RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	THEGL	P0DJG4	465 aa		12.84	□□□□□ -0.35
FDPS-204	ENST00000461507	AKT2	P31751	481 aa		12.84	□□□□□ -0.35
FDPS-204	ENST00000461507	SCNN1B	P51168	640 aa		12.84	□□□□□ -0.35
FDPS-204	ENST00000461507	ARSE	P51690	589 aa		12.84	□□□□□ -0.35
FDPS-204	ENST00000461507	DNAJC3	Q13217	504 aa		12.84	□□□□□ -0.35
FDPS-204	ENST00000461507	TCEAL1	Q15170	157 aa		12.84	□□□□□ -0.35
FDPS-204	ENST00000461507	MYLK3	Q32MK0	819 aa		12.84	□□□□□ -0.35
FDPS-204	ENST00000461507	CCDC181	Q5TID7	509 aa		12.84	□□□□□ -0.35
FDPS-204	ENST00000461507	AFMID	Q63HM1	303 aa		12.84	□□□□□ -0.35
FDPS-204	ENST00000461507	SEL1L3	Q68CR1	1132 aa		12.84	□□□□□ -0.35
FDPS-204	ENST00000461507	GDPD4	Q6W3E5	623 aa		12.84	□□□□□ -0.35
FDPS-204	ENST00000461507	KYAT3	Q6YP21	454 aa	Known RBP	12.84	□□□□□ -0.35
FDPS-204	ENST00000461507	SLC22A18AS	Q8N1D0	253 aa		12.84	□□□□□ -0.35
FDPS-204	ENST00000461507	PDCD7	Q8N8D1	485 aa	Known RBP	12.84	□□□□□ -0.35
FDPS-204	ENST00000461507	TSEN2	Q8NCE0	465 aa	Known RBP	12.84	□□□□□ -0.35
FDPS-204	ENST00000461507	OR13H1	Q8NG92	308 aa		12.84	□□□□□ -0.35
FDPS-204	ENST00000461507	LRRN4	Q8WUT4	740 aa		12.84	□□□□□ -0.35
FDPS-204	ENST00000461507	KLK6	Q92876	244 aa		12.84	□□□□□ -0.35
FDPS-204	ENST00000461507	RAB7B	Q96AH8	199 aa		12.84	□□□□□ -0.35
FDPS-204	ENST00000461507	MYOC	Q99972	504 aa		12.84	□□□□□ -0.35
FDPS-204	ENST00000461507	OSBPL1A	Q9BXW6	950 aa		12.84	□□□□□ -0.35
FDPS-204	ENST00000461507	LACRT	Q9GZZ8	138 aa		12.84	□□□□□ -0.35
FDPS-204	ENST00000461507	PDF	Q9HBH1	243 aa		12.84	□□□□□ -0.35
FDPS-204	ENST00000461507	SCUBE2	Q9NQ36	999 aa		12.84	□□□□□ -0.35
FDPS-204	ENST00000461507	TRIM10	Q9UDY6	481 aa		12.84	□□□□□ -0.35
FDPS-204	ENST00000461507	SEPT3	Q9UH03	358 aa		12.84	□□□□□ -0.35
FDPS-204	ENST00000461507	SALL4	Q9UJQ4	1053 aa		12.84	□□□□□ -0.35
FDPS-204	ENST00000461507	RALY	Q9UKM9	306 aa	Known RBP	12.84	□□□□□ -0.35
FDPS-204	ENST00000461507	LHX6	Q9UPM6	363 aa		12.84	□□□□□ -0.35
FDPS-204	ENST00000461507	FADS3	Q9Y5Q0	445 aa		12.84	□□□□□ -0.35
FDPS-204	ENST00000461507	LAMA5	O15230	3695 aa		12.83	□□□□□ -0.36
FDPS-204	ENST00000461507	ATRX	P46100	2492 aa		12.83	□□□□□ -0.36
FDPS-204	ENST00000461507	FAM149A	A5PLN7	773 aa		12.83	□□□□□ -0.36
FDPS-204	ENST00000461507	TRABD2B	A6NFA1	517 aa		12.83	□□□□□ -0.36
FDPS-204	ENST00000461507		A6NNZ2	444 aa		12.83	□□□□□ -0.36
FDPS-204	ENST00000461507	SLC31A1	O15431	190 aa		12.83	□□□□□ -0.36
FDPS-204	ENST00000461507	INSIG1	O15503	277 aa		12.83	□□□□□ -0.36
FDPS-204	ENST00000461507	ARHGAP6	O43182	974 aa		12.83	□□□□□ -0.36
FDPS-204	ENST00000461507	SPINT1	O43278	529 aa		12.83	□□□□□ -0.36
FDPS-204	ENST00000461507	GIMD1	P0DJR0	217 aa		12.83	□□□□□ -0.36
FDPS-204	ENST00000461507	CKMT2	P17540	419 aa		12.83	□□□□□ -0.36
FDPS-204	ENST00000461507	MX2	P20592	715 aa		12.83	□□□□□ -0.36
FDPS-204	ENST00000461507	IL4R	P24394	825 aa		12.83	□□□□□ -0.36
FDPS-204	ENST00000461507	ACP1	P24666	158 aa		12.83	□□□□□ -0.36
FDPS-204	ENST00000461507	HNF1B	P35680	557 aa		12.83	□□□□□ -0.36
FDPS-204	ENST00000461507	MMP13	P45452	471 aa		12.83	□□□□□ -0.36
FDPS-204	ENST00000461507	MARCKSL1	P49006	195 aa		12.83	□□□□□ -0.36
FDPS-204	ENST00000461507	RENBP	P51606	427 aa		12.83	□□□□□ -0.36
FDPS-204	ENST00000461507	HADHB	P55084	474 aa	Known RBP	12.83	□□□□□ -0.36
FDPS-204	ENST00000461507	RPS21	P63220	83 aa	Known RBP	12.83	□□□□□ -0.36
FDPS-204	ENST00000461507	GBE1	Q04446	702 aa		12.83	□□□□□ -0.36
FDPS-204	ENST00000461507	ZNF211	Q13398	564 aa	Predicted RBP	12.83	□□□□□ -0.36
FDPS-204	ENST00000461507	FGL2	Q14314	439 aa		12.83	□□□□□ -0.36
FDPS-204	ENST00000461507	RFTN1	Q14699	578 aa	Predicted RBP	12.83	□□□□□ -0.36
FDPS-204	ENST00000461507	MARC1	Q5VT66	337 aa		12.83	□□□□□ -0.36
FDPS-204	ENST00000461507	LRRC38	Q5VT99	294 aa		12.83	□□□□□ -0.36
FDPS-204	ENST00000461507	MFSD7	Q6UXD7	560 aa		12.83	□□□□□ -0.36
FDPS-204	ENST00000461507	MARCH9	Q86YJ5	346 aa		12.83	□□□□□ -0.36
FDPS-204	ENST00000461507	DCP2	Q8IU60	420 aa	Known RBP	12.83	□□□□□ -0.36
FDPS-204	ENST00000461507	SLC25A45	Q8N413	288 aa		12.83	□□□□□ -0.36
FDPS-204	ENST00000461507	DENND6B	Q8NEG7	585 aa		12.83	□□□□□ -0.36
FDPS-204	ENST00000461507	OR4C6	Q8NH72	309 aa		12.83	□□□□□ -0.36
FDPS-204	ENST00000461507	KIAA1524	Q8TCG1	905 aa		12.83	□□□□□ -0.36
FDPS-204	ENST00000461507	PDCD6IP	Q8WUM4	868 aa	Known RBP	12.83	□□□□□ -0.36
FDPS-204	ENST00000461507	ASB12	Q8WXK4	309 aa		12.83	□□□□□ -0.36
FDPS-204	ENST00000461507	HAUS1	Q96CS2	278 aa		12.83	□□□□□ -0.36
FDPS-204	ENST00000461507	RNF157	Q96PX1	679 aa		12.83	□□□□□ -0.36
FDPS-204	ENST00000461507	KLF6	Q99612	283 aa	Predicted RBP	12.83	□□□□□ -0.36
FDPS-204	ENST00000461507	C1QTNF2	Q9BXJ5	285 aa		12.83	□□□□□ -0.36
FDPS-204	ENST00000461507	NT5M	Q9NPB1	228 aa		12.83	□□□□□ -0.36
FDPS-204	ENST00000461507	FZD3	Q9NPG1	666 aa		12.83	□□□□□ -0.36
FDPS-204	ENST00000461507	SEPT10	Q9P0V9	454 aa		12.83	□□□□□ -0.36
FDPS-204	ENST00000461507	GUCA1B	Q9UMX6	200 aa		12.83	□□□□□ -0.36
FDPS-204	ENST00000461507	HS3ST3A1	Q9Y663	406 aa		12.83	□□□□□ -0.36
FDPS-204	ENST00000461507	COL27A1	Q8IZC6	1860 aa	Predicted RBP	12.82	□□□□□ -0.36
FDPS-204	ENST00000461507		A0A0U1RQJ8	604 aa		12.82	□□□□□ -0.36
FDPS-204	ENST00000461507	TTC24	A2A3L6	582 aa	Predicted RBP	12.82	□□□□□ -0.36
FDPS-204	ENST00000461507	C16orf96	A6NNT2	1141 aa		12.82	□□□□□ -0.36
FDPS-204	ENST00000461507	TRIM38	O00635	465 aa		12.82	□□□□□ -0.36
FDPS-204	ENST00000461507	TSPAN6	O43657	245 aa		12.82	□□□□□ -0.36
FDPS-204	ENST00000461507	SDC3	O75056	442 aa		12.82	□□□□□ -0.36
FDPS-204	ENST00000461507	PIAS2	O75928	621 aa		12.82	□□□□□ -0.36
FDPS-204	ENST00000461507	ZRANB2	O95218	330 aa	Known RBP eCLIP	12.82	□□□□□ -0.36	7e-7	■■□□□ 11.4
FDPS-204	ENST00000461507	FTCD	O95954	541 aa		12.82	□□□□□ -0.36
FDPS-204	ENST00000461507	KRT10	P13645	584 aa		12.82	□□□□□ -0.36
FDPS-204	ENST00000461507	ZFX	P17010	805 aa	Predicted RBP	12.82	□□□□□ -0.36
FDPS-204	ENST00000461507	DGKA	P23743	735 aa		12.82	□□□□□ -0.36
FDPS-204	ENST00000461507	SERPINA4	P29622	427 aa		12.82	□□□□□ -0.36
FDPS-204	ENST00000461507	GARS	P41250	739 aa	Known RBP	12.82	□□□□□ -0.36
FDPS-204	ENST00000461507	ABL2	P42684	1182 aa		12.82	□□□□□ -0.36
FDPS-204	ENST00000461507	RGR	P47804	291 aa		12.82	□□□□□ -0.36
FDPS-204	ENST00000461507	MAX	P61244	160 aa		12.82	□□□□□ -0.36
FDPS-204	ENST00000461507	BCL2L1	Q07817	233 aa		12.82	□□□□□ -0.36
FDPS-204	ENST00000461507	SLC10A7	Q0GE19	358 aa		12.82	□□□□□ -0.36
FDPS-204	ENST00000461507	AP1B1	Q10567	949 aa		12.82	□□□□□ -0.36
FDPS-204	ENST00000461507	PAFAH1B3	Q15102	231 aa	Known RBP	12.82	□□□□□ -0.36
FDPS-204	ENST00000461507	ZNF805	Q5CZA5	627 aa		12.82	□□□□□ -0.36
FDPS-204	ENST00000461507	HES3	Q5TGS1	186 aa		12.82	□□□□□ -0.36
FDPS-204	ENST00000461507	TIGD7	Q6NT04	549 aa	Predicted RBP	12.82	□□□□□ -0.36
FDPS-204	ENST00000461507	NPNT	Q6UXI9	565 aa		12.82	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms