RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 MKS1Q9NXB0 559 aa14.71□□□□□ -0.05
VPS36-207ENST00000611132 IGSF9Q9P2J2 1179 aa14.71□□□□□ -0.05
VPS36-207ENST00000611132 CNOT6Q9ULM6 557 aaKnown RBP14.71□□□□□ -0.05
VPS36-207ENST00000611132 TBC1D30Q9Y2I9 924 aa14.71□□□□□ -0.05
VPS36-207ENST00000611132 COPG1Q9Y678 874 aaKnown RBP14.71□□□□□ -0.05
VPS36-207ENST00000611132 C5orf58C9J3I9 102 aa14.71□□□□□ -0.06
VPS36-207ENST00000611132 MT-ND1P03886 318 aa14.71□□□□□ -0.06
VPS36-207ENST00000611132 PTPN1P18031 435 aaKnown RBP14.71□□□□□ -0.06
VPS36-207ENST00000611132 ADRA1BP35368 520 aa14.71□□□□□ -0.06
VPS36-207ENST00000611132 MRPS5P82675 430 aaKnown RBP14.71□□□□□ -0.06
VPS36-207ENST00000611132 IRF9Q00978 393 aa14.71□□□□□ -0.06
VPS36-207ENST00000611132 TTLL9Q3SXZ7 439 aa14.71□□□□□ -0.06
VPS36-207ENST00000611132 DQX1Q8TE96 717 aaKnown RBP14.71□□□□□ -0.06
VPS36-207ENST00000611132 CANT1Q8WVQ1 401 aa14.71□□□□□ -0.06
VPS36-207ENST00000611132 NIFKQ9BYG3 293 aaKnown RBP14.71□□□□□ -0.06
VPS36-207ENST00000611132 NUDT5Q9UKK9 219 aa14.71□□□□□ -0.06
VPS36-207ENST00000611132 RBMX2Q9Y388 322 aaKnown RBP14.71□□□□□ -0.06
VPS36-207ENST00000611132 GPC6Q9Y625 555 aaPredicted RBP14.71□□□□□ -0.06
VPS36-207ENST00000611132 LOC100506127A0A0U1RQW1 187 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 RECQL4O94761 1208 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 PIGRP01833 764 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 DHRS4L1P0CG22 281 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 DGKZQ13574 1117 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 RFX4Q33E94 735 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 SCIMPQ6UWF3 145 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 PYROXD2Q8N2H3 581 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 CCDC185Q8N715 623 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 ZNF540Q8NDQ6 660 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 UTP15Q8TED0 518 aaKnown RBP14.7□□□□□ -0.06
VPS36-207ENST00000611132 TAMM41Q96BW9 452 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 NUAK2Q9H093 628 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 RNF19AQ9NV58 838 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 SUCOQ9UBS9 1254 aaKnown RBP14.7□□□□□ -0.06
VPS36-207ENST00000611132 PHF24Q9UPV7 400 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 DENRO43583 198 aaKnown RBP14.7□□□□□ -0.06
VPS36-207ENST00000611132 IDH3BO43837 385 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 DNAJA2O60884 412 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 UMPSP11172 480 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 ETV4P43268 484 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 BNIP3Q12983 259 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 C10orf120Q5SQS8 335 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 FAM91A1Q658Y4 838 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 RRM2BQ7LG56 351 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 CAND1Q86VP6 1230 aaKnown RBP14.7□□□□□ -0.06
VPS36-207ENST00000611132 MIB1Q86YT6 1006 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 CPSF7Q8N684 471 aaKnown RBP14.7□□□□□ -0.06
VPS36-207ENST00000611132 TOP1MTQ969P6 601 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 C12orf43Q96C57 262 aaKnown RBP14.7□□□□□ -0.06
VPS36-207ENST00000611132 MTERF3Q96E29 417 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 EPB41L1Q9H4G0 881 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 NR2E3Q9Y5X4 410 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 MRPL42Q9Y6G3 142 aaKnown RBP14.7□□□□□ -0.06
VPS36-207ENST00000611132 SNPHO15079 494 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 SLC22A3O75751 556 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 THRBP10828 461 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 CYP2C18P33260 490 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 KRT20P35900 424 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 NUMBP49757 651 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 ZNF829Q3KNS6 432 aaPredicted RBP14.7□□□□□ -0.06
VPS36-207ENST00000611132 SH3D19Q5HYK7 790 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 PACRGLQ8N7B6 248 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 KLHL3Q9UH77 587 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 TMA7Q9Y2S6 64 aaKnown RBP14.7□□□□□ -0.06
VPS36-207ENST00000611132 GMPPBQ9Y5P6 360 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 CHD4Q14839 1912 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 MYOCOSA0A1B0GUC4 107 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 GRIN3BO60391 1043 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 ZNF286BP0CG31 522 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 NR4A1P22736 598 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 MPP1Q00013 466 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 DPYSL2Q16555 572 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 CLEC6AQ6EIG7 209 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 GLYATQ6IB77 296 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 MILR1Q7Z6M3 343 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 AKAP14Q86UN6 197 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 GPSM1Q86YR5 675 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 B3GALNT2Q8NCR0 500 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 ABI2Q9NYB9 513 aaPredicted RBP14.7□□□□□ -0.06
VPS36-207ENST00000611132 PADI4Q9UM07 663 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 CNTN6Q9UQ52 1028 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 RIPK3Q9Y572 518 aa14.7□□□□□ -0.06
VPS36-207ENST00000611132 G3V2T6 193 aa14.69□□□□□ -0.06
VPS36-207ENST00000611132 SEC22BO75396 215 aa14.69□□□□□ -0.06
VPS36-207ENST00000611132 MLYCDO95822 493 aa14.69□□□□□ -0.06
VPS36-207ENST00000611132 CTSHP09668 335 aa14.69□□□□□ -0.06
VPS36-207ENST00000611132 DBTP11182 482 aaKnown RBP14.69□□□□□ -0.06
VPS36-207ENST00000611132 FMO4P31512 558 aa14.69□□□□□ -0.06
VPS36-207ENST00000611132 OGFRL1Q5TC84 451 aaPredicted RBP14.69□□□□□ -0.06
VPS36-207ENST00000611132 PAOXQ6QHF9 649 aa14.69□□□□□ -0.06
VPS36-207ENST00000611132 SLC51AQ86UW1 340 aa14.69□□□□□ -0.06
VPS36-207ENST00000611132 DCP1BQ8IZD4 617 aaKnown RBP14.69□□□□□ -0.06
VPS36-207ENST00000611132 TTC30BQ8N4P2 665 aa14.69□□□□□ -0.06
VPS36-207ENST00000611132 MCFD2Q8NI22 146 aa14.69□□□□□ -0.06
VPS36-207ENST00000611132 SMARCD1Q96GM5 515 aa14.69□□□□□ -0.06
VPS36-207ENST00000611132 CLPBQ9H078 707 aa14.69□□□□□ -0.06
VPS36-207ENST00000611132 ZNF696Q9H7X3 374 aa14.69□□□□□ -0.06
VPS36-207ENST00000611132 ACTR8Q9H981 624 aa14.69□□□□□ -0.06
VPS36-207ENST00000611132 CACNA2D2Q9NY47 1150 aa14.69□□□□□ -0.06
VPS36-207ENST00000611132 PTBP2Q9UKA9 531 aaKnown RBP14.69□□□□□ -0.06
VPS36-207ENST00000611132 LAMB4A4D0S4 1761 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms