□ -0.42
USP11-206ENST00000469080 ZBTB6Q15916 424 aa12.4□□□□□ -0.42
USP11-206ENST00000469080 DPYSL2Q16555 572 aa12.4□□□□□ -0.42
USP11-206ENST00000469080 ZNF470Q6ECI4 717 aa12.4□□□□□ -0.42
USP11-206ENST00000469080 ESRP1Q6NXG1 681 aaKnown RBP12.4□□□□□ -0.42
USP11-206ENST00000469080 NET1Q7Z628 596 aaPredicted RBP12.4□□□□□ -0.42
USP11-206ENST00000469080 KCNMB4Q86W47 210 aa12.4□□□□□ -0.42
USP11-206ENST00000469080 SMIM14Q96QK8 99 aa12.4□□□□□ -0.42
USP11-206ENST00000469080 ADAMTS6Q9UKP5 1117 aa12.4□□□□□ -0.42
USP11-206ENST00000469080 RUVBL2Q9Y230 463 aaKnown RBP12.4□□□□□ -0.42
USP11-206ENST00000469080 A0A096LPK6 155 aa12.39□□□□□ -0.43
USP11-206ENST00000469080 SNTNA6NMZ2 147 aa12.39□□□□□ -0.43
USP11-206ENST00000469080 CBX4O00257 560 aa12.39□□□□□ -0.43
USP11-206ENST00000469080 FCHO1O14526 889 aa12.39□□□□□ -0.43
USP11-206ENST00000469080 PTPN3P26045 913 aa12.39□□□□□ -0.43
USP11-206ENST00000469080 ACLYP53396 1101 aa12.39□□□□□ -0.43
USP11-206ENST00000469080 ACTR3P61158 418 aa12.39□□□□□ -0.43
USP11-206ENST00000469080 TUSC3Q13454 348 aa12.39□□□□□ -0.43
USP11-206ENST00000469080 ZNF829Q3KNS6 432 aaPredicted RBP12.39□□□□□ -0.43
USP11-206ENST00000469080 PLEKHG4Q58EX7 1191 aa12.39□□□□□ -0.43
USP11-206ENST00000469080 ADGRD1Q6QNK2 874 aa12.39□□□□□ -0.43
USP11-206ENST00000469080 ZNF467Q7Z7K2 595 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms