RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 EXOC2Q96KP1 924 aa18.18■□□□□ 0.5
CHCHD3-203ENST00000448878 SLC25A18Q9H1K4 315 aa18.18■□□□□ 0.5
CHCHD3-203ENST00000448878 DPEP2Q9H4A9 486 aa18.18■□□□□ 0.5
CHCHD3-203ENST00000448878 DAAM1Q9Y4D1 1078 aa18.18■□□□□ 0.5
CHCHD3-203ENST00000448878 CHD5Q8TDI0 1954 aa18.17■□□□□ 0.5
CHCHD3-203ENST00000448878 INSIG1O15503 277 aa18.17■□□□□ 0.5
CHCHD3-203ENST00000448878 LRIG2O94898 1065 aa18.17■□□□□ 0.5
CHCHD3-203ENST00000448878 PIGNO95427 931 aa18.17■□□□□ 0.5
CHCHD3-203ENST00000448878 PLEKP08567 350 aaPredicted RBP18.17■□□□□ 0.5
CHCHD3-203ENST00000448878 SDC4P31431 198 aa18.17■□□□□ 0.5
CHCHD3-203ENST00000448878 ZFP36L1Q07352 338 aaKnown RBP18.17■□□□□ 0.5
CHCHD3-203ENST00000448878 ERAP2Q6P179 960 aa18.17■□□□□ 0.5
CHCHD3-203ENST00000448878 BNIPLQ7Z465 357 aa18.17■□□□□ 0.5
CHCHD3-203ENST00000448878 IRF2BP1Q8IU81 584 aa18.17■□□□□ 0.5
CHCHD3-203ENST00000448878 GPR156Q8NFN8 814 aa18.17■□□□□ 0.5
CHCHD3-203ENST00000448878 RXFP2Q8WXD0 754 aa18.17■□□□□ 0.5
CHCHD3-203ENST00000448878 VOPP1Q96AW1 172 aa18.17■□□□□ 0.5
CHCHD3-203ENST00000448878 PDXPQ96GD0 296 aa18.17■□□□□ 0.5
CHCHD3-203ENST00000448878 SEMA3CQ99985 751 aa18.17■□□□□ 0.5
CHCHD3-203ENST00000448878 DKK3Q9UBP4 350 aa18.17■□□□□ 0.5
CHCHD3-203ENST00000448878 APPL1Q9UKG1 709 aa18.17■□□□□ 0.5
CHCHD3-203ENST00000448878 MMEP08473 750 aa18.16■□□□□ 0.5
CHCHD3-203ENST00000448878 WT1P19544 449 aaPredicted RBP18.16■□□□□ 0.5
CHCHD3-203ENST00000448878 LIG3P49916 1009 aa18.16■□□□□ 0.5
CHCHD3-203ENST00000448878 NRG1Q02297 640 aaPredicted RBP18.16■□□□□ 0.5
CHCHD3-203ENST00000448878 CLCA4Q14CN2 919 aa18.16■□□□□ 0.5
CHCHD3-203ENST00000448878 AMZ1Q400G9 498 aa18.16■□□□□ 0.5
CHCHD3-203ENST00000448878 SFTPA2Q8IWL1 248 aa18.16■□□□□ 0.5
CHCHD3-203ENST00000448878 RBM15Q96T37 977 aaKnown RBP eCLIP18.16■□□□□ 0.5
CHCHD3-203ENST00000448878 SEMA6CQ9H3T2 930 aa18.16■□□□□ 0.5
CHCHD3-203ENST00000448878 RETREG1Q9H6L5 497 aa18.16■□□□□ 0.5
CHCHD3-203ENST00000448878 SUDS3Q9H7L9 328 aaPredicted RBP18.16■□□□□ 0.5
CHCHD3-203ENST00000448878 RDH14Q9HBH5 336 aa18.16■□□□□ 0.5
CHCHD3-203ENST00000448878 PCDH12Q9NPG4 1184 aa18.16■□□□□ 0.5
CHCHD3-203ENST00000448878 MRPL40Q9NQ50 206 aaKnown RBP18.16■□□□□ 0.5
CHCHD3-203ENST00000448878 A0A1W2PQC6 194 aa18.15■□□□□ 0.5
CHCHD3-203ENST00000448878 C9orf172C9J069 976 aa18.15■□□□□ 0.5
CHCHD3-203ENST00000448878 CACNB4O00305 520 aaPredicted RBP18.15■□□□□ 0.5
CHCHD3-203ENST00000448878 PRKCGP05129 697 aa18.15■□□□□ 0.5
CHCHD3-203ENST00000448878 PRKCSHP14314 528 aaPredicted RBP18.15■□□□□ 0.5
CHCHD3-203ENST00000448878 SUOXP51687 545 aa18.15■□□□□ 0.5
CHCHD3-203ENST00000448878 BIRC2Q13490 618 aa18.15■□□□□ 0.5
CHCHD3-203ENST00000448878 UGP2Q16851 508 aa18.15■□□□□ 0.5
CHCHD3-203ENST00000448878 CCDC14Q49A88 953 aa18.15■□□□□ 0.5
CHCHD3-203ENST00000448878 C14orf28Q4W4Y0 310 aa18.15■□□□□ 0.5
CHCHD3-203ENST00000448878 CERCAMQ5T4B2 595 aa18.15■□□□□ 0.5
CHCHD3-203ENST00000448878 MANEALQ5VSG8 457 aa18.15■□□□□ 0.5
CHCHD3-203ENST00000448878 KCTD16Q68DU8 428 aa18.15■□□□□ 0.5
CHCHD3-203ENST00000448878 SPRED1Q7Z699 444 aa18.15■□□□□ 0.5
CHCHD3-203ENST00000448878 NOP9Q86U38 636 aaKnown RBP18.15■□□□□ 0.5
CHCHD3-203ENST00000448878 PIM3Q86V86 326 aa18.15■□□□□ 0.5
CHCHD3-203ENST00000448878 CCDC185Q8N715 623 aa18.15■□□□□ 0.5
CHCHD3-203ENST00000448878 PLA2G15Q8NCC3 412 aa18.15■□□□□ 0.5
CHCHD3-203ENST00000448878 OR56A4Q8NGH8 313 aa18.15■□□□□ 0.5
CHCHD3-203ENST00000448878 GPT2Q8TD30 523 aa18.15■□□□□ 0.5
CHCHD3-203ENST00000448878 HTR3CQ8WXA8 447 aa18.15■□□□□ 0.5
CHCHD3-203ENST00000448878 CASKIN2Q8WXE0 1202 aa18.15■□□□□ 0.5
CHCHD3-203ENST00000448878 OR1E3Q8WZA6 343 aa18.15■□□□□ 0.5
CHCHD3-203ENST00000448878 KLC2Q9H0B6 622 aa18.15■□□□□ 0.5
CHCHD3-203ENST00000448878 SUV39H2Q9H5I1 410 aa18.15■□□□□ 0.5
CHCHD3-203ENST00000448878 GEMIN8Q9NWZ8 242 aaKnown RBP18.15■□□□□ 0.5
CHCHD3-203ENST00000448878 MFHAS1Q9Y4C4 1052 aa18.15■□□□□ 0.5
CHCHD3-203ENST00000448878 FHOD1Q9Y613 1164 aa18.15■□□□□ 0.5
CHCHD3-203ENST00000448878 BOD1L1Q8NFC6 3051 aa18.15■□□□□ 0.5
CHCHD3-203ENST00000448878 NAV2Q8IVL1 2488 aa18.14■□□□□ 0.5
CHCHD3-203ENST00000448878 LSM8O95777 96 aaKnown RBP18.14■□□□□ 0.49
CHCHD3-203ENST00000448878 PNLIPP16233 465 aa18.14■□□□□ 0.49
CHCHD3-203ENST00000448878 CD82P27701 267 aa18.14■□□□□ 0.49
CHCHD3-203ENST00000448878 EPHB2P29323 1055 aa18.14■□□□□ 0.49
CHCHD3-203ENST00000448878 ALDH4A1P30038 563 aa18.14■□□□□ 0.49
CHCHD3-203ENST00000448878 NOMO3P69849 1222 aa18.14■□□□□ 0.49
CHCHD3-203ENST00000448878 MTM1Q13496 603 aa18.14■□□□□ 0.49
CHCHD3-203ENST00000448878 MAN2A1Q16706 1144 aa18.14■□□□□ 0.49
CHCHD3-203ENST00000448878 INO80DQ53TQ3 878 aaPredicted RBP18.14■□□□□ 0.49
CHCHD3-203ENST00000448878 OGFOD3Q6PK18 319 aa18.14■□□□□ 0.49
CHCHD3-203ENST00000448878 ARCQ7LC44 396 aa18.14■□□□□ 0.49
CHCHD3-203ENST00000448878 TMPRSS9Q7Z410 1059 aa18.14■□□□□ 0.49
CHCHD3-203ENST00000448878 TMEM168Q9H0V1 697 aa18.14■□□□□ 0.49
CHCHD3-203ENST00000448878 NDST4Q9H3R1 872 aa18.14■□□□□ 0.49
CHCHD3-203ENST00000448878 CYP4F12Q9HCS2 524 aa18.14■□□□□ 0.49
CHCHD3-203ENST00000448878 TMEM202A6NGA9 273 aa18.13■□□□□ 0.49
CHCHD3-203ENST00000448878 STMND1H3BQB6 276 aa18.13■□□□□ 0.49
CHCHD3-203ENST00000448878 CCL4P13236 92 aa18.13■□□□□ 0.49
CHCHD3-203ENST00000448878 ATP1A2P50993 1020 aa18.13■□□□□ 0.49
CHCHD3-203ENST00000448878 C16orf72Q14CZ0 275 aa18.13■□□□□ 0.49
CHCHD3-203ENST00000448878 CAMK4Q16566 473 aa18.13■□□□□ 0.49
CHCHD3-203ENST00000448878 VWA3BQ502W6 1294 aa18.13■□□□□ 0.49
CHCHD3-203ENST00000448878 HSP90AA4PQ58FG1 418 aa18.13■□□□□ 0.49
CHCHD3-203ENST00000448878 SPECC1LQ69YQ0 1117 aa18.13■□□□□ 0.49
CHCHD3-203ENST00000448878 SMYD5Q6GMV2 418 aa18.13■□□□□ 0.49
CHCHD3-203ENST00000448878 SCYL2Q6P3W7 929 aa18.13■□□□□ 0.49
CHCHD3-203ENST00000448878 DTX1Q86Y01 620 aa18.13■□□□□ 0.49
CHCHD3-203ENST00000448878 DNAAF5Q86Y56 855 aa18.13■□□□□ 0.49
CHCHD3-203ENST00000448878 PYROXD2Q8N2H3 581 aa18.13■□□□□ 0.49
CHCHD3-203ENST00000448878 IL22RA1Q8N6P7 574 aa18.13■□□□□ 0.49
CHCHD3-203ENST00000448878 RCBTB1Q8NDN9 531 aa18.13■□□□□ 0.49
CHCHD3-203ENST00000448878 CCL4L1Q8NHW4 92 aa18.13■□□□□ 0.49
CHCHD3-203ENST00000448878 JOSD2Q8TAC2 188 aa18.13■□□□□ 0.49
CHCHD3-203ENST00000448878 FAM172AQ8WUF8 416 aa18.13■□□□□ 0.49
CHCHD3-203ENST00000448878 DGKBQ9Y6T7 804 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms