RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 HTR1BP28222 390 aa17.33■□□□□ 0.36
UBE2D4-209ENST00000454428 UGT1A3P35503 534 aa17.33■□□□□ 0.36
UBE2D4-209ENST00000454428 CCR10P46092 362 aa17.33■□□□□ 0.36
UBE2D4-209ENST00000454428 NCAPHQ15003 741 aa17.33■□□□□ 0.36
UBE2D4-209ENST00000454428 RAB6CQ53S08 254 aa17.33■□□□□ 0.36
UBE2D4-209ENST00000454428 FAM131BQ86XD5 332 aa17.33■□□□□ 0.36
UBE2D4-209ENST00000454428 IRF2BP1Q8IU81 584 aa17.33■□□□□ 0.36
UBE2D4-209ENST00000454428 ZDHHC17Q8IUH5 632 aa17.33■□□□□ 0.36
UBE2D4-209ENST00000454428 PLA2G15Q8NCC3 412 aa17.33■□□□□ 0.36
UBE2D4-209ENST00000454428 FAM46DQ8NEK8 389 aa17.33■□□□□ 0.36
UBE2D4-209ENST00000454428 CCL4L1Q8NHW4 92 aa17.33■□□□□ 0.36
UBE2D4-209ENST00000454428 SMARCE1Q969G3 411 aa17.33■□□□□ 0.36
UBE2D4-209ENST00000454428 MIB2Q96AX9 1013 aa17.33■□□□□ 0.36
UBE2D4-209ENST00000454428 NUDT22Q9BRQ3 303 aa17.33■□□□□ 0.36
UBE2D4-209ENST00000454428 MAGEB5Q9BZ81 275 aa17.33■□□□□ 0.36
UBE2D4-209ENST00000454428 RAB6CQ9H0N0 254 aa17.33■□□□□ 0.36
UBE2D4-209ENST00000454428 FGF22Q9HCT0 170 aa17.33■□□□□ 0.36
UBE2D4-209ENST00000454428 PAXBP1Q9Y5B6 917 aa17.33■□□□□ 0.36
UBE2D4-209ENST00000454428 PCDHGA3Q9Y5H0 932 aa17.33■□□□□ 0.36
UBE2D4-209ENST00000454428 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.33■□□□□ 0.36
UBE2D4-209ENST00000454428 CSMD1Q96PZ7 3565 aa17.33■□□□□ 0.36
UBE2D4-209ENST00000454428 CREBBPQ92793 2442 aa17.32■□□□□ 0.36
UBE2D4-209ENST00000454428 CENPEQ02224 2701 aa17.32■□□□□ 0.36
UBE2D4-209ENST00000454428 IGHV5-10-1A0A0J9YXX1 117 aa17.32■□□□□ 0.36
UBE2D4-209ENST00000454428 B4DGG1 531 aa17.32■□□□□ 0.36
UBE2D4-209ENST00000454428 PPP1R3GB7ZBB8 358 aa17.32■□□□□ 0.36
UBE2D4-209ENST00000454428 TMCC1O94876 653 aa17.32■□□□□ 0.36
UBE2D4-209ENST00000454428 CPNE6O95741 557 aa17.32■□□□□ 0.36
UBE2D4-209ENST00000454428 HSP90AA1P07900 732 aaKnown RBP17.32■□□□□ 0.36
UBE2D4-209ENST00000454428 CLCN1P35523 988 aa17.32■□□□□ 0.36
UBE2D4-209ENST00000454428 GABRB2P47870 512 aa17.32■□□□□ 0.36
UBE2D4-209ENST00000454428 ATP1A2P50993 1020 aa17.32■□□□□ 0.36
UBE2D4-209ENST00000454428 OR1D5P58170 312 aa17.32■□□□□ 0.36
UBE2D4-209ENST00000454428 ARHGEF7Q14155 803 aa17.32■□□□□ 0.36
UBE2D4-209ENST00000454428 AGERQ15109 404 aa17.32■□□□□ 0.36
UBE2D4-209ENST00000454428 MAP9Q49MG5 647 aa17.32■□□□□ 0.36
UBE2D4-209ENST00000454428 TMEM164Q5U3C3 297 aa17.32■□□□□ 0.36
UBE2D4-209ENST00000454428 SPECC1LQ69YQ0 1117 aa17.32■□□□□ 0.36
UBE2D4-209ENST00000454428 TAF8Q7Z7C8 310 aa17.32■□□□□ 0.36
UBE2D4-209ENST00000454428 SLC47A2Q86VL8 602 aa17.32■□□□□ 0.36
UBE2D4-209ENST00000454428 C17orf82Q86X59 251 aaPredicted RBP17.32■□□□□ 0.36
UBE2D4-209ENST00000454428 TAAR9Q96RI9 348 aa17.32■□□□□ 0.36
UBE2D4-209ENST00000454428 TTYH3Q9C0H2 523 aa17.32■□□□□ 0.36
UBE2D4-209ENST00000454428 TMEM168Q9H0V1 697 aa17.32■□□□□ 0.36
UBE2D4-209ENST00000454428 CDH19Q9H159 772 aa17.32■□□□□ 0.36
UBE2D4-209ENST00000454428 SYNCQ9H7C4 482 aa17.32■□□□□ 0.36
UBE2D4-209ENST00000454428 DNAI1Q9UI46 699 aa17.32■□□□□ 0.36
UBE2D4-209ENST00000454428 MFHAS1Q9Y4C4 1052 aa17.32■□□□□ 0.36
UBE2D4-209ENST00000454428 DAAM1Q9Y4D1 1078 aa17.32■□□□□ 0.36
UBE2D4-209ENST00000454428 B3GALT1Q9Y5Z6 326 aa17.32■□□□□ 0.36
UBE2D4-209ENST00000454428 FAM170AA1A519 330 aa17.31■□□□□ 0.36
UBE2D4-209ENST00000454428 FAM72CH0Y354 149 aa17.31■□□□□ 0.36
UBE2D4-209ENST00000454428 HGSO14964 777 aaPredicted RBP17.31■□□□□ 0.36
UBE2D4-209ENST00000454428 NKX2-8O15522 239 aa17.31■□□□□ 0.36
UBE2D4-209ENST00000454428 SMC2O95347 1197 aa17.31■□□□□ 0.36
UBE2D4-209ENST00000454428 PCCBP05166 539 aa17.31■□□□□ 0.36
UBE2D4-209ENST00000454428 CD97P48960 835 aa17.31■□□□□ 0.36
UBE2D4-209ENST00000454428 GEMIN4P57678 1058 aaKnown RBP17.31■□□□□ 0.36
UBE2D4-209ENST00000454428 NR1D2Q14995 579 aa17.31■□□□□ 0.36
UBE2D4-209ENST00000454428 AMZ1Q400G9 498 aa17.31■□□□□ 0.36
UBE2D4-209ENST00000454428 FAM102AQ5T9C2 384 aaPredicted RBP17.31■□□□□ 0.36
UBE2D4-209ENST00000454428 FAM72AQ5TYM5 149 aa17.31■□□□□ 0.36
UBE2D4-209ENST00000454428 KLHL10Q6JEL2 608 aa17.31■□□□□ 0.36
UBE2D4-209ENST00000454428 FAM72DQ6L9T8 149 aa17.31■□□□□ 0.36
UBE2D4-209ENST00000454428 ZNF438Q7Z4V0 828 aa17.31■□□□□ 0.36
UBE2D4-209ENST00000454428 PIM3Q86V86 326 aa17.31■□□□□ 0.36
UBE2D4-209ENST00000454428 FAM72BQ86X60 149 aa17.31■□□□□ 0.36
UBE2D4-209ENST00000454428 XYLT1Q86Y38 959 aa17.31■□□□□ 0.36
UBE2D4-209ENST00000454428 IL22RA1Q8N6P7 574 aa17.31■□□□□ 0.36
UBE2D4-209ENST00000454428 C9orf43Q8TAL5 461 aaPredicted RBP17.31■□□□□ 0.36
UBE2D4-209ENST00000454428 NELFBQ8WX92 580 aa17.31■□□□□ 0.36
UBE2D4-209ENST00000454428 CCDC34Q96HJ3 373 aa17.31■□□□□ 0.36
UBE2D4-209ENST00000454428 CCDC74BQ96LY2 380 aa17.31■□□□□ 0.36
UBE2D4-209ENST00000454428 CFAP57Q96MR6 1250 aa17.31■□□□□ 0.36
UBE2D4-209ENST00000454428 GDAP1L1Q96MZ0 367 aa17.31■□□□□ 0.36
UBE2D4-209ENST00000454428 KLC2Q9H0B6 622 aa17.31■□□□□ 0.36
UBE2D4-209ENST00000454428 DACH1Q9UI36 760 aa17.31■□□□□ 0.36
UBE2D4-209ENST00000454428 TMEM59LQ9UK28 342 aa17.31■□□□□ 0.36
UBE2D4-209ENST00000454428 MAN1B1Q9UKM7 699 aa17.31■□□□□ 0.36
UBE2D4-209ENST00000454428 LRBAP50851 2863 aa17.3■□□□□ 0.36
UBE2D4-209ENST00000454428 TSPAN11A1L157 253 aa17.3■□□□□ 0.36
UBE2D4-209ENST00000454428 KDELR3O43731 214 aa17.3■□□□□ 0.36
UBE2D4-209ENST00000454428 DUX1O43812 170 aa17.3■□□□□ 0.36
UBE2D4-209ENST00000454428 PIGNO95427 931 aa17.3■□□□□ 0.36
UBE2D4-209ENST00000454428 PNMA6AP0CW24 399 aaPredicted RBP17.3■□□□□ 0.36
UBE2D4-209ENST00000454428 CD1CP29017 333 aa17.3■□□□□ 0.36
UBE2D4-209ENST00000454428 CDH5P33151 784 aaPredicted RBP17.3■□□□□ 0.36
UBE2D4-209ENST00000454428 SCNN1AP37088 669 aa17.3■□□□□ 0.36
UBE2D4-209ENST00000454428 ETFBP38117 255 aa17.3■□□□□ 0.36
UBE2D4-209ENST00000454428 MAPKAPK2P49137 400 aa17.3■□□□□ 0.36
UBE2D4-209ENST00000454428 MAZP56270 477 aaKnown RBP17.3■□□□□ 0.36
UBE2D4-209ENST00000454428 NRG1Q02297 640 aaPredicted RBP17.3■□□□□ 0.36
UBE2D4-209ENST00000454428 MTM1Q13496 603 aa17.3■□□□□ 0.36
UBE2D4-209ENST00000454428 STIM1Q13586 685 aa17.3■□□□□ 0.36
UBE2D4-209ENST00000454428 C2CD6Q53TS8 623 aa17.3■□□□□ 0.36
UBE2D4-209ENST00000454428 HSCBQ8IWL3 235 aa17.3■□□□□ 0.36
UBE2D4-209ENST00000454428 CACNA2D3Q8IZS8 1091 aa17.3■□□□□ 0.36
UBE2D4-209ENST00000454428 OR56A4Q8NGH8 313 aa17.3■□□□□ 0.36
UBE2D4-209ENST00000454428 GPBAR1Q8TDU6 330 aa17.3■□□□□ 0.36
UBE2D4-209ENST00000454428 MAGEH1Q9H213 219 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms