RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 GRM3Q14832 879 aa11.65□□□□□ -0.54
USP35-207ENST00000530546 RNF19BQ6ZMZ0 732 aa11.65□□□□□ -0.54
USP35-207ENST00000530546 TAS1R1Q7RTX1 841 aa11.65□□□□□ -0.54
USP35-207ENST00000530546 TMEM173Q86WV6 379 aaPredicted RBP11.65□□□□□ -0.54
USP35-207ENST00000530546 SPNS2Q8IVW8 549 aa11.65□□□□□ -0.54
USP35-207ENST00000530546 DENND6AQ8IWF6 608 aa11.65□□□□□ -0.54
USP35-207ENST00000530546 ITPKCQ96DU7 683 aa11.65□□□□□ -0.54
USP35-207ENST00000530546 HMCESQ96FZ2 354 aa11.65□□□□□ -0.54
USP35-207ENST00000530546 FUBP3Q96I24 572 aaKnown RBP eCLIP11.65□□□□□ -0.54
USP35-207ENST00000530546 VPS39Q96JC1 886 aa11.65□□□□□ -0.54
USP35-207ENST00000530546 FCRL5Q96RD9 977 aa11.65□□□□□ -0.54
USP35-207ENST00000530546 MRPL1Q9BYD6 325 aaKnown RBP11.65□□□□□ -0.54
USP35-207ENST00000530546 THAP1Q9NVV9 213 aa11.65□□□□□ -0.54
USP35-207ENST00000530546 PSMD3O43242 534 aa11.65□□□□□ -0.54
USP35-207ENST00000530546 SNNO75324 88 aaPredicted RBP11.65□□□□□ -0.54
USP35-207ENST00000530546 SERPINB7O75635 380 aa11.65□□□□□ -0.54
USP35-207ENST00000530546 C2P06681 752 aa11.65□□□□□ -0.54
USP35-207ENST00000530546 SERPINA6P08185 405 aa11.65□□□□□ -0.54
USP35-207ENST00000530546 HAPLN1P10915 354 aaPredicted RBP11.65□□□□□ -0.54
USP35-207ENST00000530546 AOC1P19801 751 aa11.65□□□□□ -0.54
USP35-207ENST00000530546 HOXC13P31276 330 aa11.65□□□□□ -0.54
USP35-207ENST00000530546 ETFBP38117 255 aa11.65□□□□□ -0.54
USP35-207ENST00000530546 MPP1Q00013 466 aa11.65□□□□□ -0.54
USP35-207ENST00000530546 TCTN1Q2MV58 587 aa11.65□□□□□ -0.54
USP35-207ENST00000530546 MS4A13Q5J8X5 152 aa11.65□□□□□ -0.54
USP35-207ENST00000530546 RTP2Q5QGT7 225 aa11.65□□□□□ -0.54
USP35-207ENST00000530546 ARTNQ5T4W7 220 aa11.65□□□□□ -0.54
USP35-207ENST00000530546 PRSS55Q6UWB4 352 aaPredicted RBP11.65□□□□□ -0.54
USP35-207ENST00000530546 PNPLA1Q8N8W4 532 aa11.65□□□□□ -0.54
USP35-207ENST00000530546 MOCOSQ96EN8 888 aa11.65□□□□□ -0.54
USP35-207ENST00000530546 SCLYQ96I15 445 aa11.65□□□□□ -0.54
USP35-207ENST00000530546 FTHL17Q9BXU8 183 aa11.65□□□□□ -0.54
USP35-207ENST00000530546 UNKQ9C0B0 810 aaKnown RBP11.65□□□□□ -0.54
USP35-207ENST00000530546 NOL6Q9H6R4 1146 aaKnown RBP11.65□□□□□ -0.54
USP35-207ENST00000530546 MARCH2Q9P0N8 246 aa11.65□□□□□ -0.54
USP35-207ENST00000530546 FADS3Q9Y5Q0 445 aa11.65□□□□□ -0.54
USP35-207ENST00000530546 NLRC5Q86WI3 1866 aa11.65□□□□□ -0.54
USP35-207ENST00000530546 TBKBP1A7MCY6 615 aa11.64□□□□□ -0.55
USP35-207ENST00000530546 SYN3O14994 580 aa11.64□□□□□ -0.55
USP35-207ENST00000530546 ERFP50548 548 aa11.64□□□□□ -0.55
USP35-207ENST00000530546 GEMP55040 296 aa11.64□□□□□ -0.55
USP35-207ENST00000530546 CCNIQ14094 377 aa11.64□□□□□ -0.55
USP35-207ENST00000530546 GPNMBQ14956 572 aa11.64□□□□□ -0.55
USP35-207ENST00000530546 CNGA3Q16281 694 aa11.64□□□□□ -0.55
USP35-207ENST00000530546 PCID2Q5JVF3 399 aa11.64□□□□□ -0.55
USP35-207ENST00000530546 TMEM53Q6P2H8 277 aa11.64□□□□□ -0.55
USP35-207ENST00000530546 PKN3Q6P5Z2 889 aa11.64□□□□□ -0.55
USP35-207ENST00000530546 TMEM126BQ8IUX1 230 aa11.64□□□□□ -0.55
USP35-207ENST00000530546 AGR3Q8TD06 166 aa11.64□□□□□ -0.55
USP35-207ENST00000530546 IGSF8Q969P0 613 aa11.64□□□□□ -0.55
USP35-207ENST00000530546 SLC39A13Q96H72 371 aa11.64□□□□□ -0.55
USP35-207ENST00000530546 PNPOQ9NVS9 261 aa11.64□□□□□ -0.55
USP35-207ENST00000530546 MARCH5Q9NX47 278 aa11.64□□□□□ -0.55
USP35-207ENST00000530546 COPG2Q9UBF2 871 aa11.64□□□□□ -0.55
USP35-207ENST00000530546 RSL24D1Q9UHA3 163 aaKnown RBP11.64□□□□□ -0.55
USP35-207ENST00000530546 TDRKHQ9Y2W6 561 aaKnown RBP11.64□□□□□ -0.55
USP35-207ENST00000530546 CEPT1Q9Y6K0 416 aa11.64□□□□□ -0.55
USP35-207ENST00000530546 MTMR11A4FU01 709 aa11.64□□□□□ -0.55
USP35-207ENST00000530546 PQBP1O60828 265 aaKnown RBP11.64□□□□□ -0.55
USP35-207ENST00000530546 RALBP11234 206 aa11.64□□□□□ -0.55
USP35-207ENST00000530546 GLRBP48167 497 aa11.64□□□□□ -0.55
USP35-207ENST00000530546 CCL23P55773 120 aa11.64□□□□□ -0.55
USP35-207ENST00000530546 WNT3AP56704 352 aa11.64□□□□□ -0.55
USP35-207ENST00000530546 BTKQ06187 659 aa11.64□□□□□ -0.55
USP35-207ENST00000530546 SLC10A7Q0GE19 358 aa11.64□□□□□ -0.55
USP35-207ENST00000530546 USP10Q14694 798 aaKnown RBP11.64□□□□□ -0.55
USP35-207ENST00000530546 GRAMD1BQ3KR37 738 aa11.64□□□□□ -0.55
USP35-207ENST00000530546 DENND5AQ6IQ26 1287 aa11.64□□□□□ -0.55
USP35-207ENST00000530546 TIGD7Q6NT04 549 aaPredicted RBP11.64□□□□□ -0.55
USP35-207ENST00000530546 FUT10Q6P4F1 479 aa11.64□□□□□ -0.55
USP35-207ENST00000530546 ATG14Q6ZNE5 492 aa11.64□□□□□ -0.55
USP35-207ENST00000530546 SLC41A1Q8IVJ1 513 aa11.64□□□□□ -0.55
USP35-207ENST00000530546 CATSPER1Q8NEC5 780 aa11.64□□□□□ -0.55
USP35-207ENST00000530546 PPHLN1Q8NEY8 458 aaKnown RBP11.64□□□□□ -0.55
USP35-207ENST00000530546 RPRD1AQ96P16 312 aaPredicted RBP11.64□□□□□ -0.55
USP35-207ENST00000530546 CASD1Q96PB1 797 aa11.64□□□□□ -0.55
USP35-207ENST00000530546 TSEN34Q9BSV6 310 aaKnown RBP11.64□□□□□ -0.55
USP35-207ENST00000530546 KIFC1Q9BW19 673 aa11.64□□□□□ -0.55
USP35-207ENST00000530546 ZYG11BQ9C0D3 744 aa11.64□□□□□ -0.55
USP35-207ENST00000530546 CCSER2Q9H7U1 834 aa11.64□□□□□ -0.55
USP35-207ENST00000530546 SP110Q9HB58 689 aa11.64□□□□□ -0.55
USP35-207ENST00000530546 C6orf203Q9P0P8 240 aaPredicted RBP11.64□□□□□ -0.55
USP35-207ENST00000530546 CCDC162PA2VCL2 907 aa11.64□□□□□ -0.55
USP35-207ENST00000530546 DNAJA2O60884 412 aa11.64□□□□□ -0.55
USP35-207ENST00000530546 RPL17P18621 184 aaKnown RBP11.64□□□□□ -0.55
USP35-207ENST00000530546 HALP42357 657 aa11.64□□□□□ -0.55
USP35-207ENST00000530546 ATN1P54259 1190 aaPredicted RBP11.64□□□□□ -0.55
USP35-207ENST00000530546 ZNF460Q14592 562 aa11.64□□□□□ -0.55
USP35-207ENST00000530546 FBXL22Q6P050 247 aa11.64□□□□□ -0.55
USP35-207ENST00000530546 PGM2L1Q6PCE3 622 aa11.64□□□□□ -0.55
USP35-207ENST00000530546 SPATA6LQ8N4H0 392 aa11.64□□□□□ -0.55
USP35-207ENST00000530546 ATP6V0D2Q8N8Y2 350 aa11.64□□□□□ -0.55
USP35-207ENST00000530546 SLC43A3Q8NBI5 491 aa11.64□□□□□ -0.55
USP35-207ENST00000530546 TRPC4APQ8TEL6 797 aa11.64□□□□□ -0.55
USP35-207ENST00000530546 PSMG2Q969U7 264 aa11.64□□□□□ -0.55
USP35-207ENST00000530546 MRGPRX2Q96LB1 330 aa11.64□□□□□ -0.55
USP35-207ENST00000530546 GCNAQ96QF7 691 aa11.64□□□□□ -0.55
USP35-207ENST00000530546 PTPRDP23468 1912 aa11.64□□□□□ -0.55
USP35-207ENST00000530546 TIMM44O43615 452 aa11.63□□□□□ -0.55
USP35-207ENST00000530546 CACNG3O60359 315 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms