RNA–Protein interactions for RNA: ENST00000308271.13

USP48-201, Transcript of ubiquitin specific peptidase 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP48, Length 4,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-201ENST00000308271 OLFM1Q99784 485 aa19.38■□□□□ 0.69
USP48-201ENST00000308271 MYH15Q9Y2K3 1946 aa19.38■□□□□ 0.69
USP48-201ENST00000308271 SYNDIG1LA6NDD5 238 aa19.38■□□□□ 0.69
USP48-201ENST00000308271 RNASEH1O60930 286 aaKnown RBP19.38■□□□□ 0.69
USP48-201ENST00000308271 OR1E1P30953 314 aa19.38■□□□□ 0.69
USP48-201ENST00000308271 OR1G1P47890 313 aa19.38■□□□□ 0.69
USP48-201ENST00000308271 TRIP4Q15650 581 aaPredicted RBP19.38■□□□□ 0.69
USP48-201ENST00000308271 PAN2Q504Q3 1202 aaKnown RBP19.38■□□□□ 0.69
USP48-201ENST00000308271 KIAA0408Q6ZU52 694 aa19.38■□□□□ 0.69
USP48-201ENST00000308271 GBA3Q9H227 469 aa19.38■□□□□ 0.69
USP48-201ENST00000308271 GLOD4Q9HC38 313 aa19.38■□□□□ 0.69
USP48-201ENST00000308271 DYRK4Q9NR20 520 aa19.38■□□□□ 0.69
USP48-201ENST00000308271 ZBTB24O43167 697 aaPredicted RBP19.37■□□□□ 0.69
USP48-201ENST00000308271 C4BPBP20851 252 aa19.37■□□□□ 0.69
USP48-201ENST00000308271 NRLP54845 237 aa19.37■□□□□ 0.69
USP48-201ENST00000308271 VPS26BQ4G0F5 336 aa19.37■□□□□ 0.69
USP48-201ENST00000308271 INTS6LQ5JSJ4 861 aaKnown RBP19.37■□□□□ 0.69
USP48-201ENST00000308271 INTS11Q5TA45 600 aaKnown RBP19.37■□□□□ 0.69
USP48-201ENST00000308271 IL23RQ5VWK5 629 aa19.37■□□□□ 0.69
USP48-201ENST00000308271 GCNT7Q6ZNI0 430 aa19.37■□□□□ 0.69
USP48-201ENST00000308271 CDYL2Q8N8U2 506 aa19.37■□□□□ 0.69
USP48-201ENST00000308271 MRPL45Q9BRJ2 306 aaKnown RBP19.37■□□□□ 0.69
USP48-201ENST00000308271 PNMA8BQ9ULN7 279 aaPredicted RBP19.37■□□□□ 0.69
USP48-201ENST00000308271 AQP12BA6NM10 295 aa19.37■□□□□ 0.69
USP48-201ENST00000308271 CENPXA8MT69 81 aa19.37■□□□□ 0.69
USP48-201ENST00000308271 CHRNGP07510 517 aa19.37■□□□□ 0.69
USP48-201ENST00000308271 DPEP1P16444 411 aa19.37■□□□□ 0.69
USP48-201ENST00000308271 MZF1P28698 734 aaPredicted RBP19.37■□□□□ 0.69
USP48-201ENST00000308271 PAGE2Q7Z2X7 111 aa19.37■□□□□ 0.69
USP48-201ENST00000308271 AQP12AQ8IXF9 295 aa19.37■□□□□ 0.69
USP48-201ENST00000308271 STK40Q8N2I9 435 aa19.37■□□□□ 0.69
USP48-201ENST00000308271 SREK1IP1Q8N9Q2 155 aaPredicted RBP19.37■□□□□ 0.69
USP48-201ENST00000308271 OR2T12Q8NG77 320 aa19.37■□□□□ 0.69
USP48-201ENST00000308271 SENP8Q96LD8 212 aa19.37■□□□□ 0.69
USP48-201ENST00000308271 ABCC13Q9NSE7 274 aa19.37■□□□□ 0.69
USP48-201ENST00000308271 OXSMQ9NWU1 459 aa19.37■□□□□ 0.69
USP48-201ENST00000308271 UBAP1Q9NZ09 502 aa19.37■□□□□ 0.69
USP48-201ENST00000308271 DTLQ9NZJ0 730 aa19.37■□□□□ 0.69
USP48-201ENST00000308271 IGSF9Q9P2J2 1179 aa19.37■□□□□ 0.69
USP48-201ENST00000308271 CNTN6Q9UQ52 1028 aa19.37■□□□□ 0.69
USP48-201ENST00000308271 CYBBP04839 570 aa19.37■□□□□ 0.69
USP48-201ENST00000308271 FGFR1P11362 822 aa19.37■□□□□ 0.69
USP48-201ENST00000308271 MERTKQ12866 999 aa19.37■□□□□ 0.69
USP48-201ENST00000308271 OVOS1Q6IE37 1185 aa19.37■□□□□ 0.69
USP48-201ENST00000308271 OFCC1Q8IZS5 231 aa19.37■□□□□ 0.69
USP48-201ENST00000308271 PHTF2Q8N3S3 785 aa19.37■□□□□ 0.69
USP48-201ENST00000308271 UBASH3BQ8TF42 649 aa19.37■□□□□ 0.69
USP48-201ENST00000308271 OR52B2Q96RD2 323 aa19.37■□□□□ 0.69
USP48-201ENST00000308271 FBXO44Q9H4M3 255 aa19.37■□□□□ 0.69
USP48-201ENST00000308271 RAPGEFL1Q9UHV5 662 aa19.37■□□□□ 0.69
USP48-201ENST00000308271 ZNF536O15090 1300 aa19.37■□□□□ 0.69
USP48-201ENST00000308271 E7ESA3 106 aa19.37■□□□□ 0.69
USP48-201ENST00000308271 CHI3L1P36222 383 aaPredicted RBP19.37■□□□□ 0.69
USP48-201ENST00000308271 WNT3AP56704 352 aa19.37■□□□□ 0.69
USP48-201ENST00000308271 OGDHQ02218 1023 aa19.37■□□□□ 0.69
USP48-201ENST00000308271 SLC25A11Q02978 314 aaKnown RBP19.37■□□□□ 0.69
USP48-201ENST00000308271 LIPEQ05469 1076 aa19.37■□□□□ 0.69
USP48-201ENST00000308271 ATG14Q6ZNE5 492 aa19.37■□□□□ 0.69
USP48-201ENST00000308271 PKP2Q99959 881 aa19.37■□□□□ 0.69
USP48-201ENST00000308271 TSEN34Q9BSV6 310 aaKnown RBP19.37■□□□□ 0.69
USP48-201ENST00000308271 CCDC106Q9BWC9 280 aa19.37■□□□□ 0.69
USP48-201ENST00000308271 DUSP16Q9BY84 665 aa19.37■□□□□ 0.69
USP48-201ENST00000308271 LGALS2P05162 132 aa19.36■□□□□ 0.69
USP48-201ENST00000308271 RHOCP08134 193 aa19.36■□□□□ 0.69
USP48-201ENST00000308271 IMPDH2P12268 514 aa19.36■□□□□ 0.69
USP48-201ENST00000308271 CKMT2P17540 419 aa19.36■□□□□ 0.69
USP48-201ENST00000308271 GRM5P41594 1212 aa19.36■□□□□ 0.69
USP48-201ENST00000308271 IDH2P48735 452 aaKnown RBP19.36■□□□□ 0.69
USP48-201ENST00000308271 CNTN1Q12860 1018 aa19.36■□□□□ 0.69
USP48-201ENST00000308271 DLG2Q15700 870 aa19.36■□□□□ 0.69
USP48-201ENST00000308271 WSCD1Q658N2 575 aa19.36■□□□□ 0.69
USP48-201ENST00000308271 MBLAC2Q68D91 279 aa19.36■□□□□ 0.69
USP48-201ENST00000308271 SCIMPQ6UWF3 145 aa19.36■□□□□ 0.69
USP48-201ENST00000308271 CATSPERGQ6ZRH7 1159 aa19.36■□□□□ 0.69
USP48-201ENST00000308271 HDAC10Q969S8 669 aa19.36■□□□□ 0.69
USP48-201ENST00000308271 PCDHAC1Q9H158 963 aa19.36■□□□□ 0.69
USP48-201ENST00000308271 TLE6Q9H808 572 aa19.36■□□□□ 0.69
USP48-201ENST00000308271 ZNF358Q9NW07 568 aa19.36■□□□□ 0.69
USP48-201ENST00000308271 GNG14A0A1W2PPG7 69 aa19.36■□□□□ 0.69
USP48-201ENST00000308271 EPN2O95208 641 aa19.36■□□□□ 0.69
USP48-201ENST00000308271 TALDO1P37837 337 aa19.36■□□□□ 0.69
USP48-201ENST00000308271 KPNA1P52294 538 aaPredicted RBP19.36■□□□□ 0.69
USP48-201ENST00000308271 MTA1Q13330 715 aa19.36■□□□□ 0.69
USP48-201ENST00000308271 ARHGAP17Q68EM7 881 aa19.36■□□□□ 0.69
USP48-201ENST00000308271 DENND5AQ6IQ26 1287 aa19.36■□□□□ 0.69
USP48-201ENST00000308271 MPP5Q8N3R9 675 aa19.36■□□□□ 0.69
USP48-201ENST00000308271 PHF21AQ96BD5 680 aa19.36■□□□□ 0.69
USP48-201ENST00000308271 ALG2Q9H553 416 aa19.36■□□□□ 0.69
USP48-201ENST00000308271 WDR37Q9Y2I8 494 aa19.36■□□□□ 0.69
USP48-201ENST00000308271 TOPAZ1Q8N9V7 1692 aa19.36■□□□□ 0.69
USP48-201ENST00000308271 FAM220BPB1ANY3 271 aa19.36■□□□□ 0.69
USP48-201ENST00000308271 PTPRAP18433 802 aa19.36■□□□□ 0.69
USP48-201ENST00000308271 ZNF621Q6ZSS3 439 aa19.36■□□□□ 0.69
USP48-201ENST00000308271 YTHDF1Q9BYJ9 559 aaKnown RBP19.36■□□□□ 0.69
USP48-201ENST00000308271 TBCCD1Q9NVR7 557 aa19.36■□□□□ 0.69
USP48-201ENST00000308271 SUCOQ9UBS9 1254 aaKnown RBP19.36■□□□□ 0.69
USP48-201ENST00000308271 KLQ9UEF7 1012 aa19.36■□□□□ 0.69
USP48-201ENST00000308271 PTBP2Q9UKA9 531 aaKnown RBP19.36■□□□□ 0.69
USP48-201ENST00000308271 DGKBQ9Y6T7 804 aa19.36■□□□□ 0.69
USP48-201ENST00000308271 GPR182O15218 404 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms