RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 SLC7A8Q9UHI5 535 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 ZDHHC2Q9UIJ5 367 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 RIMKLBQ9ULI2 386 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 VWA7Q9Y334 891 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 KCTD3Q9Y597 815 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 PLXNA4Q9HCM2 1894 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 A0A088AWK7 358 aa10.47□□□□□ -0.73
CPNE1-218ENST00000439806 LOC100653049A0A140TA62 436 aa10.47□□□□□ -0.73
CPNE1-218ENST00000439806 CCDC162PA2VCL2 907 aa10.47□□□□□ -0.73
CPNE1-218ENST00000439806 A8MT66 165 aa10.47□□□□□ -0.73
CPNE1-218ENST00000439806 MUSKO15146 869 aa10.47□□□□□ -0.73
CPNE1-218ENST00000439806 CD3EAPO15446 510 aaKnown RBP10.47□□□□□ -0.73
CPNE1-218ENST00000439806 ADAM12O43184 909 aa10.47□□□□□ -0.73
CPNE1-218ENST00000439806 MAP3K7O43318 606 aa10.47□□□□□ -0.73
CPNE1-218ENST00000439806 COCHO43405 550 aa10.47□□□□□ -0.73
CPNE1-218ENST00000439806 KDELR3O43731 214 aa10.47□□□□□ -0.73
CPNE1-218ENST00000439806 CCNT2O60583 730 aaKnown RBP10.47□□□□□ -0.73
CPNE1-218ENST00000439806 SMIM24O75264 130 aa10.47□□□□□ -0.73
CPNE1-218ENST00000439806 CLDN11O75508 207 aa10.47□□□□□ -0.73
CPNE1-218ENST00000439806 KRT34O76011 436 aa10.47□□□□□ -0.73
CPNE1-218ENST00000439806 PARNO95453 639 aaKnown RBP10.47□□□□□ -0.73
CPNE1-218ENST00000439806 CRTAMO95727 393 aa10.47□□□□□ -0.73
CPNE1-218ENST00000439806 S1PR4O95977 384 aa10.47□□□□□ -0.73
CPNE1-218ENST00000439806 IRF1P10914 325 aa10.47□□□□□ -0.73
CPNE1-218ENST00000439806 TFEBP19484 476 aa10.47□□□□□ -0.73
CPNE1-218ENST00000439806 ITGAXP20702 1163 aa10.47□□□□□ -0.73
CPNE1-218ENST00000439806 HOXD9P28356 352 aaPredicted RBP10.47□□□□□ -0.73
CPNE1-218ENST00000439806 ADSLP30566 484 aaPredicted RBP10.47□□□□□ -0.73
CPNE1-218ENST00000439806 PPARGP37231 505 aaPredicted RBP10.47□□□□□ -0.73
CPNE1-218ENST00000439806 NUMBP49757 651 aa10.47□□□□□ -0.73
CPNE1-218ENST00000439806 CCL23P55773 120 aa10.47□□□□□ -0.73
CPNE1-218ENST00000439806 ACTR3P61158 418 aa10.47□□□□□ -0.73
CPNE1-218ENST00000439806 ACVR1Q04771 509 aa10.47□□□□□ -0.73
CPNE1-218ENST00000439806 TBL3Q12788 808 aaKnown RBP10.47□□□□□ -0.73
CPNE1-218ENST00000439806 PLD1Q13393 1074 aa10.47□□□□□ -0.73
CPNE1-218ENST00000439806 BTG3Q14201 252 aaPredicted RBP10.47□□□□□ -0.73
CPNE1-218ENST00000439806 IHHQ14623 411 aa10.47□□□□□ -0.73
CPNE1-218ENST00000439806 RFTN1Q14699 578 aaPredicted RBP10.47□□□□□ -0.73
CPNE1-218ENST00000439806 ACAP2Q15057 778 aa10.47□□□□□ -0.73
CPNE1-218ENST00000439806 CMPK2Q5EBM0 449 aa10.47□□□□□ -0.73
CPNE1-218ENST00000439806 SH2D4BQ5SQS7 431 aa10.47□□□□□ -0.73
CPNE1-218ENST00000439806 SLC8B1Q6J4K2 584 aa10.47□□□□□ -0.73
CPNE1-218ENST00000439806 AAGABQ6PD74 315 aa10.47□□□□□ -0.73
CPNE1-218ENST00000439806 CHST9Q7L1S5 443 aa10.47□□□□□ -0.73
CPNE1-218ENST00000439806 RAB44Q7Z6P3 723 aaPredicted RBP10.47□□□□□ -0.73
CPNE1-218ENST00000439806 DEFB128Q7Z7B8 93 aa10.47□□□□□ -0.73
CPNE1-218ENST00000439806 SDCCAG8Q86SQ7 713 aaPredicted RBP10.47□□□□□ -0.73
CPNE1-218ENST00000439806 LDB1Q86U70 411 aaPredicted RBP10.47□□□□□ -0.73
CPNE1-218ENST00000439806 SNX32Q86XE0 403 aa10.47□□□□□ -0.73
CPNE1-218ENST00000439806 MYLK4Q86YV6 388 aaPredicted RBP10.47□□□□□ -0.73
CPNE1-218ENST00000439806 DEFB107AQ8IZN7 70 aa10.47□□□□□ -0.73
CPNE1-218ENST00000439806 BRSK1Q8TDC3 778 aa10.47□□□□□ -0.73
CPNE1-218ENST00000439806 ACTRT2Q8TDY3 377 aa10.47□□□□□ -0.73
CPNE1-218ENST00000439806 JADE3Q92613 823 aa10.47□□□□□ -0.73
CPNE1-218ENST00000439806 RMDN1Q96DB5 314 aa10.47□□□□□ -0.73
CPNE1-218ENST00000439806 MOCOSQ96EN8 888 aa10.47□□□□□ -0.73
CPNE1-218ENST00000439806 CATSPER2Q96P56 530 aa10.47□□□□□ -0.73
CPNE1-218ENST00000439806 LBHD1Q9BQE6 289 aaPredicted RBP10.47□□□□□ -0.73
CPNE1-218ENST00000439806 MGME1Q9BQP7 344 aa10.47□□□□□ -0.73
CPNE1-218ENST00000439806 PPP1R12CQ9BZL4 782 aa10.47□□□□□ -0.73
CPNE1-218ENST00000439806 UNC93B1Q9H1C4 597 aa10.47□□□□□ -0.73
CPNE1-218ENST00000439806 HIPK3Q9H422 1215 aa10.47□□□□□ -0.73
CPNE1-218ENST00000439806 NDE1Q9NXR1 346 aa10.47□□□□□ -0.73
CPNE1-218ENST00000439806 MARCH4Q9P2E8 410 aaPredicted RBP10.47□□□□□ -0.73
CPNE1-218ENST00000439806 AFF4Q9UHB7 1163 aaKnown RBP10.47□□□□□ -0.73
CPNE1-218ENST00000439806 SSX2IPQ9Y2D8 614 aa10.47□□□□□ -0.73
CPNE1-218ENST00000439806 LRRC42Q9Y546 428 aa10.47□□□□□ -0.73
CPNE1-218ENST00000439806 ARL5AQ9Y689 179 aa10.47□□□□□ -0.73
CPNE1-218ENST00000439806 OBSL1O75147 1896 aa10.47□□□□□ -0.73
CPNE1-218ENST00000439806 A0A0D9SEW6 157 aa10.46□□□□□ -0.73
CPNE1-218ENST00000439806 ILVBLA1L0T0 632 aa10.46□□□□□ -0.73
CPNE1-218ENST00000439806 RGSL1A5PLK6 1076 aa10.46□□□□□ -0.73
CPNE1-218ENST00000439806 ZNF840PA6NDX5 716 aa10.46□□□□□ -0.73
CPNE1-218ENST00000439806 NEMP2A6NFY4 417 aa10.46□□□□□ -0.73
CPNE1-218ENST00000439806 INSIG1O15503 277 aa10.46□□□□□ -0.73
CPNE1-218ENST00000439806 BUD23O43709 281 aaKnown RBP10.46□□□□□ -0.73
CPNE1-218ENST00000439806 TSPAN3O60637 253 aa10.46□□□□□ -0.73
CPNE1-218ENST00000439806 TBX10O75333 385 aa10.46□□□□□ -0.73
CPNE1-218ENST00000439806 GJB3O75712 270 aa10.46□□□□□ -0.73
CPNE1-218ENST00000439806 ZMPSTE24O75844 475 aa10.46□□□□□ -0.73
CPNE1-218ENST00000439806 STC2O76061 302 aa10.46□□□□□ -0.73
CPNE1-218ENST00000439806 PDE5AO76074 875 aa10.46□□□□□ -0.73
CPNE1-218ENST00000439806 IPO13O94829 963 aaKnown RBP10.46□□□□□ -0.73
CPNE1-218ENST00000439806 BAG2O95816 211 aa10.46□□□□□ -0.73
CPNE1-218ENST00000439806 CXCL10P02778 98 aa10.46□□□□□ -0.73
CPNE1-218ENST00000439806 ANPEPP15144 967 aa10.46□□□□□ -0.73
CPNE1-218ENST00000439806 ACADSP16219 412 aa10.46□□□□□ -0.73
CPNE1-218ENST00000439806 ATP6V1C1P21283 382 aa10.46□□□□□ -0.73
CPNE1-218ENST00000439806 FDXRP22570 491 aa10.46□□□□□ -0.73
CPNE1-218ENST00000439806 CES1P23141 567 aa10.46□□□□□ -0.73
CPNE1-218ENST00000439806 EPHA3P29320 983 aa10.46□□□□□ -0.73
CPNE1-218ENST00000439806 PMLP29590 882 aa10.46□□□□□ -0.73
CPNE1-218ENST00000439806 CORO1AP31146 461 aaKnown RBP10.46□□□□□ -0.73
CPNE1-218ENST00000439806 SLC26A3P40879 764 aa10.46□□□□□ -0.73
CPNE1-218ENST00000439806 ALDH1A3P47895 512 aa10.46□□□□□ -0.73
CPNE1-218ENST00000439806 CDKN2DP55273 166 aa10.46□□□□□ -0.73
CPNE1-218ENST00000439806 RPS24P62847 133 aaKnown RBP10.46□□□□□ -0.73
CPNE1-218ENST00000439806 SATB1Q01826 763 aa10.46□□□□□ -0.73
CPNE1-218ENST00000439806 NSUN2Q08J23 767 aaKnown RBP eCLIP10.46□□□□□ -0.73
CPNE1-218ENST00000439806 CYLC2Q14093 348 aaPredicted RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms