RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 SEMA3CQ99985 751 aa11.83□□□□□ -0.52
AC009404.1-202ENST00000439955 TBL1YQ9BQ87 522 aa11.83□□□□□ -0.52
AC009404.1-202ENST00000439955 FSD1LQ9BXM9 530 aa11.83□□□□□ -0.52
AC009404.1-202ENST00000439955 TPSD1Q9BZJ3 242 aa11.83□□□□□ -0.52
AC009404.1-202ENST00000439955 IL22Q9GZX6 179 aa11.83□□□□□ -0.52
AC009404.1-202ENST00000439955 EBF3Q9H4W6 596 aa11.83□□□□□ -0.52
AC009404.1-202ENST00000439955 DNAJC17Q9NVM6 304 aaKnown RBP11.83□□□□□ -0.52
AC009404.1-202ENST00000439955 GPSM3Q9Y4H4 160 aa11.83□□□□□ -0.52
AC009404.1-202ENST00000439955 LOC400499M0QZD8 3231 aa11.83□□□□□ -0.52
AC009404.1-202ENST00000439955 LOC285095A0A1B0GVY8 99 aa11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 MAGEB16A2A368 324 aa11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 OTOL1A6NHN0 477 aaPredicted RBP11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 F5H423 210 aaPredicted RBP11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 INSIG1O15503 277 aa11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 TIMM44O43615 452 aa11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 TULP3O75386 442 aa11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 GSRP00390 522 aa11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 CPP00450 1065 aa11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 SRPRAP08240 638 aaKnown RBP11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 PYGBP11216 843 aa11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 POLR2EP19388 210 aaKnown RBP11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 HLA-DPA1P20036 260 aa11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 CA4P22748 312 aa11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 PHBP35232 272 aa11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 GRIA1P42261 906 aa11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 DGKEP52429 567 aa11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 WNT3AP56704 352 aa11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 RHOAP61586 193 aa11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 ECT2LQ008S8 904 aa11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 FASTKD3Q14CZ7 662 aaKnown RBP11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 KYNUQ16719 465 aa11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 SYCP2LQ5T4T6 812 aa11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 MBLAC2Q68D91 279 aa11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 GRAMD4Q6IC98 578 aa11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 LINGO4Q6UY18 593 aa11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 PROSER1Q86XN7 944 aa11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 PLPP6Q8IY26 295 aa11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 CHCHD4Q8N4Q1 142 aa11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 SH2D3CQ8N5H7 860 aa11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 CAMKK1Q8N5S9 505 aa11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 PCDH20Q8N6Y1 951 aaKnown RBP11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 KDM1BQ8NB78 822 aa11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 FBXO36Q8NEA4 188 aa11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 OR52K1Q8NGK4 314 aa11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 PTCD2Q8WV60 388 aaKnown RBP11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 STAMBPL1Q96FJ0 436 aa11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 C9orf72Q96LT7 481 aa11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 BBC3Q96PG8 261 aaPredicted RBP11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 RUFY1Q96T51 708 aa11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 EBNA1BP2Q99848 306 aaKnown RBP11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 WDR83Q9BRX9 315 aaKnown RBP11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 FICDQ9BVA6 458 aa11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 TMEM109Q9BVC6 243 aa11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 PPCSQ9HAB8 311 aa11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 SCUBE2Q9NQ36 999 aa11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 UBP1Q9NZI7 540 aa11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 BFARQ9NZS9 450 aa11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 DEC1Q9P2X7 70 aa11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 PLAAQ9Y263 795 aa11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 MYOFQ9NZM1 2061 aa11.82□□□□□ -0.52
AC009404.1-202ENST00000439955 SMG1Q96Q15 3661 aaKnown RBP11.81□□□□□ -0.52
AC009404.1-202ENST00000439955 FREM2Q5SZK8 3169 aa11.81□□□□□ -0.52
AC009404.1-202ENST00000439955 A0A087WUV0 522 aaPredicted RBP11.81□□□□□ -0.52
AC009404.1-202ENST00000439955 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.81□□□□□ -0.52
AC009404.1-202ENST00000439955 ATP9BO43861 1147 aa11.81□□□□□ -0.52
AC009404.1-202ENST00000439955 AVILO75366 819 aa11.81□□□□□ -0.52
AC009404.1-202ENST00000439955 PMPCBO75439 489 aa11.81□□□□□ -0.52
AC009404.1-202ENST00000439955 ACSL3O95573 720 aa11.81□□□□□ -0.52
AC009404.1-202ENST00000439955 IGSF6O95976 241 aa11.81□□□□□ -0.52
AC009404.1-202ENST00000439955 MT-CO1P00395 513 aa11.81□□□□□ -0.52
AC009404.1-202ENST00000439955 FGF1P05230 155 aa11.81□□□□□ -0.52
AC009404.1-202ENST00000439955 ATP5BP06576 529 aaKnown RBP11.81□□□□□ -0.52
AC009404.1-202ENST00000439955 SRCP12931 536 aa11.81□□□□□ -0.52
AC009404.1-202ENST00000439955 PGAM1P18669 254 aa11.81□□□□□ -0.52
AC009404.1-202ENST00000439955 BCKDHBP21953 392 aa11.81□□□□□ -0.52
AC009404.1-202ENST00000439955 ELK3P41970 407 aa11.81□□□□□ -0.52
AC009404.1-202ENST00000439955 RGRP47804 291 aa11.81□□□□□ -0.52
AC009404.1-202ENST00000439955 SNRPD1P62314 119 aaKnown RBP11.81□□□□□ -0.52
AC009404.1-202ENST00000439955 CDK18Q07002 472 aa11.81□□□□□ -0.52
AC009404.1-202ENST00000439955 GPS2Q13227 327 aa11.81□□□□□ -0.52
AC009404.1-202ENST00000439955 FRG1Q14331 258 aaKnown RBP11.81□□□□□ -0.52
AC009404.1-202ENST00000439955 SPARCL1Q14515 664 aa11.81□□□□□ -0.52
AC009404.1-202ENST00000439955 SLC29A2Q14542 456 aa11.81□□□□□ -0.52
AC009404.1-202ENST00000439955 STAT4Q14765 748 aa11.81□□□□□ -0.52
AC009404.1-202ENST00000439955 E2F5Q15329 346 aa11.81□□□□□ -0.52
AC009404.1-202ENST00000439955 STEAP4Q687X5 459 aa11.81□□□□□ -0.52
AC009404.1-202ENST00000439955 DENND5AQ6IQ26 1287 aa11.81□□□□□ -0.52
AC009404.1-202ENST00000439955 C22orf39Q6P5X5 142 aa11.81□□□□□ -0.52
AC009404.1-202ENST00000439955 ZNF449Q6P9G9 518 aa11.81□□□□□ -0.52
AC009404.1-202ENST00000439955 NCEH1Q6PIU2 408 aa11.81□□□□□ -0.52
AC009404.1-202ENST00000439955 CYS1Q717R9 158 aa11.81□□□□□ -0.52
AC009404.1-202ENST00000439955 CYP2U1Q7Z449 544 aa11.81□□□□□ -0.52
AC009404.1-202ENST00000439955 PALM2Q8IXS6 379 aa11.81□□□□□ -0.52
AC009404.1-202ENST00000439955 CNPY4Q8N129 248 aa11.81□□□□□ -0.52
AC009404.1-202ENST00000439955 AGGF1Q8N302 714 aaeCLIP11.81□□□□□ -0.52
AC009404.1-202ENST00000439955 NAT16Q8N8M0 369 aa11.81□□□□□ -0.52
AC009404.1-202ENST00000439955 DNAAF3Q8N9W5 541 aa11.81□□□□□ -0.52
AC009404.1-202ENST00000439955 RPLP0P6Q8NHW5 317 aa11.81□□□□□ -0.52
AC009404.1-202ENST00000439955 PIGKQ92643 395 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms