RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 TM6SF2Q9BZW4 377 aa11.09□□□□□ -0.63
PTP4A1-207ENST00000639568 SIK2Q9H0K1 926 aa11.09□□□□□ -0.63
PTP4A1-207ENST00000639568 TMEM168Q9H0V1 697 aa11.09□□□□□ -0.63
PTP4A1-207ENST00000639568 POPDC2Q9HBU9 364 aa11.09□□□□□ -0.63
PTP4A1-207ENST00000639568 FBXO8Q9NRD0 319 aa11.09□□□□□ -0.63
PTP4A1-207ENST00000639568 DDIT4Q9NX09 232 aa11.09□□□□□ -0.63
PTP4A1-207ENST00000639568 FAM13BQ9NYF5 915 aa11.09□□□□□ -0.63
PTP4A1-207ENST00000639568 RCOR3Q9P2K3 495 aaPredicted RBP11.09□□□□□ -0.63
PTP4A1-207ENST00000639568 MOSPD1Q9UJG1 213 aa11.09□□□□□ -0.63
PTP4A1-207ENST00000639568 HIVEP3Q5T1R4 2406 aa11.08□□□□□ -0.64
PTP4A1-207ENST00000639568 DNHD1Q96M86 4753 aa11.08□□□□□ -0.64
PTP4A1-207ENST00000639568 CCDC168Q8NDH2 2452 aa11.08□□□□□ -0.64
PTP4A1-207ENST00000639568 A8MU76 341 aa11.08□□□□□ -0.64
PTP4A1-207ENST00000639568 CACNB4O00305 520 aaPredicted RBP11.08□□□□□ -0.64
PTP4A1-207ENST00000639568 POLR1CO15160 346 aaPredicted RBP11.08□□□□□ -0.64
PTP4A1-207ENST00000639568 DPM1O60762 260 aa11.08□□□□□ -0.64
PTP4A1-207ENST00000639568 UGT2B4P06133 528 aa11.08□□□□□ -0.64
PTP4A1-207ENST00000639568 XPAP23025 273 aaPredicted RBP11.08□□□□□ -0.64
PTP4A1-207ENST00000639568 KELP23276 732 aa11.08□□□□□ -0.64
PTP4A1-207ENST00000639568 CASP1P29466 404 aa11.08□□□□□ -0.64
PTP4A1-207ENST00000639568 GKP32189 559 aa11.08□□□□□ -0.64
PTP4A1-207ENST00000639568 MXI1P50539 228 aa11.08□□□□□ -0.64
PTP4A1-207ENST00000639568 RNASE9P60153 205 aaKnown RBP11.08□□□□□ -0.64
PTP4A1-207ENST00000639568 YWHAZP63104 245 aaKnown RBP11.08□□□□□ -0.64
PTP4A1-207ENST00000639568 CDK17Q00537 523 aa11.08□□□□□ -0.64
PTP4A1-207ENST00000639568 DNM1Q05193 864 aaKnown RBP11.08□□□□□ -0.64
PTP4A1-207ENST00000639568 SEMA5AQ13591 1074 aa11.08□□□□□ -0.64
PTP4A1-207ENST00000639568 CUL2Q13617 745 aa11.08□□□□□ -0.64
PTP4A1-207ENST00000639568 MAP7Q14244 749 aa11.08□□□□□ -0.64
PTP4A1-207ENST00000639568 NR1D2Q14995 579 aa11.08□□□□□ -0.64
PTP4A1-207ENST00000639568 STILQ15468 1287 aa11.08□□□□□ -0.64
PTP4A1-207ENST00000639568 CNGA2Q16280 664 aa11.08□□□□□ -0.64
PTP4A1-207ENST00000639568 WSCD2Q2TBF2 565 aa11.08□□□□□ -0.64
PTP4A1-207ENST00000639568 TMEM71Q6P5X7 295 aa11.08□□□□□ -0.64
PTP4A1-207ENST00000639568 NYAP1Q6ZVC0 841 aa11.08□□□□□ -0.64
PTP4A1-207ENST00000639568 GDF7Q7Z4P5 450 aa11.08□□□□□ -0.64
PTP4A1-207ENST00000639568 FAM186BQ8IYM0 893 aa11.08□□□□□ -0.64
PTP4A1-207ENST00000639568 OR6K2Q8NGY2 324 aa11.08□□□□□ -0.64
PTP4A1-207ENST00000639568 ZDHHC1Q8WTX9 485 aa11.08□□□□□ -0.64
PTP4A1-207ENST00000639568 OR1E3Q8WZA6 343 aa11.08□□□□□ -0.64
PTP4A1-207ENST00000639568 KLHL32Q96NJ5 620 aa11.08□□□□□ -0.64
PTP4A1-207ENST00000639568 OSBPL1AQ9BXW6 950 aa11.08□□□□□ -0.64
PTP4A1-207ENST00000639568 ULBP3Q9BZM4 244 aa11.08□□□□□ -0.64
PTP4A1-207ENST00000639568 KCTD10Q9H3F6 313 aa11.08□□□□□ -0.64
PTP4A1-207ENST00000639568 MAGEF1Q9HAY2 307 aa11.08□□□□□ -0.64
PTP4A1-207ENST00000639568 TMEM9Q9P0T7 183 aa11.08□□□□□ -0.64
PTP4A1-207ENST00000639568 CROTQ9UKG9 612 aa11.08□□□□□ -0.64
PTP4A1-207ENST00000639568 G3BP2Q9UN86 482 aaKnown RBP11.08□□□□□ -0.64
PTP4A1-207ENST00000639568 FCF1Q9Y324 198 aaKnown RBP11.08□□□□□ -0.64
PTP4A1-207ENST00000639568 ZNF451Q9Y4E5 1061 aa11.08□□□□□ -0.64
PTP4A1-207ENST00000639568 PCDHGA9Q9Y5G4 932 aaKnown RBP11.08□□□□□ -0.64
PTP4A1-207ENST00000639568 IGHV1OR21-1A0A087WYE8 117 aa11.07□□□□□ -0.64
PTP4A1-207ENST00000639568 PRSS44E7EML9 344 aa11.07□□□□□ -0.64
PTP4A1-207ENST00000639568 KRT86O43790 486 aa11.07□□□□□ -0.64
PTP4A1-207ENST00000639568 STX10O60499 249 aa11.07□□□□□ -0.64
PTP4A1-207ENST00000639568 ECEL1O95672 775 aa11.07□□□□□ -0.64
PTP4A1-207ENST00000639568 IGLV3-25P01717 112 aa11.07□□□□□ -0.64
PTP4A1-207ENST00000639568 PCCBP05166 539 aa11.07□□□□□ -0.64
PTP4A1-207ENST00000639568 PAEPP09466 180 aa11.07□□□□□ -0.64
PTP4A1-207ENST00000639568 NR2F2P24468 414 aa11.07□□□□□ -0.64
PTP4A1-207ENST00000639568 OR1E1P30953 314 aa11.07□□□□□ -0.64
PTP4A1-207ENST00000639568 CASP14P31944 242 aa11.07□□□□□ -0.64
PTP4A1-207ENST00000639568 PSMC2P35998 433 aaKnown RBP11.07□□□□□ -0.64
PTP4A1-207ENST00000639568 GGCXP38435 758 aa11.07□□□□□ -0.64
PTP4A1-207ENST00000639568 ACADSBP45954 432 aa11.07□□□□□ -0.64
PTP4A1-207ENST00000639568 CCL11P51671 97 aa11.07□□□□□ -0.64
PTP4A1-207ENST00000639568 ENPEPQ07075 957 aa11.07□□□□□ -0.64
PTP4A1-207ENST00000639568 SQSTM1Q13501 440 aa11.07□□□□□ -0.64
PTP4A1-207ENST00000639568 POLD3Q15054 466 aaPredicted RBP11.07□□□□□ -0.64
PTP4A1-207ENST00000639568 TSR1Q2NL82 804 aaKnown RBP11.07□□□□□ -0.64
PTP4A1-207ENST00000639568 KCTD16Q68DU8 428 aa11.07□□□□□ -0.64
PTP4A1-207ENST00000639568 FOXR2Q6PJQ5 311 aa11.07□□□□□ -0.64
PTP4A1-207ENST00000639568 C6orf15Q6UXA7 325 aaPredicted RBP11.07□□□□□ -0.64
PTP4A1-207ENST00000639568 LYSMD3Q7Z3D4 306 aa11.07□□□□□ -0.64
PTP4A1-207ENST00000639568 CCL4L1Q8NHW4 92 aa11.07□□□□□ -0.64
PTP4A1-207ENST00000639568 TFAP2BQ92481 460 aa11.07□□□□□ -0.64
PTP4A1-207ENST00000639568 MED15Q96RN5 788 aa11.07□□□□□ -0.64
PTP4A1-207ENST00000639568 TRIM55Q9BYV6 548 aa11.07□□□□□ -0.64
PTP4A1-207ENST00000639568 ACSS2Q9NR19 701 aa11.07□□□□□ -0.64
PTP4A1-207ENST00000639568 SPATS2LQ9NUQ6 558 aaKnown RBP11.07□□□□□ -0.64
PTP4A1-207ENST00000639568 EXOC1Q9NV70 894 aa11.07□□□□□ -0.64
PTP4A1-207ENST00000639568 HS3ST4Q9Y661 456 aa11.07□□□□□ -0.64
PTP4A1-207ENST00000639568 NAV3Q8IVL0 2385 aa11.06□□□□□ -0.64
PTP4A1-207ENST00000639568 TMEM202A6NGA9 273 aa11.06□□□□□ -0.64
PTP4A1-207ENST00000639568 PAGE1O75459 146 aa11.06□□□□□ -0.64
PTP4A1-207ENST00000639568 CREG1O75629 220 aa11.06□□□□□ -0.64
PTP4A1-207ENST00000639568 RHOBTB3O94955 611 aa11.06□□□□□ -0.64
PTP4A1-207ENST00000639568 POP4O95707 220 aaKnown RBP11.06□□□□□ -0.64
PTP4A1-207ENST00000639568 DLGAP3O95886 979 aa11.06□□□□□ -0.64
PTP4A1-207ENST00000639568 RECKO95980 971 aa11.06□□□□□ -0.64
PTP4A1-207ENST00000639568 FGF1P05230 155 aa11.06□□□□□ -0.64
PTP4A1-207ENST00000639568 CSF2RBP32927 897 aa11.06□□□□□ -0.64
PTP4A1-207ENST00000639568 PITX1P78337 314 aaPredicted RBP11.06□□□□□ -0.64
PTP4A1-207ENST00000639568 GPLD1P80108 840 aa11.06□□□□□ -0.64
PTP4A1-207ENST00000639568 DPYDQ12882 1025 aa11.06□□□□□ -0.64
PTP4A1-207ENST00000639568 ILF3Q12906 894 aaKnown RBP eCLIP11.06□□□□□ -0.641e-6■■■□□ 18.6
PTP4A1-207ENST00000639568 STK4Q13043 487 aa11.06□□□□□ -0.64
PTP4A1-207ENST00000639568 NME3Q13232 169 aa11.06□□□□□ -0.64
PTP4A1-207ENST00000639568 MTM1Q13496 603 aa11.06□□□□□ -0.64
PTP4A1-207ENST00000639568 PEX6Q13608 980 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms