RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 AHI1Q8N157 1196 aa12.14□□□□□ -0.47
USF1-203ENST00000368021 MZB1Q8WU39 189 aa12.14□□□□□ -0.47
USF1-203ENST00000368021 ATP2A3Q93084 1043 aa12.14□□□□□ -0.47
USF1-203ENST00000368021 NSMCE3Q96MG7 304 aa12.14□□□□□ -0.47
USF1-203ENST00000368021 FAM83CQ9BQN1 747 aa12.14□□□□□ -0.47
USF1-203ENST00000368021 CEP44Q9C0F1 390 aa12.14□□□□□ -0.47
USF1-203ENST00000368021 TREX1Q9NSU2 369 aa12.14□□□□□ -0.47
USF1-203ENST00000368021 THG1LQ9NWX6 298 aaKnown RBP12.14□□□□□ -0.47
USF1-203ENST00000368021 ZFATQ9P243 1243 aa12.14□□□□□ -0.47
USF1-203ENST00000368021 ANKRD36A6QL64 1941 aa12.14□□□□□ -0.47
USF1-203ENST00000368021 FAM86C2PA6NEL3 165 aa12.14□□□□□ -0.47
USF1-203ENST00000368021 MROH6A6NGR9 719 aa12.14□□□□□ -0.47
USF1-203ENST00000368021 SMAD6O43541 496 aaKnown RBP12.14□□□□□ -0.47
USF1-203ENST00000368021 FAM155BO75949 473 aa12.14□□□□□ -0.47
USF1-203ENST00000368021 KRT37O76014 449 aa12.14□□□□□ -0.47
USF1-203ENST00000368021 KRT15P19012 456 aa12.14□□□□□ -0.47
USF1-203ENST00000368021 PAMP19021 973 aa12.14□□□□□ -0.47
USF1-203ENST00000368021 NMBRP28336 390 aa12.14□□□□□ -0.47
USF1-203ENST00000368021 VASPP50552 380 aaPredicted RBP12.14□□□□□ -0.47
USF1-203ENST00000368021 RIPK1Q13546 671 aa12.14□□□□□ -0.47
USF1-203ENST00000368021 PDGFRLQ15198 375 aa12.14□□□□□ -0.47
USF1-203ENST00000368021 CAPRIN2Q6IMN6 1127 aaKnown RBP12.14□□□□□ -0.47
USF1-203ENST00000368021 CES3Q6UWW8 571 aa12.14□□□□□ -0.47
USF1-203ENST00000368021 MTSS1LQ765P7 747 aa12.14□□□□□ -0.47
USF1-203ENST00000368021 ADIPOR2Q86V24 386 aa12.14□□□□□ -0.47
USF1-203ENST00000368021 SRRM1Q8IYB3 904 aaKnown RBP12.14□□□□□ -0.47
USF1-203ENST00000368021 UNC5BQ8IZJ1 945 aa12.14□□□□□ -0.47
USF1-203ENST00000368021 MTBPQ96DY7 904 aa12.14□□□□□ -0.47
USF1-203ENST00000368021 MRRFQ96E11 262 aaKnown RBP12.14□□□□□ -0.47
USF1-203ENST00000368021 ASIC4Q96FT7 647 aa12.14□□□□□ -0.47
USF1-203ENST00000368021 ZNF778Q96MU6 729 aa12.14□□□□□ -0.47
USF1-203ENST00000368021 ADGRE3Q9BY15 652 aa12.14□□□□□ -0.47
USF1-203ENST00000368021 PPANQ9NQ55 473 aaKnown RBP12.14□□□□□ -0.47
USF1-203ENST00000368021 SLC25A13Q9UJS0 675 aa12.14□□□□□ -0.47
USF1-203ENST00000368021 SLC27A6Q9Y2P4 619 aa12.14□□□□□ -0.47
USF1-203ENST00000368021 RAI2Q9Y5P3 530 aa12.14□□□□□ -0.47
USF1-203ENST00000368021 MYLKQ15746 1914 aa12.13□□□□□ -0.47
USF1-203ENST00000368021 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.13□□□□□ -0.47
USF1-203ENST00000368021 K7ERQ8 282 aa12.13□□□□□ -0.47
USF1-203ENST00000368021 ZNF821O75541 412 aaPredicted RBP12.13□□□□□ -0.47
USF1-203ENST00000368021 KRT38O76015 456 aa12.13□□□□□ -0.47
USF1-203ENST00000368021 IGSF6O95976 241 aa12.13□□□□□ -0.47
USF1-203ENST00000368021 PRLP01236 227 aa12.13□□□□□ -0.47
USF1-203ENST00000368021 SRCP12931 536 aa12.13□□□□□ -0.47
USF1-203ENST00000368021 ZXDAP98168 799 aa12.13□□□□□ -0.47
USF1-203ENST00000368021 ECT2LQ008S8 904 aa12.13□□□□□ -0.47
USF1-203ENST00000368021 TRIM68Q6AZZ1 485 aa12.13□□□□□ -0.47
USF1-203ENST00000368021 KIAA0930Q6ICG6 404 aaPredicted RBP12.13□□□□□ -0.47
USF1-203ENST00000368021 KCNMB4Q86W47 210 aa12.13□□□□□ -0.47
USF1-203ENST00000368021 MFSD6LQ8IWD5 586 aa12.13□□□□□ -0.47
USF1-203ENST00000368021 BRSK1Q8TDC3 778 aa12.13□□□□□ -0.47
USF1-203ENST00000368021 WFIKKN2Q8TEU8 576 aa12.13□□□□□ -0.47
USF1-203ENST00000368021 CPNE1Q99829 537 aa12.13□□□□□ -0.47
USF1-203ENST00000368021 SSU72Q9NP77 194 aaKnown RBP12.13□□□□□ -0.47
USF1-203ENST00000368021 NSMCE4AQ9NXX6 385 aa12.13□□□□□ -0.47
USF1-203ENST00000368021 RIMKLBQ9ULI2 386 aa12.13□□□□□ -0.47
USF1-203ENST00000368021 VPS13AQ96RL7 3174 aa12.13□□□□□ -0.47
USF1-203ENST00000368021 SOCS5O75159 536 aa12.12□□□□□ -0.47
USF1-203ENST00000368021 GSRP00390 522 aa12.12□□□□□ -0.47
USF1-203ENST00000368021 SNRPAP09012 282 aaKnown RBP12.12□□□□□ -0.47
USF1-203ENST00000368021 CISD3P0C7P0 127 aa12.12□□□□□ -0.47
USF1-203ENST00000368021 ERVK-10P10266 1014 aa12.12□□□□□ -0.47
USF1-203ENST00000368021 CTSOP43234 321 aaPredicted RBP12.12□□□□□ -0.47
USF1-203ENST00000368021 ARCN1P48444 511 aaKnown RBP12.12□□□□□ -0.47
USF1-203ENST00000368021 DGKGP49619 791 aa12.12□□□□□ -0.47
USF1-203ENST00000368021 ATP1A2P50993 1020 aa12.12□□□□□ -0.47
USF1-203ENST00000368021 SLC18A1P54219 525 aa12.12□□□□□ -0.47
USF1-203ENST00000368021 RPL26P61254 145 aaKnown RBP12.12□□□□□ -0.47
USF1-203ENST00000368021 SNRPD1P62314 119 aaKnown RBP12.12□□□□□ -0.47
USF1-203ENST00000368021 TRAF2Q12933 501 aa12.12□□□□□ -0.47
USF1-203ENST00000368021 ZRSR2Q15696 482 aaKnown RBP12.12□□□□□ -0.47
USF1-203ENST00000368021 TSTD2Q5T7W7 516 aa12.12□□□□□ -0.47
USF1-203ENST00000368021 TEDDM1Q5T9Z0 273 aa12.12□□□□□ -0.47
USF1-203ENST00000368021 MBLAC2Q68D91 279 aa12.12□□□□□ -0.47
USF1-203ENST00000368021 VITQ6UXI7 678 aa12.12□□□□□ -0.47
USF1-203ENST00000368021 RASSF3Q86WH2 238 aa12.12□□□□□ -0.47
USF1-203ENST00000368021 CNTN4Q8IWV2 1026 aa12.12□□□□□ -0.47
USF1-203ENST00000368021 ETFBKMTQ8IXQ9 262 aa12.12□□□□□ -0.47
USF1-203ENST00000368021 PLPP6Q8IY26 295 aa12.12□□□□□ -0.47
USF1-203ENST00000368021 PCDH20Q8N6Y1 951 aaKnown RBP12.12□□□□□ -0.47
USF1-203ENST00000368021 GBP7Q8N8V2 638 aaPredicted RBP12.12□□□□□ -0.47
USF1-203ENST00000368021 OR2AP1Q8NGE2 309 aa12.12□□□□□ -0.47
USF1-203ENST00000368021 EDAQ92838 391 aa12.12□□□□□ -0.47
USF1-203ENST00000368021 ALKBH8Q96BT7 664 aaKnown RBP12.12□□□□□ -0.47
USF1-203ENST00000368021 SPDL1Q96EA4 605 aa12.12□□□□□ -0.47
USF1-203ENST00000368021 TM6SF2Q9BZW4 377 aa12.12□□□□□ -0.47
USF1-203ENST00000368021 TRABDQ9H4I3 376 aa12.12□□□□□ -0.47
USF1-203ENST00000368021 C20orf96Q9NUD7 363 aaPredicted RBP12.12□□□□□ -0.47
USF1-203ENST00000368021 RPL26L1Q9UNX3 145 aaKnown RBP12.12□□□□□ -0.47
USF1-203ENST00000368021 CHKBQ9Y259 395 aa12.12□□□□□ -0.47
USF1-203ENST00000368021 PCDHGC4Q9Y5F7 938 aa12.12□□□□□ -0.47
USF1-203ENST00000368021 ANKRD66B4E2M5 251 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 HTRA2O43464 458 aaPredicted RBP12.11□□□□□ -0.47
USF1-203ENST00000368021 LDB2O43679 373 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 FZD6O60353 706 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 SIN3BO75182 1162 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 ECI2O75521 394 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 BRAFP15056 766 aa12.11□□□□□ -0.47
USF1-203ENST00000368021 POLR2EP19388 210 aaKnown RBP12.11□□□□□ -0.47
USF1-203ENST00000368021 GP5P40197 560 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms