RNA–Protein interactions for RNA: ENST00000495308.5

FDPS-219, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-219ENST00000495308 HACD1B0YJ81 288 aa13.68□□□□□ -0.22
FDPS-219ENST00000495308 F5H423 210 aaPredicted RBP13.68□□□□□ -0.22
FDPS-219ENST00000495308 RIOK3O14730 519 aaKnown RBP13.68□□□□□ -0.22
FDPS-219ENST00000495308 TSPAN6O43657 245 aa13.68□□□□□ -0.22
FDPS-219ENST00000495308 MMP20O60882 483 aa13.68□□□□□ -0.22
FDPS-219ENST00000495308 PDHA1P08559 390 aa13.68□□□□□ -0.22
FDPS-219ENST00000495308 MMP12P39900 470 aa13.68□□□□□ -0.22
FDPS-219ENST00000495308 AFF3P51826 1226 aaKnown RBP13.68□□□□□ -0.22
FDPS-219ENST00000495308 RPS21P63220 83 aaKnown RBP13.68□□□□□ -0.22
FDPS-219ENST00000495308 FAM193AP78312 1265 aa13.68□□□□□ -0.22
FDPS-219ENST00000495308 ELP6Q0PNE2 266 aa13.68□□□□□ -0.22
FDPS-219ENST00000495308 WASHC5Q12768 1159 aa13.68□□□□□ -0.22
FDPS-219ENST00000495308 KLF1Q13351 362 aaPredicted RBP13.68□□□□□ -0.22
FDPS-219ENST00000495308 XRCC4Q13426 336 aa13.68□□□□□ -0.22
FDPS-219ENST00000495308 FGL2Q14314 439 aa13.68□□□□□ -0.22
FDPS-219ENST00000495308 SETMARQ53H47 684 aaPredicted RBP13.68□□□□□ -0.22
FDPS-219ENST00000495308 RALGPS1Q5JS13 557 aa13.68□□□□□ -0.22
FDPS-219ENST00000495308 KIAA1161Q6NSJ0 714 aa13.68□□□□□ -0.22
FDPS-219ENST00000495308 NEK5Q6P3R8 708 aa13.68□□□□□ -0.22
FDPS-219ENST00000495308 RABEPKQ7Z6M1 372 aa13.68□□□□□ -0.22
FDPS-219ENST00000495308 ADAT2Q7Z6V5 191 aaKnown RBP13.68□□□□□ -0.22
FDPS-219ENST00000495308 GPR161Q8N6U8 529 aaKnown RBP13.68□□□□□ -0.22
FDPS-219ENST00000495308 CXorf40AQ8TE69 158 aa13.68□□□□□ -0.22
FDPS-219ENST00000495308 HTR3CQ8WXA8 447 aa13.68□□□□□ -0.22
FDPS-219ENST00000495308 FEM1CQ96JP0 617 aa13.68□□□□□ -0.22
FDPS-219ENST00000495308 RBM15Q96T37 977 aaKnown RBP eCLIP13.68□□□□□ -0.223e-6■■□□□ 12.7
FDPS-219ENST00000495308 EDEM2Q9BV94 578 aa13.68□□□□□ -0.22
FDPS-219ENST00000495308 SLC17A9Q9BYT1 436 aa13.68□□□□□ -0.22
FDPS-219ENST00000495308 AASDHPPTQ9NRN7 309 aa13.68□□□□□ -0.22
FDPS-219ENST00000495308 COQ6Q9Y2Z9 468 aa13.68□□□□□ -0.22
FDPS-219ENST00000495308 GOLGA6L9A6NEM1 432 aa13.67□□□□□ -0.22
FDPS-219ENST00000495308 A8MX80 341 aa13.67□□□□□ -0.22
FDPS-219ENST00000495308 ENC1O14682 589 aa13.67□□□□□ -0.22
FDPS-219ENST00000495308 PGLSO95336 258 aa13.67□□□□□ -0.22
FDPS-219ENST00000495308 PAK4O96013 591 aaPredicted RBP13.67□□□□□ -0.22
FDPS-219ENST00000495308 WNT1P04628 370 aa13.67□□□□□ -0.22
FDPS-219ENST00000495308 RBP3P10745 1247 aa13.67□□□□□ -0.22
FDPS-219ENST00000495308 CTPS1P17812 591 aa13.67□□□□□ -0.22
FDPS-219ENST00000495308 ENGP17813 658 aa13.67□□□□□ -0.22
FDPS-219ENST00000495308 CXCR5P32302 372 aa13.67□□□□□ -0.22
FDPS-219ENST00000495308 SUOXP51687 545 aa13.67□□□□□ -0.22
FDPS-219ENST00000495308 POLR2LP62875 67 aaKnown RBP13.67□□□□□ -0.22
FDPS-219ENST00000495308 RACK1P63244 317 aaKnown RBP13.67□□□□□ -0.22
FDPS-219ENST00000495308 SKOR1P84550 965 aa13.67□□□□□ -0.22
FDPS-219ENST00000495308 BNC1Q01954 994 aa13.67□□□□□ -0.22
FDPS-219ENST00000495308 GRIK2Q13002 908 aa13.67□□□□□ -0.22
FDPS-219ENST00000495308 PTPRRQ15256 657 aa13.67□□□□□ -0.22
FDPS-219ENST00000495308 TMEM52BQ4KMG9 183 aa13.67□□□□□ -0.22
FDPS-219ENST00000495308 TEX44Q53QW1 395 aa13.67□□□□□ -0.22
FDPS-219ENST00000495308 ZNF569Q5MCW4 686 aa13.67□□□□□ -0.22
FDPS-219ENST00000495308 ARMC12Q5T9G4 340 aa13.67□□□□□ -0.22
FDPS-219ENST00000495308 NAPEPLDQ6IQ20 393 aa13.67□□□□□ -0.22
FDPS-219ENST00000495308 ERAP2Q6P179 960 aa13.67□□□□□ -0.22
FDPS-219ENST00000495308 ZNF567Q8N184 647 aa13.67□□□□□ -0.22
FDPS-219ENST00000495308 OR2I1PQ8NGU4 316 aa13.67□□□□□ -0.22
FDPS-219ENST00000495308 SPATA22Q8NHS9 363 aa13.67□□□□□ -0.22
FDPS-219ENST00000495308 TEKT5Q96M29 485 aa13.67□□□□□ -0.22
FDPS-219ENST00000495308 SMIM14Q96QK8 99 aa13.67□□□□□ -0.22
FDPS-219ENST00000495308 GTPBP2Q9BX10 602 aaKnown RBP13.67□□□□□ -0.22
FDPS-219ENST00000495308 TDRD1Q9BXT4 1180 aaKnown RBP13.67□□□□□ -0.22
FDPS-219ENST00000495308 CARD9Q9H257 536 aa13.67□□□□□ -0.22
FDPS-219ENST00000495308 GLOD4Q9HC38 313 aa13.67□□□□□ -0.22
FDPS-219ENST00000495308 KLHL8Q9P2G9 620 aaPredicted RBP13.67□□□□□ -0.22
FDPS-219ENST00000495308 TPX2Q9ULW0 747 aaKnown RBP13.67□□□□□ -0.22
FDPS-219ENST00000495308 DMTF1Q9Y222 760 aa13.67□□□□□ -0.22
FDPS-219ENST00000495308 CHKBQ9Y259 395 aa13.67□□□□□ -0.22
FDPS-219ENST00000495308 KNL1Q8NG31 2342 aa13.66□□□□□ -0.22
FDPS-219ENST00000495308 SCN8AQ9UQD0 1980 aa13.66□□□□□ -0.22
FDPS-219ENST00000495308 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.66□□□□□ -0.22
FDPS-219ENST00000495308 A0A1W2PR77 199 aa13.66□□□□□ -0.22
FDPS-219ENST00000495308 PRR5-ARHGAP8B1AHC4 643 aa13.66□□□□□ -0.22
FDPS-219ENST00000495308 H0Y8X5 98 aa13.66□□□□□ -0.22
FDPS-219ENST00000495308 ARHGAP33O14559 1287 aa13.66□□□□□ -0.22
FDPS-219ENST00000495308 KCNN4O15554 427 aa13.66□□□□□ -0.22
FDPS-219ENST00000495308 MTSS1O43312 755 aa13.66□□□□□ -0.22
FDPS-219ENST00000495308 FZD6O60353 706 aa13.66□□□□□ -0.22
FDPS-219ENST00000495308 MT-CYBP00156 380 aaPredicted RBP13.66□□□□□ -0.22
FDPS-219ENST00000495308 NFKB1P19838 968 aa13.66□□□□□ -0.22
FDPS-219ENST00000495308 HNRNPA2B1P22626 353 aaKnown RBP13.66□□□□□ -0.22
FDPS-219ENST00000495308 CES1P23141 567 aa13.66□□□□□ -0.22
FDPS-219ENST00000495308 CD38P28907 300 aa13.66□□□□□ -0.22
FDPS-219ENST00000495308 CD68P34810 354 aaPredicted RBP13.66□□□□□ -0.22
FDPS-219ENST00000495308 GRIA4P48058 902 aa13.66□□□□□ -0.22
FDPS-219ENST00000495308 LIG3P49916 1009 aa13.66□□□□□ -0.22
FDPS-219ENST00000495308 CLDN2P57739 230 aa13.66□□□□□ -0.22
FDPS-219ENST00000495308 LMNB2Q03252 620 aa13.66□□□□□ -0.22
FDPS-219ENST00000495308 RALGDSQ12967 914 aa13.66□□□□□ -0.22
FDPS-219ENST00000495308 DARS2Q6PI48 645 aaKnown RBP13.66□□□□□ -0.22
FDPS-219ENST00000495308 SLC13A5Q86YT5 568 aaPredicted RBP13.66□□□□□ -0.22
FDPS-219ENST00000495308 CDKL3Q8IVW4 592 aaPredicted RBP13.66□□□□□ -0.22
FDPS-219ENST00000495308 SLC35F6Q8N357 371 aa13.66□□□□□ -0.22
FDPS-219ENST00000495308 PIH1D2Q8WWB5 315 aa13.66□□□□□ -0.22
FDPS-219ENST00000495308 ATG4AQ8WYN0 398 aa13.66□□□□□ -0.22
FDPS-219ENST00000495308 IMP4Q96G21 291 aaKnown RBP13.66□□□□□ -0.22
FDPS-219ENST00000495308 SLC25A51Q9H1U9 297 aa13.66□□□□□ -0.22
FDPS-219ENST00000495308 UBP1Q9NZI7 540 aa13.66□□□□□ -0.22
FDPS-219ENST00000495308 B4GALT6Q9UBX8 382 aa13.66□□□□□ -0.22
FDPS-219ENST00000495308 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.66□□□□□ -0.22
FDPS-219ENST00000495308 MYLKQ15746 1914 aa13.66□□□□□ -0.22
FDPS-219ENST00000495308 TDRD6O60522 2096 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms