RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 SEMA3CQ99985 751 aa16.53■□□□□ 0.24
SH3RF1-201ENST00000284637 C8orf4Q9NR00 106 aa16.53■□□□□ 0.24
SH3RF1-201ENST00000284637 TOR4AQ9NXH8 423 aa16.53■□□□□ 0.24
SH3RF1-201ENST00000284637 TMEM216Q9P0N5 145 aa16.53■□□□□ 0.24
SH3RF1-201ENST00000284637 ZNHIT2Q9UHR6 403 aa16.53■□□□□ 0.24
SH3RF1-201ENST00000284637 VAV3Q9UKW4 847 aa16.53■□□□□ 0.24
SH3RF1-201ENST00000284637 CLUHO75153 1309 aa16.53■□□□□ 0.24
SH3RF1-201ENST00000284637 CYP4B1P13584 511 aa16.53■□□□□ 0.24
SH3RF1-201ENST00000284637 ACTR3P61158 418 aa16.53■□□□□ 0.24
SH3RF1-201ENST00000284637 SEMA5AQ13591 1074 aa16.53■□□□□ 0.24
SH3RF1-201ENST00000284637 HYIQ5T013 277 aa16.53■□□□□ 0.24
SH3RF1-201ENST00000284637 IZUMO1Q8IYV9 350 aa16.53■□□□□ 0.24
SH3RF1-201ENST00000284637 MCFD2Q8NI22 146 aa16.53■□□□□ 0.24
SH3RF1-201ENST00000284637 CPT1BQ92523 772 aa16.53■□□□□ 0.24
SH3RF1-201ENST00000284637 ASB8Q9H765 288 aa16.53■□□□□ 0.24
SH3RF1-201ENST00000284637 RAPGEFL1Q9UHV5 662 aa16.53■□□□□ 0.24
SH3RF1-201ENST00000284637 QPRTQ15274 297 aa16.53■□□□□ 0.24
SH3RF1-201ENST00000284637 PPP1R26Q5T8A7 1209 aaPredicted RBP16.53■□□□□ 0.24
SH3RF1-201ENST00000284637 ZNF549Q6P9A3 640 aa16.53■□□□□ 0.24
SH3RF1-201ENST00000284637 GPRIN3Q6ZVF9 776 aa16.53■□□□□ 0.24
SH3RF1-201ENST00000284637 APTXQ7Z2E3 356 aaKnown RBP16.53■□□□□ 0.24
SH3RF1-201ENST00000284637 CLYBLQ8N0X4 340 aa16.53■□□□□ 0.24
SH3RF1-201ENST00000284637 SPEF1Q9Y4P9 236 aa16.53■□□□□ 0.24
SH3RF1-201ENST00000284637 LYVE1Q9Y5Y7 322 aa16.53■□□□□ 0.24
SH3RF1-201ENST00000284637 SAGE2PA6NJ88 616 aa16.52■□□□□ 0.24
SH3RF1-201ENST00000284637 ERBB2P04626 1255 aa16.52■□□□□ 0.24
SH3RF1-201ENST00000284637 ADORA2AP29274 412 aa16.52■□□□□ 0.24
SH3RF1-201ENST00000284637 AXLP30530 894 aa16.52■□□□□ 0.24
SH3RF1-201ENST00000284637 PTSQ03393 145 aa16.52■□□□□ 0.24
SH3RF1-201ENST00000284637 NADK2Q4G0N4 442 aa16.52■□□□□ 0.24
SH3RF1-201ENST00000284637 CDK5RAP1Q96SZ6 601 aaKnown RBP16.52■□□□□ 0.24
SH3RF1-201ENST00000284637 GSTK1Q9Y2Q3 226 aa16.52■□□□□ 0.24
SH3RF1-201ENST00000284637 MRPS7Q9Y2R9 242 aaKnown RBP16.52■□□□□ 0.24
SH3RF1-201ENST00000284637 NKRFO15226 690 aaKnown RBP eCLIP16.52■□□□□ 0.24
SH3RF1-201ENST00000284637 NRP2O60462 931 aa16.52■□□□□ 0.24
SH3RF1-201ENST00000284637 NOMO1Q15155 1222 aa16.52■□□□□ 0.24
SH3RF1-201ENST00000284637 HDAC10Q969S8 669 aa16.52■□□□□ 0.24
SH3RF1-201ENST00000284637 TTYH3Q9C0H2 523 aa16.52■□□□□ 0.24
SH3RF1-201ENST00000284637 PLK2Q9NYY3 685 aa16.52■□□□□ 0.24
SH3RF1-201ENST00000284637 TRAF6Q9Y4K3 522 aa16.52■□□□□ 0.24
SH3RF1-201ENST00000284637 U3KQV3 271 aa16.52■□□□□ 0.24
SH3RF1-201ENST00000284637 CRHR1P34998 444 aa16.52■□□□□ 0.23
SH3RF1-201ENST00000284637 SCNN1GP51170 649 aa16.52■□□□□ 0.23
SH3RF1-201ENST00000284637 FCGRTP55899 365 aa16.52■□□□□ 0.23
SH3RF1-201ENST00000284637 TUBA3CQ13748 450 aa16.52■□□□□ 0.23
SH3RF1-201ENST00000284637 PPM1JQ5JR12 505 aa16.52■□□□□ 0.23
SH3RF1-201ENST00000284637 CRTC3Q6UUV7 619 aa16.52■□□□□ 0.23
SH3RF1-201ENST00000284637 EIF3MQ7L2H7 374 aaKnown RBP16.52■□□□□ 0.23
SH3RF1-201ENST00000284637 VWDEQ8N2E2 1590 aa16.52■□□□□ 0.23
SH3RF1-201ENST00000284637 B3GNT5Q9BYG0 378 aa16.52■□□□□ 0.23
SH3RF1-201ENST00000284637 SPON1Q9HCB6 807 aa16.52■□□□□ 0.23
SH3RF1-201ENST00000284637 ROBO3Q96MS0 1386 aa16.52■□□□□ 0.23
SH3RF1-201ENST00000284637 PCDH8O95206 1070 aa16.52■□□□□ 0.23
SH3RF1-201ENST00000284637 IGSF6O95976 241 aa16.52■□□□□ 0.23
SH3RF1-201ENST00000284637 IST1P53990 364 aa16.52■□□□□ 0.23
SH3RF1-201ENST00000284637 PRKAG1P54619 331 aa16.52■□□□□ 0.23
SH3RF1-201ENST00000284637 ELAVL2Q12926 359 aaKnown RBP16.52■□□□□ 0.23
SH3RF1-201ENST00000284637 PEX6Q13608 980 aa16.52■□□□□ 0.23
SH3RF1-201ENST00000284637 DLG2Q15700 870 aa16.52■□□□□ 0.23
SH3RF1-201ENST00000284637 KHDRBS2Q5VWX1 349 aaKnown RBP16.52■□□□□ 0.23
SH3RF1-201ENST00000284637 CUZD1Q86UP6 607 aa16.52■□□□□ 0.23
SH3RF1-201ENST00000284637 ZC3H7AQ8IWR0 971 aaKnown RBP16.52■□□□□ 0.23
SH3RF1-201ENST00000284637 TMEM86AQ8N2M4 240 aa16.52■□□□□ 0.23
SH3RF1-201ENST00000284637 ZNF671Q8TAW3 534 aa16.52■□□□□ 0.23
SH3RF1-201ENST00000284637 HSPBAP1Q96EW2 488 aa16.52■□□□□ 0.23
SH3RF1-201ENST00000284637 VMP1Q96GC9 406 aa16.52■□□□□ 0.23
SH3RF1-201ENST00000284637 C7orf26Q96N11 449 aa16.52■□□□□ 0.23
SH3RF1-201ENST00000284637 SPATA7Q9P0W8 599 aa16.52■□□□□ 0.23
SH3RF1-201ENST00000284637 STOML2Q9UJZ1 356 aa16.52■□□□□ 0.23
SH3RF1-201ENST00000284637 SAMHD1Q9Y3Z3 626 aaKnown RBP16.52■□□□□ 0.23
SH3RF1-201ENST00000284637 FYNP06241 537 aa16.51■□□□□ 0.23
SH3RF1-201ENST00000284637 SLC26A3P40879 764 aa16.51■□□□□ 0.23
SH3RF1-201ENST00000284637 TGM3Q08188 693 aa16.51■□□□□ 0.23
SH3RF1-201ENST00000284637 AHI1Q8N157 1196 aa16.51■□□□□ 0.23
SH3RF1-201ENST00000284637 PPP3R2Q96LZ3 170 aa16.51■□□□□ 0.23
SH3RF1-201ENST00000284637 RPS6KA6Q9UK32 745 aa16.51■□□□□ 0.23
SH3RF1-201ENST00000284637 CLDN5O00501 218 aa16.51■□□□□ 0.23
SH3RF1-201ENST00000284637 HOXA2O43364 376 aa16.51■□□□□ 0.23
SH3RF1-201ENST00000284637 MAFO75444 373 aaPredicted RBP16.51■□□□□ 0.23
SH3RF1-201ENST00000284637 AP5B1Q2VPB7 878 aa16.51■□□□□ 0.23
SH3RF1-201ENST00000284637 MINDY2Q8NBR6 621 aa16.51■□□□□ 0.23
SH3RF1-201ENST00000284637 RASSF5Q8WWW0 418 aa16.51■□□□□ 0.23
SH3RF1-201ENST00000284637 NARS2Q96I59 477 aaKnown RBP16.51■□□□□ 0.23
SH3RF1-201ENST00000284637 PDGFDQ9GZP0 370 aaPredicted RBP16.51■□□□□ 0.23
SH3RF1-201ENST00000284637 MAGP20916 626 aa16.51■□□□□ 0.23
SH3RF1-201ENST00000284637 MATKP42679 507 aa16.51■□□□□ 0.23
SH3RF1-201ENST00000284637 GSTM5P46439 218 aa16.51■□□□□ 0.23
SH3RF1-201ENST00000284637 ANKRD22Q5VYY1 191 aa16.51■□□□□ 0.23
SH3RF1-201ENST00000284637 PAGE2Q7Z2X7 111 aa16.51■□□□□ 0.23
SH3RF1-201ENST00000284637 DSELQ8IZU8 1212 aa16.51■□□□□ 0.23
SH3RF1-201ENST00000284637 AADATQ8N5Z0 425 aa16.51■□□□□ 0.23
SH3RF1-201ENST00000284637 REPS1Q96D71 796 aa16.51■□□□□ 0.23
SH3RF1-201ENST00000284637 CPXM1Q96SM3 734 aa16.51■□□□□ 0.23
SH3RF1-201ENST00000284637 NOTOA8MTQ0 251 aa16.51■□□□□ 0.23
SH3RF1-201ENST00000284637 CYP2C18P33260 490 aa16.51■□□□□ 0.23
SH3RF1-201ENST00000284637 ACOX1Q15067 660 aa16.51■□□□□ 0.23
SH3RF1-201ENST00000284637 CPSF6Q16630 551 aaKnown RBP eCLIP16.51■□□□□ 0.23
SH3RF1-201ENST00000284637 CERS5Q8N5B7 392 aa16.51■□□□□ 0.23
SH3RF1-201ENST00000284637 STARD8Q92502 1023 aa16.51■□□□□ 0.23
SH3RF1-201ENST00000284637 EMID1Q96A84 441 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 319.1 ms