RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 C1QTNF9BB2RNN3 333 aa22.47■■□□□ 1.19
GTF2F1-204ENST00000594965 ENC1O14682 589 aa22.47■■□□□ 1.19
GTF2F1-204ENST00000594965 PIAS2O75928 621 aa22.47■■□□□ 1.19
GTF2F1-204ENST00000594965 LDOC1O95751 146 aaPredicted RBP22.47■■□□□ 1.19
GTF2F1-204ENST00000594965 C1QTNF9P0C862 333 aa22.47■■□□□ 1.19
GTF2F1-204ENST00000594965 MAGEA1P43355 309 aa22.47■■□□□ 1.19
GTF2F1-204ENST00000594965 LIG3P49916 1009 aa22.47■■□□□ 1.19
GTF2F1-204ENST00000594965 GBE1Q04446 702 aa22.47■■□□□ 1.19
GTF2F1-204ENST00000594965 DNAJC3Q13217 504 aa22.47■■□□□ 1.19
GTF2F1-204ENST00000594965 PDE1CQ14123 709 aaPredicted RBP22.47■■□□□ 1.19
GTF2F1-204ENST00000594965 ERAP2Q6P179 960 aa22.47■■□□□ 1.19
GTF2F1-204ENST00000594965 SPOCK2Q92563 424 aa22.47■■□□□ 1.19
GTF2F1-204ENST00000594965 MAML1Q92585 1016 aa22.47■■□□□ 1.19
GTF2F1-204ENST00000594965 RNF157Q96PX1 679 aa22.47■■□□□ 1.19
GTF2F1-204ENST00000594965 SCUBE2Q9NQ36 999 aa22.47■■□□□ 1.19
GTF2F1-204ENST00000594965 TFR2Q9UP52 801 aa22.47■■□□□ 1.19
GTF2F1-204ENST00000594965 HYOU1Q9Y4L1 999 aa22.47■■□□□ 1.19
GTF2F1-204ENST00000594965 PCDHGC4Q9Y5F7 938 aa22.47■■□□□ 1.19
GTF2F1-204ENST00000594965 TRIM38O00635 465 aa22.46■■□□□ 1.19
GTF2F1-204ENST00000594965 TRAF2Q12933 501 aa22.46■■□□□ 1.19
GTF2F1-204ENST00000594965 EIF2B5Q13144 721 aaKnown RBP22.46■■□□□ 1.19
GTF2F1-204ENST00000594965 AGERQ15109 404 aa22.46■■□□□ 1.19
GTF2F1-204ENST00000594965 IRF4Q15306 451 aa22.46■■□□□ 1.19
GTF2F1-204ENST00000594965 WSCD2Q2TBF2 565 aa22.46■■□□□ 1.19
GTF2F1-204ENST00000594965 BBS5Q8N3I7 341 aa22.46■■□□□ 1.19
GTF2F1-204ENST00000594965 NSMCE1Q8WV22 266 aa22.46■■□□□ 1.19
GTF2F1-204ENST00000594965 TSGA13Q96PP4 275 aa22.46■■□□□ 1.19
GTF2F1-204ENST00000594965 NT5MQ9NPB1 228 aa22.46■■□□□ 1.19
GTF2F1-204ENST00000594965 DNAJC28Q9NX36 388 aa22.46■■□□□ 1.19
GTF2F1-204ENST00000594965 PNMA8BQ9ULN7 279 aaPredicted RBP22.46■■□□□ 1.19
GTF2F1-204ENST00000594965 TPRP12270 2363 aaKnown RBP22.46■■□□□ 1.19
GTF2F1-204ENST00000594965 MYLKQ15746 1914 aa22.45■■□□□ 1.18
GTF2F1-204ENST00000594965 LRRD1A4D1F6 860 aa22.45■■□□□ 1.18
GTF2F1-204ENST00000594965 CSF2P04141 144 aa22.45■■□□□ 1.18
GTF2F1-204ENST00000594965 NME1P15531 152 aaKnown RBP22.45■■□□□ 1.18
GTF2F1-204ENST00000594965 GM2AP17900 193 aa22.45■■□□□ 1.18
GTF2F1-204ENST00000594965 POLR2LP62875 67 aaKnown RBP22.45■■□□□ 1.18
GTF2F1-204ENST00000594965 IHHQ14623 411 aa22.45■■□□□ 1.18
GTF2F1-204ENST00000594965 IFI16Q16666 785 aaKnown RBP22.45■■□□□ 1.18
GTF2F1-204ENST00000594965 RALGPS1Q5JS13 557 aa22.45■■□□□ 1.18
GTF2F1-204ENST00000594965 ZFYVE27Q5T4F4 411 aa22.45■■□□□ 1.18
GTF2F1-204ENST00000594965 LIPIQ6XZB0 460 aa22.45■■□□□ 1.18
GTF2F1-204ENST00000594965 DPPA4Q7L190 304 aa22.45■■□□□ 1.18
GTF2F1-204ENST00000594965 PARGQ86W56 976 aa22.45■■□□□ 1.18
GTF2F1-204ENST00000594965 PLD5Q8N7P1 536 aa22.45■■□□□ 1.18
GTF2F1-204ENST00000594965 FATE1Q969F0 183 aa22.45■■□□□ 1.18
GTF2F1-204ENST00000594965 C1QTNF7Q9BXJ2 289 aa22.45■■□□□ 1.18
GTF2F1-204ENST00000594965 DTLQ9NZJ0 730 aa22.45■■□□□ 1.18
GTF2F1-204ENST00000594965 ACACBO00763 2458 aa22.45■■□□□ 1.18
GTF2F1-204ENST00000594965 CFAP69A5D8W1 941 aa22.44■■□□□ 1.18
GTF2F1-204ENST00000594965 ZNF487B1APH4 448 aa22.44■■□□□ 1.18
GTF2F1-204ENST00000594965 MATN3O15232 486 aa22.44■■□□□ 1.18
GTF2F1-204ENST00000594965 SOCS5O75159 536 aa22.44■■□□□ 1.18
GTF2F1-204ENST00000594965 COMTP21964 271 aa22.44■■□□□ 1.18
GTF2F1-204ENST00000594965 FECHP22830 423 aa22.44■■□□□ 1.18
GTF2F1-204ENST00000594965 CCNCP24863 283 aa22.44■■□□□ 1.18
GTF2F1-204ENST00000594965 SLC1A1P43005 524 aa22.44■■□□□ 1.18
GTF2F1-204ENST00000594965 ACADVLP49748 655 aa22.44■■□□□ 1.18
GTF2F1-204ENST00000594965 HADHBP55084 474 aaKnown RBP22.44■■□□□ 1.18
GTF2F1-204ENST00000594965 YPEL5P62699 121 aa22.44■■□□□ 1.18
GTF2F1-204ENST00000594965 LRRC14Q15048 493 aa22.44■■□□□ 1.18
GTF2F1-204ENST00000594965 PROX2Q3B8N5 592 aa22.44■■□□□ 1.18
GTF2F1-204ENST00000594965 LRRC38Q5VT99 294 aa22.44■■□□□ 1.18
GTF2F1-204ENST00000594965 UNQ6494/PRO21346Q6UXR6 183 aa22.44■■□□□ 1.18
GTF2F1-204ENST00000594965 TMPRSS7Q7RTY8 843 aa22.44■■□□□ 1.18
GTF2F1-204ENST00000594965 VSIG1Q86XK7 387 aa22.44■■□□□ 1.18
GTF2F1-204ENST00000594965 CCDC170Q8IYT3 715 aa22.44■■□□□ 1.18
GTF2F1-204ENST00000594965 PCDHA13Q9Y5I0 950 aa22.44■■□□□ 1.18
GTF2F1-204ENST00000594965 MAP1BP46821 2468 aaKnown RBP22.43■■□□□ 1.18
GTF2F1-204ENST00000594965 A8MX80 341 aa22.43■■□□□ 1.18
GTF2F1-204ENST00000594965 SIGLEC6O43699 453 aa22.43■■□□□ 1.18
GTF2F1-204ENST00000594965 ZNF211Q13398 564 aaPredicted RBP22.43■■□□□ 1.18
GTF2F1-204ENST00000594965 SLC9A4Q6AI14 798 aa22.43■■□□□ 1.18
GTF2F1-204ENST00000594965 ALG1LQ6GMV1 187 aa22.43■■□□□ 1.18
GTF2F1-204ENST00000594965 TIGD7Q6NT04 549 aaPredicted RBP22.43■■□□□ 1.18
GTF2F1-204ENST00000594965 OR4C6Q8NH72 309 aa22.43■■□□□ 1.18
GTF2F1-204ENST00000594965 HDAC11Q96DB2 347 aa22.43■■□□□ 1.18
GTF2F1-204ENST00000594965 PANX2Q96RD6 677 aa22.43■■□□□ 1.18
GTF2F1-204ENST00000594965 SEMA3CQ99985 751 aa22.43■■□□□ 1.18
GTF2F1-204ENST00000594965 B4GALT6Q9UBX8 382 aa22.43■■□□□ 1.18
GTF2F1-204ENST00000594965 AKAP13Q12802 2813 aa22.43■■□□□ 1.18
GTF2F1-204ENST00000594965 CHD8Q9HCK8 2581 aa22.43■■□□□ 1.18
GTF2F1-204ENST00000594965 SOWAHDA6NJG2 315 aa22.42■■□□□ 1.18
GTF2F1-204ENST00000594965 TOR1BO14657 336 aa22.42■■□□□ 1.18
GTF2F1-204ENST00000594965 FFAR2O15552 330 aa22.42■■□□□ 1.18
GTF2F1-204ENST00000594965 LZTS3O60299 673 aaPredicted RBP22.42■■□□□ 1.18
GTF2F1-204ENST00000594965 PROS1P07225 676 aa22.42■■□□□ 1.18
GTF2F1-204ENST00000594965 HNRNPKP61978 463 aaKnown RBP eCLIP22.42■■□□□ 1.18
GTF2F1-204ENST00000594965 PTK2BQ14289 1009 aa22.42■■□□□ 1.18
GTF2F1-204ENST00000594965 CCDC157Q569K6 752 aa22.42■■□□□ 1.18
GTF2F1-204ENST00000594965 DHRS13Q6UX07 377 aa22.42■■□□□ 1.18
GTF2F1-204ENST00000594965 CCNI2Q6ZMN8 369 aaPredicted RBP22.42■■□□□ 1.18
GTF2F1-204ENST00000594965 RHOT1Q8IXI2 618 aa22.42■■□□□ 1.18
GTF2F1-204ENST00000594965 ZNF548Q8NEK5 533 aaPredicted RBP22.42■■□□□ 1.18
GTF2F1-204ENST00000594965 PDCD6IPQ8WUM4 868 aaKnown RBP22.42■■□□□ 1.18
GTF2F1-204ENST00000594965 RNF25Q96BH1 459 aaPredicted RBP22.42■■□□□ 1.18
GTF2F1-204ENST00000594965 TCEAL2Q9H3H9 227 aaPredicted RBP22.42■■□□□ 1.18
GTF2F1-204ENST00000594965 GOLPH3Q9H4A6 298 aa22.42■■□□□ 1.18
GTF2F1-204ENST00000594965 RBM22Q9NW64 420 aaKnown RBP eCLIP22.42■■□□□ 1.18
GTF2F1-204ENST00000594965 PCDHGA1Q9Y5H4 931 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms