RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 KDELR3O43731 214 aa17.74■□□□□ 0.43
SHKBP1-203ENST00000594298 UGT2B4P06133 528 aa17.74■□□□□ 0.43
SHKBP1-203ENST00000594298 PCK1P35558 622 aa17.74■□□□□ 0.43
SHKBP1-203ENST00000594298 RPIAP49247 311 aa17.74■□□□□ 0.43
SHKBP1-203ENST00000594298 ZNF135P52742 658 aaPredicted RBP17.74■□□□□ 0.43
SHKBP1-203ENST00000594298 SKOR1P84550 965 aa17.74■□□□□ 0.43
SHKBP1-203ENST00000594298 ERMARDQ5T6L9 678 aa17.74■□□□□ 0.43
SHKBP1-203ENST00000594298 FAM72AQ5TYM5 149 aa17.74■□□□□ 0.43
SHKBP1-203ENST00000594298 FAM72DQ6L9T8 149 aa17.74■□□□□ 0.43
SHKBP1-203ENST00000594298 RBM44Q6ZP01 1051 aaKnown RBP17.74■□□□□ 0.43
SHKBP1-203ENST00000594298 FAM72BQ86X60 149 aa17.74■□□□□ 0.43
SHKBP1-203ENST00000594298 GLMNQ92990 594 aa17.74■□□□□ 0.43
SHKBP1-203ENST00000594298 SLC46A1Q96NT5 459 aa17.74■□□□□ 0.43
SHKBP1-203ENST00000594298 CHP1Q99653 195 aa17.74■□□□□ 0.43
SHKBP1-203ENST00000594298 CATSPERBQ9H7T0 1116 aa17.74■□□□□ 0.43
SHKBP1-203ENST00000594298 CTTNBP2NLQ9P2B4 639 aa17.74■□□□□ 0.43
SHKBP1-203ENST00000594298 UVRAGQ9P2Y5 699 aa17.74■□□□□ 0.43
SHKBP1-203ENST00000594298 APOBEC3BQ9UH17 382 aaKnown RBP17.74■□□□□ 0.43
SHKBP1-203ENST00000594298 NENFQ9UMX5 172 aa17.74■□□□□ 0.43
SHKBP1-203ENST00000594298 SATB2Q9UPW6 733 aa17.74■□□□□ 0.43
SHKBP1-203ENST00000594298 ENTPD2Q9Y5L3 495 aa17.74■□□□□ 0.43
SHKBP1-203ENST00000594298 DOCK4Q8N1I0 1966 aa17.73■□□□□ 0.43
SHKBP1-203ENST00000594298 GCN1Q92616 2671 aaKnown RBP17.73■□□□□ 0.43
SHKBP1-203ENST00000594298 A0A1W2PNU3 283 aaPredicted RBP17.73■□□□□ 0.43
SHKBP1-203ENST00000594298 LMO7DNF2Z398 122 aa17.73■□□□□ 0.43
SHKBP1-203ENST00000594298 GCATO75600 419 aa17.73■□□□□ 0.43
SHKBP1-203ENST00000594298 PLA2G2AP14555 144 aa17.73■□□□□ 0.43
SHKBP1-203ENST00000594298 EPHB2P29323 1055 aa17.73■□□□□ 0.43
SHKBP1-203ENST00000594298 MIPP30301 263 aa17.73■□□□□ 0.43
SHKBP1-203ENST00000594298 IGFALSP35858 605 aa17.73■□□□□ 0.43
SHKBP1-203ENST00000594298 THOP1P52888 689 aa17.73■□□□□ 0.43
SHKBP1-203ENST00000594298 CFHR1Q03591 330 aa17.73■□□□□ 0.43
SHKBP1-203ENST00000594298 BOLA3Q53S33 107 aa17.73■□□□□ 0.43
SHKBP1-203ENST00000594298 PRRT3Q5FWE3 981 aa17.73■□□□□ 0.43
SHKBP1-203ENST00000594298 C6orf132Q5T0Z8 1188 aa17.73■□□□□ 0.43
SHKBP1-203ENST00000594298 GDPD4Q6W3E5 623 aa17.73■□□□□ 0.43
SHKBP1-203ENST00000594298 TTC7BQ86TV6 843 aa17.73■□□□□ 0.43
SHKBP1-203ENST00000594298 PHACTR4Q8IZ21 702 aa17.73■□□□□ 0.43
SHKBP1-203ENST00000594298 RBFAQ8N0V3 343 aa17.73■□□□□ 0.43
SHKBP1-203ENST00000594298 WDR48Q8TAF3 677 aa17.73■□□□□ 0.43
SHKBP1-203ENST00000594298 CASKIN2Q8WXE0 1202 aa17.73■□□□□ 0.43
SHKBP1-203ENST00000594298 NAT6Q93015 286 aa17.73■□□□□ 0.43
SHKBP1-203ENST00000594298 ATXN7L3BQ96GX2 97 aa17.73■□□□□ 0.43
SHKBP1-203ENST00000594298 PRR11Q96HE9 360 aaPredicted RBP17.73■□□□□ 0.43
SHKBP1-203ENST00000594298 GDAP1L1Q96MZ0 367 aa17.73■□□□□ 0.43
SHKBP1-203ENST00000594298 KLHL32Q96NJ5 620 aa17.73■□□□□ 0.43
SHKBP1-203ENST00000594298 C1QTNF7Q9BXJ2 289 aa17.73■□□□□ 0.43
SHKBP1-203ENST00000594298 CPNE5Q9HCH3 593 aa17.73■□□□□ 0.43
SHKBP1-203ENST00000594298 PCSK1NQ9UHG2 260 aa17.73■□□□□ 0.43
SHKBP1-203ENST00000594298 ANAPC7Q9UJX3 599 aa17.73■□□□□ 0.43
SHKBP1-203ENST00000594298 PNMA8BQ9ULN7 279 aaPredicted RBP17.73■□□□□ 0.43
SHKBP1-203ENST00000594298 AP4E1Q9UPM8 1137 aa17.73■□□□□ 0.43
SHKBP1-203ENST00000594298 MFHAS1Q9Y4C4 1052 aa17.73■□□□□ 0.43
SHKBP1-203ENST00000594298 FGF10O15520 208 aaPredicted RBP17.72■□□□□ 0.43
SHKBP1-203ENST00000594298 KLK10O43240 276 aa17.72■□□□□ 0.43
SHKBP1-203ENST00000594298 CREB3O43889 395 aa17.72■□□□□ 0.43
SHKBP1-203ENST00000594298 LRCH4O75427 683 aa17.72■□□□□ 0.43
SHKBP1-203ENST00000594298 TM7SF2O76062 418 aa17.72■□□□□ 0.43
SHKBP1-203ENST00000594298 TMEM253P0C7T8 217 aa17.72■□□□□ 0.43
SHKBP1-203ENST00000594298 RBMS1P29558 406 aaKnown RBP17.72■□□□□ 0.43
SHKBP1-203ENST00000594298 MLLT3P42568 568 aaPredicted RBP17.72■□□□□ 0.43
SHKBP1-203ENST00000594298 RAD51Q06609 339 aa17.72■□□□□ 0.43
SHKBP1-203ENST00000594298 INO80DQ53TQ3 878 aaPredicted RBP17.72■□□□□ 0.43
SHKBP1-203ENST00000594298 C3orf38Q5JPI3 329 aa17.72■□□□□ 0.43
SHKBP1-203ENST00000594298 PERM1Q5SV97 790 aa17.72■□□□□ 0.43
SHKBP1-203ENST00000594298 MACC1Q6ZN28 852 aa17.72■□□□□ 0.43
SHKBP1-203ENST00000594298 ZNF605Q86T29 641 aa17.72■□□□□ 0.43
SHKBP1-203ENST00000594298 SLC35F3Q8IY50 421 aa17.72■□□□□ 0.43
SHKBP1-203ENST00000594298 NIPA2Q8N8Q9 360 aa17.72■□□□□ 0.43
SHKBP1-203ENST00000594298 TC2NQ8N9U0 490 aa17.72■□□□□ 0.43
SHKBP1-203ENST00000594298 ZNF564Q8TBZ8 553 aaPredicted RBP17.72■□□□□ 0.43
SHKBP1-203ENST00000594298 CCDC97Q96F63 343 aaPredicted RBP17.72■□□□□ 0.43
SHKBP1-203ENST00000594298 LRRC61Q9BV99 259 aa17.72■□□□□ 0.43
SHKBP1-203ENST00000594298 MAGEB5Q9BZ81 275 aa17.72■□□□□ 0.43
SHKBP1-203ENST00000594298 SLC13A1Q9BZW2 595 aa17.72■□□□□ 0.43
SHKBP1-203ENST00000594298 TRIM7Q9C029 511 aa17.72■□□□□ 0.43
SHKBP1-203ENST00000594298 TCEAL2Q9H3H9 227 aaPredicted RBP17.72■□□□□ 0.43
SHKBP1-203ENST00000594298 DHX35Q9H5Z1 703 aaKnown RBP17.72■□□□□ 0.43
SHKBP1-203ENST00000594298 DKK3Q9UBP4 350 aa17.72■□□□□ 0.43
SHKBP1-203ENST00000594298 TRPM6Q9BX84 2022 aa17.72■□□□□ 0.43
SHKBP1-203ENST00000594298 SHROOM3Q8TF72 1996 aa17.71■□□□□ 0.43
SHKBP1-203ENST00000594298 CDRT15L2A8MXV6 281 aa17.71■□□□□ 0.43
SHKBP1-203ENST00000594298 DAPK3O43293 454 aa17.71■□□□□ 0.43
SHKBP1-203ENST00000594298 MMP20O60882 483 aa17.71■□□□□ 0.43
SHKBP1-203ENST00000594298 TMCC1O94876 653 aa17.71■□□□□ 0.43
SHKBP1-203ENST00000594298 ANXA6P08133 673 aa17.71■□□□□ 0.43
SHKBP1-203ENST00000594298 SUOXP51687 545 aa17.71■□□□□ 0.43
SHKBP1-203ENST00000594298 TPI1P60174 286 aa17.71■□□□□ 0.43
SHKBP1-203ENST00000594298 VAC14Q08AM6 782 aa17.71■□□□□ 0.43
SHKBP1-203ENST00000594298 HADHQ16836 314 aaKnown RBP17.71■□□□□ 0.43
SHKBP1-203ENST00000594298 TAF1BQ53T94 588 aaPredicted RBP17.71■□□□□ 0.43
SHKBP1-203ENST00000594298 ATXN7L2Q5T6C5 722 aaPredicted RBP17.71■□□□□ 0.43
SHKBP1-203ENST00000594298 ARHGAP40Q5TG30 622 aa17.71■□□□□ 0.43
SHKBP1-203ENST00000594298 LEKR1Q6ZMV7 388 aa17.71■□□□□ 0.43
SHKBP1-203ENST00000594298 PYROXD2Q8N2H3 581 aa17.71■□□□□ 0.43
SHKBP1-203ENST00000594298 ARFGAP1Q8N6T3 406 aa17.71■□□□□ 0.43
SHKBP1-203ENST00000594298 RTL3Q8N8U3 475 aaKnown RBP17.71■□□□□ 0.43
SHKBP1-203ENST00000594298 TP53I13Q8NBR0 393 aaPredicted RBP17.71■□□□□ 0.43
SHKBP1-203ENST00000594298 CXorf40AQ8TE69 158 aa17.71■□□□□ 0.43
SHKBP1-203ENST00000594298 PANX2Q96RD6 677 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms