RNA–Protein interactions for RNA: ENST00000380821.7

SNAPC3-202, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 5,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-202ENST00000380821 LIN52Q52LA3 116 aa17.17■□□□□ 0.34
SNAPC3-202ENST00000380821 PTCHD4Q6ZW05 846 aa17.17■□□□□ 0.34
SNAPC3-202ENST00000380821 CCDC59Q9P031 241 aaKnown RBP17.17■□□□□ 0.34
SNAPC3-202ENST00000380821 AKAP7Q9P0M2 348 aaPredicted RBP17.17■□□□□ 0.34
SNAPC3-202ENST00000380821 FADS3Q9Y5Q0 445 aa17.17■□□□□ 0.34
SNAPC3-202ENST00000380821 HIST1H2ABP04908 130 aa17.17■□□□□ 0.34
SNAPC3-202ENST00000380821 BLMHQ13867 455 aa17.17■□□□□ 0.34
SNAPC3-202ENST00000380821 TRIM40Q6P9F5 258 aa17.17■□□□□ 0.34
SNAPC3-202ENST00000380821 C16orf59Q7L2K0 433 aa17.17■□□□□ 0.34
SNAPC3-202ENST00000380821 HIST3H2AQ7L7L0 130 aa17.17■□□□□ 0.34
SNAPC3-202ENST00000380821 TNS4Q8IZW8 715 aa17.17■□□□□ 0.34
SNAPC3-202ENST00000380821 CDYL2Q8N8U2 506 aa17.17■□□□□ 0.34
SNAPC3-202ENST00000380821 HIST1H2ACQ93077 130 aa17.17■□□□□ 0.34
SNAPC3-202ENST00000380821 RBM4BQ9BQ04 359 aaKnown RBP17.17■□□□□ 0.34
SNAPC3-202ENST00000380821 RBM4Q9BWF3 364 aaKnown RBP17.17■□□□□ 0.34
SNAPC3-202ENST00000380821 MRPL9Q9BYD2 267 aaKnown RBP17.17■□□□□ 0.34
SNAPC3-202ENST00000380821 ASB8Q9H765 288 aa17.17■□□□□ 0.34
SNAPC3-202ENST00000380821 LRRC4CQ9HCJ2 640 aa17.17■□□□□ 0.34
SNAPC3-202ENST00000380821 TRMUO75648 421 aaKnown RBP17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 CES1P23141 567 aa17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 TUFMP49411 452 aaKnown RBP17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 THAP5Q7Z6K1 395 aa17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 ECHDC2Q86YB7 292 aa17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 LEMD2Q8NC56 503 aa17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 A0A0J9YYE9 177 aa17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 RGS20O76081 388 aa17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 HLA-DQA2P01906 255 aa17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 ENO2P09104 434 aaPredicted RBP17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 TLX1P31314 330 aaPredicted RBP17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 ZNHIT3Q15649 155 aaPredicted RBP17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 PPP1R15BQ5SWA1 713 aa17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 RNF220Q5VTB9 566 aa17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 FAM171A1Q5VUB5 890 aa17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 ANKRD52Q8NB46 1076 aa17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 ZFP14Q9HCL3 533 aa17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 PSME2Q9UL46 239 aa17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 NTRK1P04629 796 aa17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 MTAPQ13126 283 aa17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 PCBP1Q15365 356 aaKnown RBP eCLIP17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 MED22Q15528 200 aa17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 ZC3H12AQ5D1E8 599 aaKnown RBP17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 SMYD1Q8NB12 490 aa17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 OR52E6Q96RD3 313 aa17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 TRIT1Q9H3H1 467 aaKnown RBP17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 TRAF6Q9Y4K3 522 aa17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 FFAR3O14843 346 aa17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 GPR42O15529 346 aa17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 OR10H3O60404 316 aa17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 TIPRLO75663 272 aa17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 LYNP07948 512 aa17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 HNRNPLP14866 589 aaKnown RBP eCLIP17.16■□□□□ 0.347e-13■■■■■ 49.6
SNAPC3-202ENST00000380821 CHPFQ8IZ52 775 aa17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 PGAM4Q8N0Y7 254 aa17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 ZNF607Q96SK3 696 aa17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 NEK6Q9HC98 313 aa17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 MARCH2Q9P0N8 246 aa17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 LGALS13Q9UHV8 139 aa17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 PCDHGA3Q9Y5H0 932 aa17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 RGL2O15211 777 aa17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 FADS2O95864 444 aaKnown RBP17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 FTH1P02794 183 aa17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 GOT1P17174 413 aa17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 PAX3P23760 479 aa17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 POTEHQ6S545 545 aa17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 GK5Q6ZS86 529 aa17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 CCDC36Q8IYA8 594 aa17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 OR4A15Q8NGL6 344 aa17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 PIH1D2Q8WWB5 315 aa17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 SENP8Q96LD8 212 aa17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 BTBD9Q96Q07 612 aa17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 PANX1Q96RD7 426 aa17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 PCDH12Q9NPG4 1184 aa17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 POLR3HQ9Y535 204 aaPredicted RBP17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 TNS2Q63HR2 1409 aa17.16■□□□□ 0.34
SNAPC3-202ENST00000380821 RFXANKO14593 260 aa17.15■□□□□ 0.34
SNAPC3-202ENST00000380821 SERPINB7O75635 380 aa17.15■□□□□ 0.34
SNAPC3-202ENST00000380821 CELF2O95319 508 aaKnown RBP17.15■□□□□ 0.34
SNAPC3-202ENST00000380821 GALK1P51570 392 aa17.15■□□□□ 0.34
SNAPC3-202ENST00000380821 BIKQ13323 160 aa17.15■□□□□ 0.34
SNAPC3-202ENST00000380821 LSM12Q3MHD2 195 aaKnown RBP17.15■□□□□ 0.34
SNAPC3-202ENST00000380821 GPAT3Q53EU6 434 aa17.15■□□□□ 0.34
SNAPC3-202ENST00000380821 EGFLAMQ63HQ2 1017 aa17.15■□□□□ 0.34
SNAPC3-202ENST00000380821 CRTC3Q6UUV7 619 aa17.15■□□□□ 0.34
SNAPC3-202ENST00000380821 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.15■□□□□ 0.34
SNAPC3-202ENST00000380821 HM13Q8TCT9 377 aa17.15■□□□□ 0.34
SNAPC3-202ENST00000380821 SLC9A7Q96T83 725 aa17.15■□□□□ 0.34
SNAPC3-202ENST00000380821 ACP6Q9NPH0 428 aa17.15■□□□□ 0.34
SNAPC3-202ENST00000380821 GNEQ9Y223 722 aaKnown RBP17.15■□□□□ 0.34
SNAPC3-202ENST00000380821 USP20Q9Y2K6 914 aa17.15■□□□□ 0.34
SNAPC3-202ENST00000380821 SPATA31A6Q5VVP1 1343 aa17.15■□□□□ 0.34
SNAPC3-202ENST00000380821 MEGF6O75095 1541 aa17.15■□□□□ 0.34
SNAPC3-202ENST00000380821 SEMA3DO95025 777 aa17.15■□□□□ 0.34
SNAPC3-202ENST00000380821 NUDT14O95848 222 aa17.15■□□□□ 0.34
SNAPC3-202ENST00000380821 IL18R1Q13478 541 aa17.15■□□□□ 0.34
SNAPC3-202ENST00000380821 APTXQ7Z2E3 356 aaKnown RBP17.15■□□□□ 0.34
SNAPC3-202ENST00000380821 IDI2Q9BXS1 227 aa17.15■□□□□ 0.34
SNAPC3-202ENST00000380821 ZDHHC6Q9H6R6 413 aa17.15■□□□□ 0.34
SNAPC3-202ENST00000380821 EFR3BQ9Y2G0 817 aa17.15■□□□□ 0.34
SNAPC3-202ENST00000380821 DCDC2CA8MYV0 355 aa17.15■□□□□ 0.34
SNAPC3-202ENST00000380821 ABATP80404 500 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms