RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 GABBR2O75899 941 aa17.77■□□□□ 0.44
CDKN1B-201ENST00000228872 MBL2P11226 248 aaPredicted RBP17.77■□□□□ 0.44
CDKN1B-201ENST00000228872 HNRNPLP14866 589 aaKnown RBP eCLIP17.77■□□□□ 0.44
CDKN1B-201ENST00000228872 PTPN9P43378 593 aa17.77■□□□□ 0.44
CDKN1B-201ENST00000228872 ZNF846Q147U1 533 aa17.77■□□□□ 0.44
CDKN1B-201ENST00000228872 EEF1DP3Q658K8 133 aa17.77■□□□□ 0.44
CDKN1B-201ENST00000228872 TAPT1Q6NXT6 567 aa17.77■□□□□ 0.44
CDKN1B-201ENST00000228872 USP51Q70EK9 711 aa17.77■□□□□ 0.44
CDKN1B-201ENST00000228872 PID1Q7Z2X4 250 aa17.77■□□□□ 0.44
CDKN1B-201ENST00000228872 DNAAF3Q8N9W5 541 aa17.77■□□□□ 0.44
CDKN1B-201ENST00000228872 CCNYQ8ND76 341 aa17.77■□□□□ 0.44
CDKN1B-201ENST00000228872 BPIFB6Q8NFQ5 453 aa17.77■□□□□ 0.44
CDKN1B-201ENST00000228872 ABHD11Q8NFV4 315 aa17.77■□□□□ 0.44
CDKN1B-201ENST00000228872 HPS1Q92902 700 aa17.77■□□□□ 0.44
CDKN1B-201ENST00000228872 EFHD2Q96C19 240 aaPredicted RBP17.77■□□□□ 0.44
CDKN1B-201ENST00000228872 RAD21L1Q9H4I0 556 aa17.77■□□□□ 0.44
CDKN1B-201ENST00000228872 MEAF6Q9HAF1 191 aa17.77■□□□□ 0.44
CDKN1B-201ENST00000228872 C8orf4Q9NR00 106 aa17.77■□□□□ 0.44
CDKN1B-201ENST00000228872 TBC1D13Q9NVG8 400 aa17.77■□□□□ 0.44
CDKN1B-201ENST00000228872 TLL2Q9Y6L7 1015 aa17.77■□□□□ 0.44
CDKN1B-201ENST00000228872 NME4O00746 187 aa17.76■□□□□ 0.43
CDKN1B-201ENST00000228872 PSMA4P25789 261 aaKnown RBP17.76■□□□□ 0.43
CDKN1B-201ENST00000228872 ARL4AP40617 200 aa17.76■□□□□ 0.43
CDKN1B-201ENST00000228872 C1QTNF8P60827 252 aa17.76■□□□□ 0.43
CDKN1B-201ENST00000228872 BFSP2Q13515 415 aa17.76■□□□□ 0.43
CDKN1B-201ENST00000228872 PLCL1Q15111 1095 aa17.76■□□□□ 0.43
CDKN1B-201ENST00000228872 PERM1Q5SV97 790 aa17.76■□□□□ 0.43
CDKN1B-201ENST00000228872 CERCAMQ5T4B2 595 aa17.76■□□□□ 0.43
CDKN1B-201ENST00000228872 PLPPR4Q7Z2D5 763 aa17.76■□□□□ 0.43
CDKN1B-201ENST00000228872 SLC41A1Q8IVJ1 513 aa17.76■□□□□ 0.43
CDKN1B-201ENST00000228872 ARL10Q8N8L6 244 aa17.76■□□□□ 0.43
CDKN1B-201ENST00000228872 SH3YL1Q96HL8 342 aaPredicted RBP17.76■□□□□ 0.43
CDKN1B-201ENST00000228872 FAM167AQ96KS9 214 aa17.76■□□□□ 0.43
CDKN1B-201ENST00000228872 KATNBL1Q9H079 304 aa17.76■□□□□ 0.43
CDKN1B-201ENST00000228872 GBA3Q9H227 469 aa17.76■□□□□ 0.43
CDKN1B-201ENST00000228872 RPF1Q9H9Y2 349 aaKnown RBP17.76■□□□□ 0.43
CDKN1B-201ENST00000228872 PTPRHQ9HD43 1115 aa17.76■□□□□ 0.43
CDKN1B-201ENST00000228872 PDGFCQ9NRA1 345 aa17.76■□□□□ 0.43
CDKN1B-201ENST00000228872 ST14Q9Y5Y6 855 aa17.76■□□□□ 0.43
CDKN1B-201ENST00000228872 CLDN25C9JDP6 229 aa17.76■□□□□ 0.43
CDKN1B-201ENST00000228872 JRKO75564 520 aa17.76■□□□□ 0.43
CDKN1B-201ENST00000228872 OXTRP30559 389 aa17.76■□□□□ 0.43
CDKN1B-201ENST00000228872 HPCAL1P37235 193 aa17.76■□□□□ 0.43
CDKN1B-201ENST00000228872 ATP6V0D1P61421 351 aa17.76■□□□□ 0.43
CDKN1B-201ENST00000228872 PIWIL4Q7Z3Z4 852 aaKnown RBP17.76■□□□□ 0.43
CDKN1B-201ENST00000228872 ADGRG5Q8IZF4 528 aa17.76■□□□□ 0.43
CDKN1B-201ENST00000228872 TXNDC5Q8NBS9 432 aaKnown RBP17.76■□□□□ 0.43
CDKN1B-201ENST00000228872 CENPIQ92674 756 aaPredicted RBP17.76■□□□□ 0.43
CDKN1B-201ENST00000228872 HDAC10Q969S8 669 aa17.76■□□□□ 0.43
CDKN1B-201ENST00000228872 NXNL1Q96CM4 212 aa17.76■□□□□ 0.43
CDKN1B-201ENST00000228872 MYRFLQ96LU7 910 aa17.76■□□□□ 0.43
CDKN1B-201ENST00000228872 GPR78Q96P69 363 aa17.76■□□□□ 0.43
CDKN1B-201ENST00000228872 TPK1Q9H3S4 243 aa17.76■□□□□ 0.43
CDKN1B-201ENST00000228872 RHOJQ9H4E5 214 aa17.76■□□□□ 0.43
CDKN1B-201ENST00000228872 CASS4Q9NQ75 786 aa17.76■□□□□ 0.43
CDKN1B-201ENST00000228872 SLC27A5Q9Y2P5 690 aa17.76■□□□□ 0.43
CDKN1B-201ENST00000228872 MTF2Q9Y483 593 aaPredicted RBP17.76■□□□□ 0.43
CDKN1B-201ENST00000228872 GPC4O75487 556 aa17.75■□□□□ 0.43
CDKN1B-201ENST00000228872 AP2A1O95782 977 aa17.75■□□□□ 0.43
CDKN1B-201ENST00000228872 INCA1Q0VD86 236 aa17.75■□□□□ 0.43
CDKN1B-201ENST00000228872 PIGZQ86VD9 579 aa17.75■□□□□ 0.43
CDKN1B-201ENST00000228872 PSTKQ8IV42 348 aaKnown RBP17.75■□□□□ 0.43
CDKN1B-201ENST00000228872 ZBTB8OSQ8IWT0 167 aa17.75■□□□□ 0.43
CDKN1B-201ENST00000228872 DDIASQ8IXT1 998 aa17.75■□□□□ 0.43
CDKN1B-201ENST00000228872 SPATA6LQ8N4H0 392 aa17.75■□□□□ 0.43
CDKN1B-201ENST00000228872 RNF149Q8NC42 400 aa17.75■□□□□ 0.43
CDKN1B-201ENST00000228872 USP33Q8TEY7 942 aa17.75■□□□□ 0.43
CDKN1B-201ENST00000228872 SPATA33Q96N06 139 aa17.75■□□□□ 0.43
CDKN1B-201ENST00000228872 PRDM12Q9H4Q4 367 aa17.75■□□□□ 0.43
CDKN1B-201ENST00000228872 TNFRSF12AQ9NP84 129 aa17.75■□□□□ 0.43
CDKN1B-201ENST00000228872 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.75■□□□□ 0.43
CDKN1B-201ENST00000228872 EGFL7Q9UHF1 273 aa17.75■□□□□ 0.43
CDKN1B-201ENST00000228872 RPS9P46781 194 aaKnown RBP17.75■□□□□ 0.43
CDKN1B-201ENST00000228872 GSSP48637 474 aa17.75■□□□□ 0.43
CDKN1B-201ENST00000228872 TUBA3CQ13748 450 aa17.75■□□□□ 0.43
CDKN1B-201ENST00000228872 ZNF460Q14592 562 aa17.75■□□□□ 0.43
CDKN1B-201ENST00000228872 ATF7IP2Q5U623 682 aa17.75■□□□□ 0.43
CDKN1B-201ENST00000228872 AGAP7PQ5VUJ5 663 aa17.75■□□□□ 0.43
CDKN1B-201ENST00000228872 GTF2IRD2BQ6EKJ0 949 aa17.75■□□□□ 0.43
CDKN1B-201ENST00000228872 JADE1Q6IE81 842 aa17.75■□□□□ 0.43
CDKN1B-201ENST00000228872 DPP9Q86TI2 863 aa17.75■□□□□ 0.43
CDKN1B-201ENST00000228872 GTF2IRD2Q86UP8 949 aa17.75■□□□□ 0.43
CDKN1B-201ENST00000228872 RETREG3Q86VR2 466 aa17.75■□□□□ 0.43
CDKN1B-201ENST00000228872 IFNL1Q8IU54 200 aa17.75■□□□□ 0.43
CDKN1B-201ENST00000228872 LRRC71Q8N4P6 559 aa17.75■□□□□ 0.43
CDKN1B-201ENST00000228872 ROPN1LQ96C74 230 aa17.75■□□□□ 0.43
CDKN1B-201ENST00000228872 LRCH3Q96II8 777 aa17.75■□□□□ 0.43
CDKN1B-201ENST00000228872 FAR2Q96K12 515 aa17.75■□□□□ 0.43
CDKN1B-201ENST00000228872 LHPPQ9H008 270 aa17.75■□□□□ 0.43
CDKN1B-201ENST00000228872 SMARCAD1Q9H4L7 1026 aa17.75■□□□□ 0.43
CDKN1B-201ENST00000228872 POMKQ9H5K3 350 aa17.75■□□□□ 0.43
CDKN1B-201ENST00000228872 CHRAC1Q9NRG0 131 aa17.75■□□□□ 0.43
CDKN1B-201ENST00000228872 CPA4Q9UI42 421 aa17.75■□□□□ 0.43
CDKN1B-201ENST00000228872 TRAF6Q9Y4K3 522 aa17.75■□□□□ 0.43
CDKN1B-201ENST00000228872 B4GALT5O43286 388 aa17.75■□□□□ 0.43
CDKN1B-201ENST00000228872 B4GAT1O43505 415 aa17.75■□□□□ 0.43
CDKN1B-201ENST00000228872 SNAP29O95721 258 aa17.75■□□□□ 0.43
CDKN1B-201ENST00000228872 PGK1P00558 417 aa17.75■□□□□ 0.43
CDKN1B-201ENST00000228872 EEF1B2P24534 225 aaKnown RBP17.75■□□□□ 0.43
CDKN1B-201ENST00000228872 ATICP31939 592 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms