RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 MAFFQ9ULX9 164 aa11.59□□□□□ -0.55
PTCH1-208ENST00000430669 EDF1O60869 148 aaKnown RBP11.59□□□□□ -0.55
PTCH1-208ENST00000430669 SEC22BO75396 215 aa11.59□□□□□ -0.55
PTCH1-208ENST00000430669 PBLDP30039 288 aaPredicted RBP11.59□□□□□ -0.55
PTCH1-208ENST00000430669 ADSLP30566 484 aaPredicted RBP11.59□□□□□ -0.55
PTCH1-208ENST00000430669 CCL23P55773 120 aa11.59□□□□□ -0.55
PTCH1-208ENST00000430669 SLC9A4Q6AI14 798 aa11.59□□□□□ -0.55
PTCH1-208ENST00000430669 GDF6Q6KF10 455 aaPredicted RBP11.59□□□□□ -0.55
PTCH1-208ENST00000430669 PCDH19Q8TAB3 1148 aa11.59□□□□□ -0.55
PTCH1-208ENST00000430669 NSMCE2Q96MF7 247 aa11.59□□□□□ -0.55
PTCH1-208ENST00000430669 ZDHHC18Q9NUE0 388 aa11.59□□□□□ -0.55
PTCH1-208ENST00000430669 PHGDHO43175 533 aaKnown RBP11.59□□□□□ -0.55
PTCH1-208ENST00000430669 ANXA6P08133 673 aa11.59□□□□□ -0.55
PTCH1-208ENST00000430669 GPR15P49685 360 aa11.59□□□□□ -0.55
PTCH1-208ENST00000430669 BRSK1Q8TDC3 778 aa11.59□□□□□ -0.55
PTCH1-208ENST00000430669 MRPL48Q96GC5 212 aaKnown RBP11.59□□□□□ -0.55
PTCH1-208ENST00000430669 ZNF184Q99676 751 aaPredicted RBP11.59□□□□□ -0.55
PTCH1-208ENST00000430669 OMDQ99983 421 aa11.59□□□□□ -0.55
PTCH1-208ENST00000430669 BBS2Q9BXC9 721 aa11.59□□□□□ -0.55
PTCH1-208ENST00000430669 RNF19AQ9NV58 838 aa11.59□□□□□ -0.55
PTCH1-208ENST00000430669 MYBPHLA2RUH7 354 aa11.58□□□□□ -0.55
PTCH1-208ENST00000430669 BST1Q10588 318 aa11.58□□□□□ -0.55
PTCH1-208ENST00000430669 EPS8Q12929 822 aa11.58□□□□□ -0.55
PTCH1-208ENST00000430669 CYP2A13Q16696 494 aa11.58□□□□□ -0.55
PTCH1-208ENST00000430669 FAM136AQ96C01 138 aa11.58□□□□□ -0.55
PTCH1-208ENST00000430669 PLEKHA8Q96JA3 519 aa11.58□□□□□ -0.55
PTCH1-208ENST00000430669 INSIG1O15503 277 aa11.58□□□□□ -0.56
PTCH1-208ENST00000430669 CCT8P50990 548 aa11.58□□□□□ -0.56
PTCH1-208ENST00000430669 ACSL4O60488 711 aa11.58□□□□□ -0.56
PTCH1-208ENST00000430669 RECQL5O94762 991 aaPredicted RBP11.58□□□□□ -0.56
PTCH1-208ENST00000430669 TNFAIP8O95379 198 aa11.58□□□□□ -0.56
PTCH1-208ENST00000430669 METTL21CQ5VZV1 264 aa11.58□□□□□ -0.56
PTCH1-208ENST00000430669 CNKSR3Q6P9H4 555 aa11.58□□□□□ -0.56
PTCH1-208ENST00000430669 ZNF655Q8N720 491 aaPredicted RBP11.58□□□□□ -0.56
PTCH1-208ENST00000430669 SLC35B2Q8TB61 432 aa11.58□□□□□ -0.56
PTCH1-208ENST00000430669 FAM120BQ96EK7 910 aaKnown RBP11.58□□□□□ -0.56
PTCH1-208ENST00000430669 TMEM237Q96Q45 408 aa11.58□□□□□ -0.56
PTCH1-208ENST00000430669 H2AFY2Q9P0M6 372 aaPredicted RBP11.58□□□□□ -0.56
PTCH1-208ENST00000430669 SLC38A8A6NNN8 435 aa11.58□□□□□ -0.56
PTCH1-208ENST00000430669 MSI1O43347 362 aaKnown RBP11.58□□□□□ -0.56
PTCH1-208ENST00000430669 ZNF23P17027 643 aa11.58□□□□□ -0.56
PTCH1-208ENST00000430669 NAGLUP54802 743 aa11.58□□□□□ -0.56
PTCH1-208ENST00000430669 TAF1AQ15573 450 aaPredicted RBP11.58□□□□□ -0.56
PTCH1-208ENST00000430669 RNPEPL1Q9HAU8 725 aa11.58□□□□□ -0.56
PTCH1-208ENST00000430669 DTLQ9NZJ0 730 aa11.58□□□□□ -0.56
PTCH1-208ENST00000430669 LEF1Q9UJU2 399 aaPredicted RBP11.58□□□□□ -0.56
PTCH1-208ENST00000430669 NUDT5Q9UKK9 219 aa11.58□□□□□ -0.56
PTCH1-208ENST00000430669 F8W810 466 aa11.58□□□□□ -0.56
PTCH1-208ENST00000430669 ZSCAN9O15535 394 aaPredicted RBP11.58□□□□□ -0.56
PTCH1-208ENST00000430669 ZCCHC8Q6NZY4 707 aaKnown RBP11.58□□□□□ -0.56
PTCH1-208ENST00000430669 ZCCHC23Q6ZST2 131 aa11.58□□□□□ -0.56
PTCH1-208ENST00000430669 R3HCC1LQ7Z5L2 792 aaKnown RBP11.58□□□□□ -0.56
PTCH1-208ENST00000430669 SYTL1Q8IYJ3 562 aa11.58□□□□□ -0.56
PTCH1-208ENST00000430669 FUKQ8N0W3 1084 aa11.58□□□□□ -0.56
PTCH1-208ENST00000430669 TBC1D3BA6NDS4 549 aa11.58□□□□□ -0.56
PTCH1-208ENST00000430669 KPNA3O00505 521 aaPredicted RBP11.58□□□□□ -0.56
PTCH1-208ENST00000430669 S100A5P33763 92 aa11.58□□□□□ -0.56
PTCH1-208ENST00000430669 ZNF549Q6P9A3 640 aa11.58□□□□□ -0.56
PTCH1-208ENST00000430669 P3H2Q8IVL5 708 aa11.58□□□□□ -0.56
PTCH1-208ENST00000430669 CLYBLQ8N0X4 340 aa11.58□□□□□ -0.56
PTCH1-208ENST00000430669 LRRC15Q8TF66 581 aa11.58□□□□□ -0.56
PTCH1-208ENST00000430669 CEP295NLQ96MC4 621 aa11.58□□□□□ -0.56
PTCH1-208ENST00000430669 SNX13Q9Y5W8 968 aa11.58□□□□□ -0.56
PTCH1-208ENST00000430669 DNAJC25-GNG10A0A024R161 153 aa11.58□□□□□ -0.56
PTCH1-208ENST00000430669 ABHD14A-ACY1A0A1B0GW23 586 aa11.58□□□□□ -0.56
PTCH1-208ENST00000430669 PIRO00625 290 aa11.58□□□□□ -0.56
PTCH1-208ENST00000430669 GABRR2P28476 465 aa11.58□□□□□ -0.56
PTCH1-208ENST00000430669 MC4RP32245 332 aa11.58□□□□□ -0.56
PTCH1-208ENST00000430669 GPC1P35052 558 aa11.58□□□□□ -0.56
PTCH1-208ENST00000430669 PLD3Q8IV08 490 aa11.58□□□□□ -0.56
PTCH1-208ENST00000430669 PTCD3Q96EY7 689 aaKnown RBP11.58□□□□□ -0.56
PTCH1-208ENST00000430669 MAGED4Q96JG8 741 aa11.58□□□□□ -0.56
PTCH1-208ENST00000430669 FAM192AQ9GZU8 254 aa11.58□□□□□ -0.56
PTCH1-208ENST00000430669 RPS6KA6Q9UK32 745 aa11.58□□□□□ -0.56
PTCH1-208ENST00000430669 CDV3Q9UKY7 258 aaKnown RBP11.58□□□□□ -0.56
PTCH1-208ENST00000430669 PADI4Q9UM07 663 aa11.58□□□□□ -0.56
PTCH1-208ENST00000430669 BANF1O75531 89 aa11.57□□□□□ -0.56
PTCH1-208ENST00000430669 FBXW4P57775 412 aa11.57□□□□□ -0.56
PTCH1-208ENST00000430669 ELMO1Q92556 727 aa11.57□□□□□ -0.56
PTCH1-208ENST00000430669 STRA6Q9BX79 667 aa11.57□□□□□ -0.56
PTCH1-208ENST00000430669 CNTN6Q9UQ52 1028 aa11.57□□□□□ -0.56
PTCH1-208ENST00000430669 DNM1LO00429 736 aa11.57□□□□□ -0.56
PTCH1-208ENST00000430669 ELFN1P0C7U0 828 aa11.57□□□□□ -0.56
PTCH1-208ENST00000430669 PRKCQQ04759 706 aa11.57□□□□□ -0.56
PTCH1-208ENST00000430669 ELP6Q0PNE2 266 aa11.57□□□□□ -0.56
PTCH1-208ENST00000430669 PLCL1Q15111 1095 aa11.57□□□□□ -0.56
PTCH1-208ENST00000430669 C15orf39Q6ZRI6 1047 aa11.57□□□□□ -0.56
PTCH1-208ENST00000430669 LPCAT2Q7L5N7 544 aa11.57□□□□□ -0.56
PTCH1-208ENST00000430669 CD48P09326 243 aa11.57□□□□□ -0.56
PTCH1-208ENST00000430669 PROZP22891 400 aa11.57□□□□□ -0.56
PTCH1-208ENST00000430669 GALNT3Q14435 633 aa11.57□□□□□ -0.56
PTCH1-208ENST00000430669 LDLRAD1Q5T700 205 aa11.57□□□□□ -0.56
PTCH1-208ENST00000430669 PCYT2Q99447 389 aa11.57□□□□□ -0.56
PTCH1-208ENST00000430669 CCNDBP1O95273 360 aa11.57□□□□□ -0.56
PTCH1-208ENST00000430669 HGFP14210 728 aa11.57□□□□□ -0.56
PTCH1-208ENST00000430669 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.57□□□□□ -0.56
PTCH1-208ENST00000430669 FSTL1Q12841 308 aa11.57□□□□□ -0.56
PTCH1-208ENST00000430669 PROSER1Q86XN7 944 aa11.57□□□□□ -0.56
PTCH1-208ENST00000430669 ADHFE1Q8IWW8 467 aa11.57□□□□□ -0.56
PTCH1-208ENST00000430669 KRT78Q8N1N4 520 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms