RNA–Protein interactions for RNA: ENST00000457748.1

GTF3C2-208, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-208ENST00000457748 FAM193AP78312 1265 aa12.53□□□□□ -0.4
GTF3C2-208ENST00000457748 CNTN1Q12860 1018 aa12.53□□□□□ -0.4
GTF3C2-208ENST00000457748 CDH17Q12864 832 aa12.53□□□□□ -0.4
GTF3C2-208ENST00000457748 HLTFQ14527 1009 aaKnown RBP eCLIP12.53□□□□□ -0.4
GTF3C2-208ENST00000457748 KCNJ11Q14654 390 aa12.53□□□□□ -0.4
GTF3C2-208ENST00000457748 SLC1A5Q15758 541 aa12.53□□□□□ -0.4
GTF3C2-208ENST00000457748 UGP2Q16851 508 aa12.53□□□□□ -0.4
GTF3C2-208ENST00000457748 SIRPB2Q5JXA9 342 aa12.53□□□□□ -0.4
GTF3C2-208ENST00000457748 RNASEH2BQ5TBB1 312 aaKnown RBP12.53□□□□□ -0.4
GTF3C2-208ENST00000457748 KCTD11Q693B1 232 aa12.53□□□□□ -0.4
GTF3C2-208ENST00000457748 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.53□□□□□ -0.4
GTF3C2-208ENST00000457748 MAMSTRQ6ZN01 415 aa12.53□□□□□ -0.4
GTF3C2-208ENST00000457748 USP30Q70CQ3 517 aa12.53□□□□□ -0.4
GTF3C2-208ENST00000457748 PARS2Q7L3T8 475 aaKnown RBP12.53□□□□□ -0.4
GTF3C2-208ENST00000457748 MCUQ8NE86 351 aa12.53□□□□□ -0.4
GTF3C2-208ENST00000457748 RAB7BQ96AH8 199 aa12.53□□□□□ -0.4
GTF3C2-208ENST00000457748 ARRDC3Q96B67 414 aa12.53□□□□□ -0.4
GTF3C2-208ENST00000457748 ECHDC3Q96DC8 303 aa12.53□□□□□ -0.4
GTF3C2-208ENST00000457748 NSMCE3Q96MG7 304 aa12.53□□□□□ -0.4
GTF3C2-208ENST00000457748 SRPK1Q96SB4 655 aaKnown RBP12.53□□□□□ -0.4
GTF3C2-208ENST00000457748 GORASP1Q9BQQ3 440 aa12.53□□□□□ -0.4
GTF3C2-208ENST00000457748 FRMD8Q9BZ67 464 aaPredicted RBP12.53□□□□□ -0.4
GTF3C2-208ENST00000457748 BFARQ9NZS9 450 aa12.53□□□□□ -0.4
GTF3C2-208ENST00000457748 DLGAP2Q9P1A6 1054 aa12.53□□□□□ -0.4
GTF3C2-208ENST00000457748 HCN4Q9Y3Q4 1203 aa12.53□□□□□ -0.4
GTF3C2-208ENST00000457748 LOC285095A0A1B0GVY8 99 aa12.52□□□□□ -0.41
GTF3C2-208ENST00000457748 ESYT3A0FGR9 886 aa12.52□□□□□ -0.41
GTF3C2-208ENST00000457748 TSPAN11A1L157 253 aa12.52□□□□□ -0.41
GTF3C2-208ENST00000457748 ANKRD66B4E2M5 251 aa12.52□□□□□ -0.41
GTF3C2-208ENST00000457748 ZNF217O75362 1048 aa12.52□□□□□ -0.41
GTF3C2-208ENST00000457748 PAPSS2O95340 614 aaPredicted RBP12.52□□□□□ -0.41
GTF3C2-208ENST00000457748 PDHA1P08559 390 aa12.52□□□□□ -0.41
GTF3C2-208ENST00000457748 ADRB3P13945 408 aa12.52□□□□□ -0.41
GTF3C2-208ENST00000457748 TIMP2P16035 220 aa12.52□□□□□ -0.41
GTF3C2-208ENST00000457748 CTPS1P17812 591 aa12.52□□□□□ -0.41
GTF3C2-208ENST00000457748 IVDP26440 423 aa12.52□□□□□ -0.41
GTF3C2-208ENST00000457748 OXTRP30559 389 aa12.52□□□□□ -0.41
GTF3C2-208ENST00000457748 ADRA1AP35348 466 aa12.52□□□□□ -0.41
GTF3C2-208ENST00000457748 P2RY2P41231 377 aa12.52□□□□□ -0.41
GTF3C2-208ENST00000457748 PLTPP55058 493 aa12.52□□□□□ -0.41
GTF3C2-208ENST00000457748 ARL4CP56559 192 aa12.52□□□□□ -0.41
GTF3C2-208ENST00000457748 SESN2P58004 480 aaPredicted RBP12.52□□□□□ -0.41
GTF3C2-208ENST00000457748 ELP6Q0PNE2 266 aa12.52□□□□□ -0.41
GTF3C2-208ENST00000457748 CUL1Q13616 776 aa12.52□□□□□ -0.41
GTF3C2-208ENST00000457748 ARHGEF7Q14155 803 aa12.52□□□□□ -0.41
GTF3C2-208ENST00000457748 IHHQ14623 411 aa12.52□□□□□ -0.41
GTF3C2-208ENST00000457748 DNAJC21Q5F1R6 531 aaKnown RBP12.52□□□□□ -0.41
GTF3C2-208ENST00000457748 LRRC73Q5JTD7 316 aa12.52□□□□□ -0.41
GTF3C2-208ENST00000457748 TMEM31Q5JXX7 168 aa12.52□□□□□ -0.41
GTF3C2-208ENST00000457748 ANKRD22Q5VYY1 191 aa12.52□□□□□ -0.41
GTF3C2-208ENST00000457748 RANBP10Q6VN20 620 aa12.52□□□□□ -0.41
GTF3C2-208ENST00000457748 FAM124AQ86V42 546 aa12.52□□□□□ -0.41
GTF3C2-208ENST00000457748 C1orf210Q8IVY1 113 aa12.52□□□□□ -0.41
GTF3C2-208ENST00000457748 KLHDC8BQ8IXV7 354 aa12.52□□□□□ -0.41
GTF3C2-208ENST00000457748 AADATQ8N5Z0 425 aa12.52□□□□□ -0.41
GTF3C2-208ENST00000457748 NAT8LQ8N9F0 302 aa12.52□□□□□ -0.41
GTF3C2-208ENST00000457748 DTWD2Q8NBA8 298 aa12.52□□□□□ -0.41
GTF3C2-208ENST00000457748 MDGA1Q8NFP4 955 aa12.52□□□□□ -0.41
GTF3C2-208ENST00000457748 OR52K1Q8NGK4 314 aa12.52□□□□□ -0.41
GTF3C2-208ENST00000457748 OR14C36Q8NHC7 312 aa12.52□□□□□ -0.41
GTF3C2-208ENST00000457748 PIH1D2Q8WWB5 315 aa12.52□□□□□ -0.41
GTF3C2-208ENST00000457748 FAM122AQ96E09 287 aa12.52□□□□□ -0.41
GTF3C2-208ENST00000457748 SPACA7Q96KW9 195 aa12.52□□□□□ -0.41
GTF3C2-208ENST00000457748 TRIB3Q96RU7 358 aa12.52□□□□□ -0.41
GTF3C2-208ENST00000457748 FAM129AQ9BZQ8 928 aa12.52□□□□□ -0.41
GTF3C2-208ENST00000457748 CD248Q9HCU0 757 aa12.52□□□□□ -0.41
GTF3C2-208ENST00000457748 PCDH12Q9NPG4 1184 aa12.52□□□□□ -0.41
GTF3C2-208ENST00000457748 C2orf42Q9NWW7 574 aa12.52□□□□□ -0.41
GTF3C2-208ENST00000457748 HACD3Q9P035 362 aa12.52□□□□□ -0.41
GTF3C2-208ENST00000457748 MTRF1LQ9UGC7 380 aaKnown RBP12.52□□□□□ -0.41
GTF3C2-208ENST00000457748 DMGDHQ9UI17 866 aaKnown RBP12.52□□□□□ -0.41
GTF3C2-208ENST00000457748 FZD4Q9ULV1 537 aa12.52□□□□□ -0.41
GTF3C2-208ENST00000457748 A0A0J9YYE9 177 aa12.51□□□□□ -0.41
GTF3C2-208ENST00000457748 TCRBV7S3A2A0A539 114 aa12.51□□□□□ -0.41
GTF3C2-208ENST00000457748 FAM86C2PA6NEL3 165 aa12.51□□□□□ -0.41
GTF3C2-208ENST00000457748 PLK4O00444 970 aa12.51□□□□□ -0.41
GTF3C2-208ENST00000457748 AXIN1O15169 862 aa12.51□□□□□ -0.41
GTF3C2-208ENST00000457748 SLC7A4O43246 635 aa12.51□□□□□ -0.41
GTF3C2-208ENST00000457748 FZD6O60353 706 aa12.51□□□□□ -0.41
GTF3C2-208ENST00000457748 PCDH8O95206 1070 aa12.51□□□□□ -0.41
GTF3C2-208ENST00000457748 PRLP01236 227 aa12.51□□□□□ -0.41
GTF3C2-208ENST00000457748 TRBC1P01850 177 aa12.51□□□□□ -0.41
GTF3C2-208ENST00000457748 ATXN1LP0C7T5 689 aaKnown RBP12.51□□□□□ -0.41
GTF3C2-208ENST00000457748 MLNP12872 115 aa12.51□□□□□ -0.41
GTF3C2-208ENST00000457748 MCM3P25205 808 aa12.51□□□□□ -0.41
GTF3C2-208ENST00000457748 PLA2G5P39877 138 aa12.51□□□□□ -0.41
GTF3C2-208ENST00000457748 ABL2P42684 1182 aa12.51□□□□□ -0.41
GTF3C2-208ENST00000457748 CHRNA4P43681 627 aa12.51□□□□□ -0.41
GTF3C2-208ENST00000457748 PXNP49023 591 aaPredicted RBP12.51□□□□□ -0.41
GTF3C2-208ENST00000457748 NPY2RP49146 381 aa12.51□□□□□ -0.41
GTF3C2-208ENST00000457748 TPMTP51580 245 aa12.51□□□□□ -0.41
GTF3C2-208ENST00000457748 METAP1P53582 386 aa12.51□□□□□ -0.41
GTF3C2-208ENST00000457748 CSTF1Q05048 431 aaKnown RBP12.51□□□□□ -0.41
GTF3C2-208ENST00000457748 OLIG2Q13516 323 aa12.51□□□□□ -0.41
GTF3C2-208ENST00000457748 LAMB3Q13751 1172 aa12.51□□□□□ -0.41
GTF3C2-208ENST00000457748 SEPT6Q14141 434 aa12.51□□□□□ -0.41
GTF3C2-208ENST00000457748 QPCTQ16769 361 aa12.51□□□□□ -0.41
GTF3C2-208ENST00000457748 USP39Q53GS9 565 aaKnown RBP12.51□□□□□ -0.41
GTF3C2-208ENST00000457748 HIBCHQ6NVY1 386 aaPredicted RBP12.51□□□□□ -0.41
GTF3C2-208ENST00000457748 CASC4Q6P4E1 433 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms