RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 FFAR3O14843 346 aa13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 GPR42O15529 346 aa13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 SNAP91O60641 907 aa13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 ITGB1P05556 798 aa13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 GRIA1P42261 906 aa13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 GRIA4P48058 902 aa13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 RTP2Q5QGT7 225 aa13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 SCIMPQ6UWF3 145 aa13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 SMG9Q9H0W8 520 aaKnown RBP13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 GRHL1Q9NZI5 618 aa13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 SLC17A7Q9P2U7 560 aa13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 SPACA6W5XKT8 324 aa13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 GLYATL1P3A0A0U1RQE8 302 aa13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 POP4O95707 220 aaKnown RBP13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 NMBRP28336 390 aa13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 ACVRL1P37023 503 aa13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 AFF1P51825 1210 aaKnown RBP13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 ZNF132P52740 706 aa13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 HPCAP84074 193 aa13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 SKOR1P84550 965 aa13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 AASDHQ4L235 1098 aaPredicted RBP13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 ZNF366Q8N895 744 aa13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 SLC22A17Q8WUG5 538 aa13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 CD84Q9UIB8 345 aa13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 TNPO3Q9Y5L0 923 aaKnown RBP13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 HNRNPLP14866 589 aaKnown RBP eCLIP13.16□□□□□ -0.32e-7■■■■■ 50.1
PTPRN2-202ENST00000389416 CXCR3P49682 368 aa13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 RPL14P50914 215 aaKnown RBP13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 SEC13P55735 322 aa13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 MPP1Q00013 466 aa13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 CCDC85BQ15834 202 aaPredicted RBP13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 UBXN11Q5T124 520 aa13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 CLEC4FQ8N1N0 589 aa13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 RNF148Q8N7C7 305 aa13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 SKA1Q96BD8 255 aa13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 C12orf65Q9H3J6 166 aaKnown RBP13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 ARIH1Q9Y4X5 557 aaPredicted RBP13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 WNT6Q9Y6F9 365 aa13.16□□□□□ -0.3
PTPRN2-202ENST00000389416 FAM237BA0A1B0GVD1 139 aa13.15□□□□□ -0.3
PTPRN2-202ENST00000389416 USP1O94782 785 aa13.15□□□□□ -0.3
PTPRN2-202ENST00000389416 SEC24DO94855 1032 aaPredicted RBP13.15□□□□□ -0.3
PTPRN2-202ENST00000389416 CALB2P22676 271 aa13.15□□□□□ -0.3
PTPRN2-202ENST00000389416 TRMT10BQ6PF06 316 aaKnown RBP13.15□□□□□ -0.3
PTPRN2-202ENST00000389416 GALNT4Q8N4A0 578 aa13.15□□□□□ -0.3
PTPRN2-202ENST00000389416 GLIS1Q8NBF1 620 aa13.15□□□□□ -0.3
PTPRN2-202ENST00000389416 OR14C36Q8NHC7 312 aa13.15□□□□□ -0.3
PTPRN2-202ENST00000389416 SELENOMQ8WWX9 145 aa13.15□□□□□ -0.3
PTPRN2-202ENST00000389416 OXNAD1Q96HP4 312 aaPredicted RBP13.15□□□□□ -0.3
PTPRN2-202ENST00000389416 KLHL32Q96NJ5 620 aa13.15□□□□□ -0.3
PTPRN2-202ENST00000389416 PEBP4Q96S96 227 aa13.15□□□□□ -0.3
PTPRN2-202ENST00000389416 HPS4Q9NQG7 708 aa13.15□□□□□ -0.3
PTPRN2-202ENST00000389416 TDP1Q9NUW8 608 aa13.15□□□□□ -0.3
PTPRN2-202ENST00000389416 VTI1BQ9UEU0 232 aa13.15□□□□□ -0.3
PTPRN2-202ENST00000389416 TAGLN3Q9UI15 199 aa13.15□□□□□ -0.3
PTPRN2-202ENST00000389416 CYTH4Q9UIA0 394 aa13.15□□□□□ -0.3
PTPRN2-202ENST00000389416 ATP6AP2A0A1C7CYW4 349 aa13.15□□□□□ -0.3
PTPRN2-202ENST00000389416 J3KR12 359 aa13.15□□□□□ -0.3
PTPRN2-202ENST00000389416 ATP6AP2O75787 350 aa13.15□□□□□ -0.3
PTPRN2-202ENST00000389416 PKMP14618 531 aaKnown RBP13.15□□□□□ -0.3
PTPRN2-202ENST00000389416 HTR1BP28222 390 aa13.15□□□□□ -0.3
PTPRN2-202ENST00000389416 AP1S1P61966 158 aa13.15□□□□□ -0.3
PTPRN2-202ENST00000389416 MSLNQ13421 630 aaPredicted RBP13.15□□□□□ -0.3
PTPRN2-202ENST00000389416 GRM3Q14832 879 aa13.15□□□□□ -0.3
PTPRN2-202ENST00000389416 CYP1B1Q16678 543 aa13.15□□□□□ -0.3
PTPRN2-202ENST00000389416 C2orf27AQ580R0 203 aa13.15□□□□□ -0.3
PTPRN2-202ENST00000389416 CAMK1DQ8IU85 385 aa13.15□□□□□ -0.3
PTPRN2-202ENST00000389416 ACAT2Q9BWD1 397 aa13.15□□□□□ -0.3
PTPRN2-202ENST00000389416 ASF1AQ9Y294 204 aa13.15□□□□□ -0.3
PTPRN2-202ENST00000389416 TCAF1Q9Y4C2 921 aa13.15□□□□□ -0.3
PTPRN2-202ENST00000389416 MARF1Q9Y4F3 1742 aaKnown RBP13.15□□□□□ -0.3
PTPRN2-202ENST00000389416 F8W810 466 aa13.15□□□□□ -0.3
PTPRN2-202ENST00000389416 FTH1P02794 183 aa13.15□□□□□ -0.3
PTPRN2-202ENST00000389416 PRNPP04156 253 aa13.15□□□□□ -0.3
PTPRN2-202ENST00000389416 CDH5P33151 784 aaPredicted RBP13.15□□□□□ -0.3
PTPRN2-202ENST00000389416 SCTRP47872 440 aa13.15□□□□□ -0.3
PTPRN2-202ENST00000389416 ACSM2AQ08AH3 577 aa13.15□□□□□ -0.3
PTPRN2-202ENST00000389416 CYP51A1Q16850 503 aa13.15□□□□□ -0.3
PTPRN2-202ENST00000389416 PPM1JQ5JR12 505 aa13.15□□□□□ -0.3
PTPRN2-202ENST00000389416 ACSM2BQ68CK6 577 aa13.15□□□□□ -0.3
PTPRN2-202ENST00000389416 MTSS1LQ765P7 747 aa13.15□□□□□ -0.3
PTPRN2-202ENST00000389416 FAM9CQ8IZT9 166 aa13.15□□□□□ -0.3
PTPRN2-202ENST00000389416 CDYL2Q8N8U2 506 aa13.15□□□□□ -0.3
PTPRN2-202ENST00000389416 OTULINQ96BN8 352 aa13.15□□□□□ -0.3
PTPRN2-202ENST00000389416 MRPL57Q9BQC6 102 aaKnown RBP13.15□□□□□ -0.3
PTPRN2-202ENST00000389416 HEPHQ9BQS7 1158 aa13.15□□□□□ -0.3
PTPRN2-202ENST00000389416 ELAC1Q9H777 363 aaKnown RBP13.15□□□□□ -0.3
PTPRN2-202ENST00000389416 RXFP1Q9HBX9 757 aa13.15□□□□□ -0.3
PTPRN2-202ENST00000389416 MFHAS1Q9Y4C4 1052 aa13.15□□□□□ -0.3
PTPRN2-202ENST00000389416 ZBTB42B2RXF5 422 aa13.15□□□□□ -0.31
PTPRN2-202ENST00000389416 CNTN5O94779 1100 aa13.15□□□□□ -0.31
PTPRN2-202ENST00000389416 CBX6O95503 412 aa13.15□□□□□ -0.31
PTPRN2-202ENST00000389416 PABPC1P11940 636 aaKnown RBP13.15□□□□□ -0.31
PTPRN2-202ENST00000389416 MAGEA11P43364 429 aa13.15□□□□□ -0.31
PTPRN2-202ENST00000389416 BNC2Q6ZN30 1099 aaPredicted RBP13.15□□□□□ -0.31
PTPRN2-202ENST00000389416 GPRIN1Q7Z2K8 1008 aa13.15□□□□□ -0.31
PTPRN2-202ENST00000389416 ADAMTSL2Q86TH1 951 aa13.15□□□□□ -0.31
PTPRN2-202ENST00000389416 DEFB107AQ8IZN7 70 aa13.15□□□□□ -0.31
PTPRN2-202ENST00000389416 STYXQ8WUJ0 223 aa13.15□□□□□ -0.31
PTPRN2-202ENST00000389416 AP2M1Q96CW1 435 aa13.15□□□□□ -0.31
PTPRN2-202ENST00000389416 CNDP1Q96KN2 507 aa13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms