RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 NPWQ8N729 165 aa12.43□□□□□ -0.42
USP11-206ENST00000469080 NIPA2Q8N8Q9 360 aa12.43□□□□□ -0.42
USP11-206ENST00000469080 BRSK1Q8TDC3 778 aa12.43□□□□□ -0.42
USP11-206ENST00000469080 C8orf48Q96LL4 319 aa12.43□□□□□ -0.42
USP11-206ENST00000469080 SPATA13Q96N96 652 aa12.43□□□□□ -0.42
USP11-206ENST00000469080 Q9H521 79 aa12.43□□□□□ -0.42
USP11-206ENST00000469080 GTSE1Q9NYZ3 720 aa12.43□□□□□ -0.42
USP11-206ENST00000469080 CRYL1Q9Y2S2 319 aa12.43□□□□□ -0.42
USP11-206ENST00000469080 PSME4Q14997 1843 aa12.43□□□□□ -0.42
USP11-206ENST00000469080 PAPPA2Q9BXP8 1791 aa12.43□□□□□ -0.42
USP11-206ENST00000469080 DAOAP59103 153 aa12.43□□□□□ -0.42
USP11-206ENST00000469080 CDC42EP1Q00587 391 aa12.43□□□□□ -0.42
USP11-206ENST00000469080 PRPSAP1Q14558 356 aa12.43□□□□□ -0.42
USP11-206ENST00000469080 ANO4Q32M45 955 aa12.43□□□□□ -0.42
USP11-206ENST00000469080 IL23RQ5VWK5 629 aa12.43□□□□□ -0.42
USP11-206ENST00000469080 MFSD5Q6N075 450 aa12.43□□□□□ -0.42
USP11-206ENST00000469080 PAQR9Q6ZVX9 377 aa12.43□□□□□ -0.42
USP11-206ENST00000469080 LILRB4Q8NHJ6 448 aa12.43□□□□□ -0.42
USP11-206ENST00000469080 DDI1Q8WTU0 396 aa12.43□□□□□ -0.42
USP11-206ENST00000469080 RMDN1Q96DB5 314 aa12.43□□□□□ -0.42
USP11-206ENST00000469080 PHF21BQ96EK2 531 aa12.43□□□□□ -0.42
USP11-206ENST00000469080 HSFY1Q96LI6 401 aa12.43□□□□□ -0.42
USP11-206ENST00000469080 PANX3Q96QZ0 392 aa12.43□□□□□ -0.42
USP11-206ENST00000469080 TUBB6Q9BUF5 446 aa12.43□□□□□ -0.42
USP11-206ENST00000469080 RBM38Q9H0Z9 239 aaKnown RBP12.43□□□□□ -0.42
USP11-206ENST00000469080 KLHL3Q9UH77 587 aa12.43□□□□□ -0.42
USP11-206ENST00000469080 SHROOM3Q8TF72 1996 aa12.43□□□□□ -0.42
USP11-206ENST00000469080 ZBBXA8MT70 800 aa12.43□□□□□ -0.42
USP11-206ENST00000469080 PAGE1O75459 146 aa12.43□□□□□ -0.42
USP11-206ENST00000469080 CAPN1P07384 714 aa12.43□□□□□ -0.42
USP11-206ENST00000469080 NR1H2P55055 460 aa12.43□□□□□ -0.42
USP11-206ENST00000469080 SREBF2Q12772 1141 aa12.43□□□□□ -0.42
USP11-206ENST00000469080 CARTPTQ16568 116 aa12.43□□□□□ -0.42
USP11-206ENST00000469080 CCDC58Q4VC31 144 aa12.43□□□□□ -0.42
USP11-206ENST00000469080 OR6K2Q8NGY2 324 aa12.43□□□□□ -0.42
USP11-206ENST00000469080 PMEPA1Q969W9 287 aa12.43□□□□□ -0.42
USP11-206ENST00000469080 VMP1Q96GC9 406 aa12.43□□□□□ -0.42
USP11-206ENST00000469080 ZNF670Q9BS34 389 aa12.43□□□□□ -0.42
USP11-206ENST00000469080 NUMBLQ9Y6R0 609 aa12.43□□□□□ -0.42
USP11-206ENST00000469080 COL1A2P08123 1366 aa12.42□□□□□ -0.42
USP11-206ENST00000469080 TAF4O00268 1085 aa12.42□□□□□ -0.42
USP11-206ENST00000469080 TPTEP56180 551 aa12.42□□□□□ -0.42
USP11-206ENST00000469080 UBAP2LQ14157 1087 aaKnown RBP12.42□□□□□ -0.42
USP11-206ENST00000469080 TRMT5Q32P41 509 aaKnown RBP12.42□□□□□ -0.42
USP11-206ENST00000469080 DENND6AQ8IWF6 608 aa12.42□□□□□ -0.42
USP11-206ENST00000469080 ZMIZ2Q8NF64 920 aa12.42□□□□□ -0.42
USP11-206ENST00000469080 DCAKDQ8WVC6 231 aa12.42□□□□□ -0.42
USP11-206ENST00000469080 SOCS4Q8WXH5 440 aa12.42□□□□□ -0.42
USP11-206ENST00000469080 EBNA1BP2Q99848 306 aaKnown RBP12.42□□□□□ -0.42
USP11-206ENST00000469080 CTRCQ99895 268 aa12.42□□□□□ -0.42
USP11-206ENST00000469080 SEZ6LQ9BYH1 1024 aa12.42□□□□□ -0.42
USP11-206ENST00000469080 DAPK2Q9UIK4 370 aa12.42□□□□□ -0.42
USP11-206ENST00000469080 PCDHGB4Q9UN71 923 aa12.42□□□□□ -0.42
USP11-206ENST00000469080 DTNAQ9Y4J8 743 aa12.42□□□□□ -0.42
USP11-206ENST00000469080 PCDHGB5Q9Y5G0 923 aa12.42□□□□□ -0.42
USP11-206ENST00000469080 CEPT1Q9Y6K0 416 aa12.42□□□□□ -0.42
USP11-206ENST00000469080 EDF1O60869 148 aaKnown RBP12.42□□□□□ -0.42
USP11-206ENST00000469080 SIN3BO75182 1162 aa12.42□□□□□ -0.42
USP11-206ENST00000469080 PRKACAP17612 351 aa12.42□□□□□ -0.42
USP11-206ENST00000469080 RASA2Q15283 850 aa12.42□□□□□ -0.42
USP11-206ENST00000469080 TLR1Q15399 786 aa12.42□□□□□ -0.42
USP11-206ENST00000469080 C17orf99Q6UX52 265 aa12.42□□□□□ -0.42
USP11-206ENST00000469080 LSM14AQ8ND56 463 aaKnown RBP12.42□□□□□ -0.42
USP11-206ENST00000469080 ELMO2Q96JJ3 720 aa12.42□□□□□ -0.42
USP11-206ENST00000469080 DEFB118Q96PH6 123 aa12.42□□□□□ -0.42
USP11-206ENST00000469080 FTHL17Q9BXU8 183 aa12.42□□□□□ -0.42
USP11-206ENST00000469080 GMIPQ9P107 970 aa12.42□□□□□ -0.42
USP11-206ENST00000469080 ZNHIT2Q9UHR6 403 aa12.42□□□□□ -0.42
USP11-206ENST00000469080 SLC24A2Q9UI40 661 aa12.42□□□□□ -0.42
USP11-206ENST00000469080 FZD10Q9ULW2 581 aa12.42□□□□□ -0.42
USP11-206ENST00000469080 FARP1Q9Y4F1 1045 aaPredicted RBP12.42□□□□□ -0.42
USP11-206ENST00000469080 OR51F1A6NGY5 319 aa12.42□□□□□ -0.42
USP11-206ENST00000469080 NCF1BA6NI72 391 aaPredicted RBP12.42□□□□□ -0.42
USP11-206ENST00000469080 NCF1CA8MVU1 366 aaPredicted RBP12.42□□□□□ -0.42
USP11-206ENST00000469080 TNFAIP8O95379 198 aa12.42□□□□□ -0.42
USP11-206ENST00000469080 ESRRBO95718 433 aa12.42□□□□□ -0.42
USP11-206ENST00000469080 THRAP10827 490 aa12.42□□□□□ -0.42
USP11-206ENST00000469080 NCF1P14598 390 aaPredicted RBP12.42□□□□□ -0.42
USP11-206ENST00000469080 ETV3P41162 512 aa12.42□□□□□ -0.42
USP11-206ENST00000469080 IRF9Q00978 393 aa12.42□□□□□ -0.42
USP11-206ENST00000469080 TCEAL1Q15170 157 aa12.42□□□□□ -0.42
USP11-206ENST00000469080 MORN1Q5T089 497 aa12.42□□□□□ -0.42
USP11-206ENST00000469080 AAGABQ6PD74 315 aa12.42□□□□□ -0.42
USP11-206ENST00000469080 ITIH5Q86UX2 942 aa12.42□□□□□ -0.42
USP11-206ENST00000469080 GSTCDQ8NEC7 633 aa12.42□□□□□ -0.42
USP11-206ENST00000469080 URGCPQ8TCY9 931 aa12.42□□□□□ -0.42
USP11-206ENST00000469080 SLCO2A1Q92959 643 aa12.42□□□□□ -0.42
USP11-206ENST00000469080 HERC2P3Q9BVR0 1158 aa12.42□□□□□ -0.42
USP11-206ENST00000469080 MRPL9Q9BYD2 267 aaKnown RBP12.42□□□□□ -0.42
USP11-206ENST00000469080 NFKBIZQ9BYH8 718 aa12.42□□□□□ -0.42
USP11-206ENST00000469080 PNPOQ9NVS9 261 aa12.42□□□□□ -0.42
USP11-206ENST00000469080 WDR81Q562E7 1941 aa12.41□□□□□ -0.42
USP11-206ENST00000469080 BAIAP3O94812 1187 aa12.41□□□□□ -0.42
USP11-206ENST00000469080 NELFEP18615 380 aaKnown RBP12.41□□□□□ -0.42
USP11-206ENST00000469080 NMBRP28336 390 aa12.41□□□□□ -0.42
USP11-206ENST00000469080 RAB15P59190 212 aa12.41□□□□□ -0.42
USP11-206ENST00000469080 GK3PQ14409 553 aa12.41□□□□□ -0.42
USP11-206ENST00000469080 NANOGP8Q6NSW7 305 aa12.41□□□□□ -0.42
USP11-206ENST00000469080 TTC23LQ6PF05 361 aa12.41□□□□□ -0.42
USP11-206ENST00000469080 LAYNQ6UX15 382 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms