RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-205ENST00000492650 SLC30A6Q6NXT4 461 aa3.47□□□□□ -1.85
VPS36-205ENST00000492650 NFRKBQ6P4R8 1299 aa3.47□□□□□ -1.85
VPS36-205ENST00000492650 SERPINA11Q86U17 422 aa3.47□□□□□ -1.85
VPS36-205ENST00000492650 VSIG1Q86XK7 387 aa3.47□□□□□ -1.85
VPS36-205ENST00000492650 GALNT13Q8IUC8 556 aa3.47□□□□□ -1.85
VPS36-205ENST00000492650 HERC6Q8IVU3 1022 aa3.47□□□□□ -1.85
VPS36-205ENST00000492650 TMEM163Q8TC26 289 aa3.47□□□□□ -1.85
VPS36-205ENST00000492650 C2CD4CQ8TF44 421 aa3.47□□□□□ -1.85
VPS36-205ENST00000492650 CPT1BQ92523 772 aa3.47□□□□□ -1.85
VPS36-205ENST00000492650 CCDC47Q96A33 483 aaKnown RBP3.47□□□□□ -1.85
VPS36-205ENST00000492650 SH3KBP1Q96B97 665 aa3.47□□□□□ -1.85
VPS36-205ENST00000492650 PIGSQ96S52 555 aa3.47□□□□□ -1.85
VPS36-205ENST00000492650 SLF1Q9BQI6 1058 aa3.47□□□□□ -1.85
VPS36-205ENST00000492650 SLC25A33Q9BSK2 321 aa3.47□□□□□ -1.85
VPS36-205ENST00000492650 AGXT2Q9BYV1 514 aa3.47□□□□□ -1.85
VPS36-205ENST00000492650 TXLNGYQ9BZA5 131 aa3.47□□□□□ -1.85
VPS36-205ENST00000492650 XPO4Q9C0E2 1151 aaKnown RBP3.47□□□□□ -1.85
VPS36-205ENST00000492650 LHPPQ9H008 270 aa3.47□□□□□ -1.85
VPS36-205ENST00000492650 ACAD9Q9H845 621 aa3.47□□□□□ -1.85
VPS36-205ENST00000492650 TCF7L2Q9NQB0 619 aa3.47□□□□□ -1.85
VPS36-205ENST00000492650 TMEM160Q9NX00 188 aa3.47□□□□□ -1.85
VPS36-205ENST00000492650 TBC1D29Q9UFV1 150 aa3.47□□□□□ -1.85
VPS36-205ENST00000492650 SRP68Q9UHB9 627 aaKnown RBP3.47□□□□□ -1.85
VPS36-205ENST00000492650 VPS28Q9UK41 221 aa3.47□□□□□ -1.85
VPS36-205ENST00000492650 TMCC3Q9ULS5 477 aa3.47□□□□□ -1.85
VPS36-205ENST00000492650 DAPP1Q9UN19 280 aa3.47□□□□□ -1.85
VPS36-205ENST00000492650 RAI2Q9Y5P3 530 aa3.47□□□□□ -1.85
VPS36-205ENST00000492650 RSF1Q96T23 1441 aaPredicted RBP3.46□□□□□ -1.86
VPS36-205ENST00000492650 A0A0A0MQY5 61 aa3.46□□□□□ -1.86
VPS36-205ENST00000492650 IGLV5-52A0A0A0MRZ9 124 aa3.46□□□□□ -1.86
VPS36-205ENST00000492650 A0A0B4J293 547 aa3.46□□□□□ -1.86
VPS36-205ENST00000492650 IGHV4-28A0A0C4DH34 117 aa3.46□□□□□ -1.86
VPS36-205ENST00000492650 KDM4EB2RXH2 506 aaPredicted RBP3.46□□□□□ -1.86
VPS36-205ENST00000492650 SYN3O14994 580 aa3.46□□□□□ -1.86
VPS36-205ENST00000492650 HMMRO75330 724 aa3.46□□□□□ -1.86
VPS36-205ENST00000492650 TMEM63AO94886 807 aa3.46□□□□□ -1.86
VPS36-205ENST00000492650 SOX30O94993 753 aa3.46□□□□□ -1.86
VPS36-205ENST00000492650 CLDN7O95471 211 aa3.46□□□□□ -1.86
VPS36-205ENST00000492650 STARD3NLO95772 234 aa3.46□□□□□ -1.86
VPS36-205ENST00000492650 DDAH2O95865 285 aa3.46□□□□□ -1.86
VPS36-205ENST00000492650 MMP3P08254 477 aa3.46□□□□□ -1.86
VPS36-205ENST00000492650 ITGA2BP08514 1039 aa3.46□□□□□ -1.86
VPS36-205ENST00000492650 LYL1P12980 280 aa3.46□□□□□ -1.86
VPS36-205ENST00000492650 CYP4B1P13584 511 aa3.46□□□□□ -1.86
VPS36-205ENST00000492650 CHMP24386 653 aa3.46□□□□□ -1.86
VPS36-205ENST00000492650 CDK7P50613 346 aa3.46□□□□□ -1.86
VPS36-205ENST00000492650 DLX5P56178 289 aa3.46□□□□□ -1.86
VPS36-205ENST00000492650 BPIFB3P59826 476 aa3.46□□□□□ -1.86
VPS36-205ENST00000492650 UBE3AQ05086 875 aa3.46□□□□□ -1.86
VPS36-205ENST00000492650 NEXNQ0ZGT2 675 aa3.46□□□□□ -1.86
VPS36-205ENST00000492650 PPP2R5CQ13362 524 aa3.46□□□□□ -1.86
VPS36-205ENST00000492650 SMC1AQ14683 1233 aaKnown RBP3.46□□□□□ -1.86
VPS36-205ENST00000492650 SF3B4Q15427 424 aaKnown RBP eCLIP3.46□□□□□ -1.863e-11■■■■■ 60.4
VPS36-205ENST00000492650 DNAJC21Q5F1R6 531 aaKnown RBP3.46□□□□□ -1.86
VPS36-205ENST00000492650 LIN54Q6MZP7 749 aa3.46□□□□□ -1.86
VPS36-205ENST00000492650 ZNF449Q6P9G9 518 aa3.46□□□□□ -1.86
VPS36-205ENST00000492650 SYNE3Q6ZMZ3 975 aa3.46□□□□□ -1.86
VPS36-205ENST00000492650 RAB11FIP2Q7L804 512 aa3.46□□□□□ -1.86
VPS36-205ENST00000492650 WDR5BQ86VZ2 330 aa3.46□□□□□ -1.86
VPS36-205ENST00000492650 C2CD5Q86YS7 1000 aa3.46□□□□□ -1.86
VPS36-205ENST00000492650 CCDC117Q8IWD4 279 aaPredicted RBP3.46□□□□□ -1.86
VPS36-205ENST00000492650 SCN4BQ8IWT1 228 aa3.46□□□□□ -1.86
VPS36-205ENST00000492650 MSANTD4Q8NCY6 345 aa3.46□□□□□ -1.86
VPS36-205ENST00000492650 OTUD7AQ8TE49 926 aaPredicted RBP3.46□□□□□ -1.86
VPS36-205ENST00000492650 HDAC7Q8WUI4 952 aa3.46□□□□□ -1.86
VPS36-205ENST00000492650 RUBCNQ92622 972 aa3.46□□□□□ -1.86
VPS36-205ENST00000492650 RILPL2Q969X0 211 aa3.46□□□□□ -1.86
VPS36-205ENST00000492650 ZUFSPQ96AP4 578 aa3.46□□□□□ -1.86
VPS36-205ENST00000492650 C3orf49Q96BT1 292 aa3.46□□□□□ -1.86
VPS36-205ENST00000492650 EID2BQ96D98 161 aa3.46□□□□□ -1.86
VPS36-205ENST00000492650 TBC1D31Q96DN5 1066 aa3.46□□□□□ -1.86
VPS36-205ENST00000492650 CCDC34Q96HJ3 373 aa3.46□□□□□ -1.86
VPS36-205ENST00000492650 TXNDC15Q96J42 360 aa3.46□□□□□ -1.86
VPS36-205ENST00000492650 FRG2BQ96QU4 278 aa3.46□□□□□ -1.86
VPS36-205ENST00000492650 PAIP1Q9H074 479 aaKnown RBP3.46□□□□□ -1.86
VPS36-205ENST00000492650 CLPBQ9H078 707 aa3.46□□□□□ -1.86
VPS36-205ENST00000492650 IL25Q9H293 177 aa3.46□□□□□ -1.86
VPS36-205ENST00000492650 ZWILCHQ9H900 591 aa3.46□□□□□ -1.86
VPS36-205ENST00000492650 SAYSD1Q9NPB0 183 aa3.46□□□□□ -1.86
VPS36-205ENST00000492650 KRT84Q9NSB2 600 aa3.46□□□□□ -1.86
VPS36-205ENST00000492650 ABCF3Q9NUQ8 709 aa3.46□□□□□ -1.86
VPS36-205ENST00000492650 HAUS2Q9NVX0 235 aa3.46□□□□□ -1.86
VPS36-205ENST00000492650 KLQ9UEF7 1012 aa3.46□□□□□ -1.86
VPS36-205ENST00000492650 FEM1BQ9UK73 627 aa3.46□□□□□ -1.86
VPS36-205ENST00000492650 ARHGAP26Q9UNA1 814 aa3.46□□□□□ -1.86
VPS36-205ENST00000492650 GPRASP1Q5JY77 1395 aa3.46□□□□□ -1.86
VPS36-205ENST00000492650 TDRD9Q8NDG6 1382 aaKnown RBP3.46□□□□□ -1.86
VPS36-205ENST00000492650 CHL1O00533 1208 aa3.45□□□□□ -1.86
VPS36-205ENST00000492650 CLGNO14967 610 aa3.45□□□□□ -1.86
VPS36-205ENST00000492650 HNRNPRO43390 633 aaKnown RBP3.45□□□□□ -1.86
VPS36-205ENST00000492650 KRT36O76013 467 aa3.45□□□□□ -1.86
VPS36-205ENST00000492650 ACTL6BO94805 426 aa3.45□□□□□ -1.86
VPS36-205ENST00000492650 HSPA4LO95757 839 aa3.45□□□□□ -1.86
VPS36-205ENST00000492650 ADRB2P07550 413 aa3.45□□□□□ -1.86
VPS36-205ENST00000492650 DAOP14920 347 aa3.45□□□□□ -1.86
VPS36-205ENST00000492650 TCEA1P23193 301 aaKnown RBP3.45□□□□□ -1.86
VPS36-205ENST00000492650 SERPINA4P29622 427 aa3.45□□□□□ -1.86
VPS36-205ENST00000492650 ACTN2P35609 894 aa3.45□□□□□ -1.86
VPS36-205ENST00000492650 SKIV2L2P42285 1042 aaKnown RBP3.45□□□□□ -1.86
VPS36-205ENST00000492650 DPP6P42658 865 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms