RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 MAGEB10Q96LZ2 347 aaPredicted RBP8.43□□□□□ -1.06
VPS36-201ENST00000378060 ZNF317Q96PQ6 595 aaPredicted RBP8.43□□□□□ -1.06
VPS36-201ENST00000378060 PLEKHG4BQ96PX9 1271 aa8.43□□□□□ -1.06
VPS36-201ENST00000378060 TBCDQ9BTW9 1192 aa8.43□□□□□ -1.06
VPS36-201ENST00000378060 DUSP16Q9BY84 665 aa8.43□□□□□ -1.06
VPS36-201ENST00000378060 PRDM5Q9NQX1 630 aaPredicted RBP8.43□□□□□ -1.06
VPS36-201ENST00000378060 CRNNQ9UBG3 495 aaPredicted RBP8.43□□□□□ -1.06
VPS36-201ENST00000378060 KLQ9UEF7 1012 aa8.43□□□□□ -1.06
VPS36-201ENST00000378060 ZMYM5Q9UJ78 669 aa8.43□□□□□ -1.06
VPS36-201ENST00000378060 TRPV2Q9Y5S1 764 aa8.43□□□□□ -1.06
VPS36-201ENST00000378060 LOC285556D6RIA3 1793 aa8.43□□□□□ -1.06
VPS36-201ENST00000378060 A0A0G2JLL6 359 aaPredicted RBP8.43□□□□□ -1.06
VPS36-201ENST00000378060 PARNO95453 639 aaKnown RBP8.43□□□□□ -1.06
VPS36-201ENST00000378060 CCNE2O96020 404 aa8.43□□□□□ -1.06
VPS36-201ENST00000378060 OTCP00480 354 aa8.43□□□□□ -1.06
VPS36-201ENST00000378060 FGF1P05230 155 aa8.43□□□□□ -1.06
VPS36-201ENST00000378060 EPB42P16452 691 aa8.43□□□□□ -1.06
VPS36-201ENST00000378060 CES1P23141 567 aa8.43□□□□□ -1.06
VPS36-201ENST00000378060 TPP2P29144 1249 aaPredicted RBP8.43□□□□□ -1.06
VPS36-201ENST00000378060 ADORA2AP29274 412 aa8.43□□□□□ -1.06
VPS36-201ENST00000378060 CD86P42081 329 aa8.43□□□□□ -1.06
VPS36-201ENST00000378060 IL12RB1P42701 662 aa8.43□□□□□ -1.06
VPS36-201ENST00000378060 PTPN9P43378 593 aa8.43□□□□□ -1.06
VPS36-201ENST00000378060 MAPK8P45983 427 aa8.43□□□□□ -1.06
VPS36-201ENST00000378060 LIMK2P53671 638 aa8.43□□□□□ -1.06
VPS36-201ENST00000378060 BCL2L1Q07817 233 aa8.43□□□□□ -1.06
VPS36-201ENST00000378060 TRIM25Q14258 630 aaKnown RBP8.43□□□□□ -1.06
VPS36-201ENST00000378060 NR1D2Q14995 579 aa8.43□□□□□ -1.06
VPS36-201ENST00000378060 PPP1R15BQ5SWA1 713 aa8.43□□□□□ -1.06
VPS36-201ENST00000378060 FNBP1LQ5T0N5 605 aa8.43□□□□□ -1.06
VPS36-201ENST00000378060 SPRYD7Q5W111 196 aa8.43□□□□□ -1.06
VPS36-201ENST00000378060 LPCAT4Q643R3 524 aa8.43□□□□□ -1.06
VPS36-201ENST00000378060 KIAA0408Q6ZU52 694 aa8.43□□□□□ -1.06
VPS36-201ENST00000378060 PRRT2Q7Z6L0 340 aaPredicted RBP8.43□□□□□ -1.06
VPS36-201ENST00000378060 HPS6Q86YV9 775 aa8.43□□□□□ -1.06
VPS36-201ENST00000378060 DSELQ8IZU8 1212 aa8.43□□□□□ -1.06
VPS36-201ENST00000378060 DEPDC4Q8N2C3 294 aa8.43□□□□□ -1.06
VPS36-201ENST00000378060 TOP6BLQ8N6T0 577 aa8.43□□□□□ -1.06
VPS36-201ENST00000378060 FAM47BQ8NA70 645 aa8.43□□□□□ -1.06
VPS36-201ENST00000378060 GAD1Q99259 594 aa8.43□□□□□ -1.06
VPS36-201ENST00000378060 RHOBTB2Q9BYZ6 727 aa8.43□□□□□ -1.06
VPS36-201ENST00000378060 ZYG11BQ9C0D3 744 aa8.43□□□□□ -1.06
VPS36-201ENST00000378060 SENP6Q9GZR1 1112 aaPredicted RBP8.43□□□□□ -1.06
VPS36-201ENST00000378060 NOL6Q9H6R4 1146 aaKnown RBP8.43□□□□□ -1.06
VPS36-201ENST00000378060 PTPRHQ9HD43 1115 aa8.43□□□□□ -1.06
VPS36-201ENST00000378060 PNPLA8Q9NP80 782 aa8.43□□□□□ -1.06
VPS36-201ENST00000378060 ARL15Q9NXU5 204 aa8.43□□□□□ -1.06
VPS36-201ENST00000378060 M0R2N6 131 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 STAU1O95793 577 aaKnown RBP8.42□□□□□ -1.06
VPS36-201ENST00000378060 IGSF6O95976 241 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 CATP04040 527 aaKnown RBP8.42□□□□□ -1.06
VPS36-201ENST00000378060 UNGP13051 313 aaPredicted RBP8.42□□□□□ -1.06
VPS36-201ENST00000378060 RPL9P32969 192 aaKnown RBP8.42□□□□□ -1.06
VPS36-201ENST00000378060 IFNGR2P38484 337 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 GRIK3Q13003 919 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 CTBP1Q13363 440 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 ZNF846Q147U1 533 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 PTPRNQ16849 979 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 RNF220Q5VTB9 566 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 ITIH5Q86UX2 942 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 BPIFB6Q8NFQ5 453 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 ENKURQ8TC29 256 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 MYDGFQ969H8 173 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 TPD52L3Q96J77 140 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 QKIQ96PU8 341 aaKnown RBP eCLIP8.42□□□□□ -1.066e-6■■□□□ 11.6
VPS36-201ENST00000378060 GLOD4Q9HC38 313 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 GNEQ9Y223 722 aaKnown RBP8.42□□□□□ -1.06
VPS36-201ENST00000378060 RIPK3Q9Y572 518 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 GMPPBQ9Y5P6 360 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 FADS3Q9Y5Q0 445 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 SESN1Q9Y6P5 492 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 TBKBP1A7MCY6 615 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 SLC28A1O00337 649 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 TRMUO75648 421 aaKnown RBP8.42□□□□□ -1.06
VPS36-201ENST00000378060 ALOX5P09917 674 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 HNRNPLP14866 589 aaKnown RBP eCLIP8.42□□□□□ -1.06
VPS36-201ENST00000378060 PCSK2P16519 638 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 JAK1P23458 1154 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 WNT3AP56704 352 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 WDR4P57081 412 aaKnown RBP8.42□□□□□ -1.06
VPS36-201ENST00000378060 POLR2LP62875 67 aaKnown RBP8.42□□□□□ -1.06
VPS36-201ENST00000378060 SPIRE1Q08AE8 756 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 SREBF2Q12772 1141 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 DGCR6Q14129 220 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 CRY1Q16526 586 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 GPR107Q5VW38 600 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 ISLR2Q6UXK2 745 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 SPATA19Q7Z5L4 167 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 CDK20Q8IZL9 346 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 EFCAB3Q8N7B9 438 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 BTN2A2Q8WVV5 523 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 NIFKQ9BYG3 293 aaKnown RBP8.42□□□□□ -1.06
VPS36-201ENST00000378060 WDR55Q9H6Y2 383 aaPredicted RBP8.42□□□□□ -1.06
VPS36-201ENST00000378060 GSTK1Q9Y2Q3 226 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 PCDHB12Q9Y5F1 795 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 TLL2Q9Y6L7 1015 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 FAM155AB1AL88 458 aaPredicted RBP8.42□□□□□ -1.06
VPS36-201ENST00000378060 BTBD19C9JJ37 291 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 MYL12BO14950 172 aa8.42□□□□□ -1.06
VPS36-201ENST00000378060 SLC22A2O15244 555 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms