RNA–Protein interactions for RNA: ENST00000439200.5

CHEK2-216, Transcript of checkpoint kinase 2, humanhuman

TSL 5

Gene CHEK2, Length 906 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-216ENST00000439200 KIAA1468Q9P260 1216 aa13.35□□□□□ -0.27
CHEK2-216ENST00000439200 DKK3Q9UBP4 350 aa13.35□□□□□ -0.27
CHEK2-216ENST00000439200 KLQ9UEF7 1012 aa13.35□□□□□ -0.27
CHEK2-216ENST00000439200 AHCTF1Q8WYP5 2266 aa13.34□□□□□ -0.27
CHEK2-216ENST00000439200 SCN8AQ9UQD0 1980 aa13.34□□□□□ -0.27
CHEK2-216ENST00000439200 PRAMEF33A0A0G2JMD5 474 aa13.34□□□□□ -0.27
CHEK2-216ENST00000439200 ZSCAN5CA6NGD5 496 aaPredicted RBP13.34□□□□□ -0.27
CHEK2-216ENST00000439200 C2CD4BA6NLJ0 364 aa13.34□□□□□ -0.27
CHEK2-216ENST00000439200 TMEM110-MUSTN1A8MSY1 372 aa13.34□□□□□ -0.27
CHEK2-216ENST00000439200 PES1O00541 588 aaKnown RBP13.34□□□□□ -0.27
CHEK2-216ENST00000439200 TERTO14746 1132 aaKnown RBP13.34□□□□□ -0.27
CHEK2-216ENST00000439200 NVLO15381 856 aaKnown RBP13.34□□□□□ -0.27
CHEK2-216ENST00000439200 PRAMEF10O60809 474 aa13.34□□□□□ -0.27
CHEK2-216ENST00000439200 ITGB2P05107 769 aa13.34□□□□□ -0.27
CHEK2-216ENST00000439200 PCCBP05166 539 aa13.34□□□□□ -0.27
CHEK2-216ENST00000439200 HTR1BP28222 390 aa13.34□□□□□ -0.27
CHEK2-216ENST00000439200 ELP6Q0PNE2 266 aa13.34□□□□□ -0.27
CHEK2-216ENST00000439200 MANEAQ5SRI9 462 aa13.34□□□□□ -0.27
CHEK2-216ENST00000439200 ZFAND4Q86XD8 727 aa13.34□□□□□ -0.27
CHEK2-216ENST00000439200 PYROXD2Q8N2H3 581 aa13.34□□□□□ -0.27
CHEK2-216ENST00000439200 GPR156Q8NFN8 814 aa13.34□□□□□ -0.27
CHEK2-216ENST00000439200 FAM172AQ8WUF8 416 aa13.34□□□□□ -0.27
CHEK2-216ENST00000439200 HMCESQ96FZ2 354 aa13.34□□□□□ -0.27
CHEK2-216ENST00000439200 WDR92Q96MX6 357 aa13.34□□□□□ -0.27
CHEK2-216ENST00000439200 NCAPGQ9BPX3 1015 aa13.34□□□□□ -0.27
CHEK2-216ENST00000439200 NAA15Q9BXJ9 866 aaKnown RBP13.34□□□□□ -0.27
CHEK2-216ENST00000439200 RETREG1Q9H6L5 497 aa13.34□□□□□ -0.27
CHEK2-216ENST00000439200 PCDH12Q9NPG4 1184 aa13.34□□□□□ -0.27
CHEK2-216ENST00000439200 FOXJ2Q9P0K8 574 aa13.34□□□□□ -0.27
CHEK2-216ENST00000439200 LHX3Q9UBR4 397 aa13.34□□□□□ -0.27
CHEK2-216ENST00000439200 MFHAS1Q9Y4C4 1052 aa13.34□□□□□ -0.27
CHEK2-216ENST00000439200 PCDHGA4Q9Y5G9 962 aa13.34□□□□□ -0.27
CHEK2-216ENST00000439200 LRRK1Q38SD2 2015 aa13.34□□□□□ -0.27
CHEK2-216ENST00000439200 F8VZ95 297 aa13.33□□□□□ -0.28
CHEK2-216ENST00000439200 PRKCGP05129 697 aa13.33□□□□□ -0.28
CHEK2-216ENST00000439200 UCHL3P15374 230 aa13.33□□□□□ -0.28
CHEK2-216ENST00000439200 ITGB6P18564 788 aa13.33□□□□□ -0.28
CHEK2-216ENST00000439200 WT1P19544 449 aaPredicted RBP13.33□□□□□ -0.28
CHEK2-216ENST00000439200 LIG3P49916 1009 aa13.33□□□□□ -0.28
CHEK2-216ENST00000439200 MAPK10P53779 464 aa13.33□□□□□ -0.28
CHEK2-216ENST00000439200 HDAC4P56524 1084 aa13.33□□□□□ -0.28
CHEK2-216ENST00000439200 CYP4F2P78329 520 aa13.33□□□□□ -0.28
CHEK2-216ENST00000439200 INO80DQ53TQ3 878 aaPredicted RBP13.33□□□□□ -0.28
CHEK2-216ENST00000439200 CERCAMQ5T4B2 595 aa13.33□□□□□ -0.28
CHEK2-216ENST00000439200 TMPRSS9Q7Z410 1059 aa13.33□□□□□ -0.28
CHEK2-216ENST00000439200 SPRED1Q7Z699 444 aa13.33□□□□□ -0.28
CHEK2-216ENST00000439200 RTL3Q8N8U3 475 aaKnown RBP13.33□□□□□ -0.28
CHEK2-216ENST00000439200 PLA2G15Q8NCC3 412 aa13.33□□□□□ -0.28
CHEK2-216ENST00000439200 OR6C4Q8NGE1 309 aa13.33□□□□□ -0.28
CHEK2-216ENST00000439200 CASKIN2Q8WXE0 1202 aa13.33□□□□□ -0.28
CHEK2-216ENST00000439200 OR1E3Q8WZA6 343 aa13.33□□□□□ -0.28
CHEK2-216ENST00000439200 RBM15Q96T37 977 aaKnown RBP eCLIP13.33□□□□□ -0.28
CHEK2-216ENST00000439200 C11orf70Q9BRQ4 267 aa13.33□□□□□ -0.28
CHEK2-216ENST00000439200 TUBGCP2Q9BSJ2 902 aa13.33□□□□□ -0.28
CHEK2-216ENST00000439200 NOCTQ9UK39 431 aaKnown RBP13.33□□□□□ -0.28
CHEK2-216ENST00000439200 DAAM1Q9Y4D1 1078 aa13.33□□□□□ -0.28
CHEK2-216ENST00000439200 RNF215Q9Y6U7 377 aa13.33□□□□□ -0.28
CHEK2-216ENST00000439200 UTP20O75691 2785 aaKnown RBP13.33□□□□□ -0.28
CHEK2-216ENST00000439200 ANKRD36A6QL64 1941 aa13.33□□□□□ -0.28
CHEK2-216ENST00000439200 TSPAN11A1L157 253 aa13.32□□□□□ -0.28
CHEK2-216ENST00000439200 TMEM202A6NGA9 273 aa13.32□□□□□ -0.28
CHEK2-216ENST00000439200 B4DGG1 531 aa13.32□□□□□ -0.28
CHEK2-216ENST00000439200 C9orf172C9J069 976 aa13.32□□□□□ -0.28
CHEK2-216ENST00000439200 RASA4BC9J798 803 aa13.32□□□□□ -0.28
CHEK2-216ENST00000439200 RASA4O43374 803 aa13.32□□□□□ -0.28
CHEK2-216ENST00000439200 TNFP01375 233 aa13.32□□□□□ -0.28
CHEK2-216ENST00000439200 MMP8P22894 467 aa13.32□□□□□ -0.28
CHEK2-216ENST00000439200 EPHB2P29323 1055 aa13.32□□□□□ -0.28
CHEK2-216ENST00000439200 MMP12P39900 470 aa13.32□□□□□ -0.28
CHEK2-216ENST00000439200 PTPN9P43378 593 aa13.32□□□□□ -0.28
CHEK2-216ENST00000439200 SUOXP51687 545 aa13.32□□□□□ -0.28
CHEK2-216ENST00000439200 ZFP36L1Q07352 338 aaKnown RBP13.32□□□□□ -0.28
CHEK2-216ENST00000439200 CYTH1Q15438 398 aa13.32□□□□□ -0.28
CHEK2-216ENST00000439200 TBR1Q16650 682 aa13.32□□□□□ -0.28
CHEK2-216ENST00000439200 UGP2Q16851 508 aa13.32□□□□□ -0.28
CHEK2-216ENST00000439200 XKR5Q6UX68 686 aa13.32□□□□□ -0.28
CHEK2-216ENST00000439200 ATG14Q6ZNE5 492 aa13.32□□□□□ -0.28
CHEK2-216ENST00000439200 STRADAQ7RTN6 431 aa13.32□□□□□ -0.28
CHEK2-216ENST00000439200 TAF8Q7Z7C8 310 aa13.32□□□□□ -0.28
CHEK2-216ENST00000439200 ZSWIM9Q86XI8 627 aa13.32□□□□□ -0.28
CHEK2-216ENST00000439200 FAM46DQ8NEK8 389 aa13.32□□□□□ -0.28
CHEK2-216ENST00000439200 ATL2Q8NHH9 583 aa13.32□□□□□ -0.28
CHEK2-216ENST00000439200 SLC30A5Q8TAD4 765 aa13.32□□□□□ -0.28
CHEK2-216ENST00000439200 HTR3CQ8WXA8 447 aa13.32□□□□□ -0.28
CHEK2-216ENST00000439200 CENPIQ92674 756 aaPredicted RBP13.32□□□□□ -0.28
CHEK2-216ENST00000439200 USP7Q93009 1102 aa13.32□□□□□ -0.28
CHEK2-216ENST00000439200 SUV39H2Q9H5I1 410 aa13.32□□□□□ -0.28
CHEK2-216ENST00000439200 FGF22Q9HCT0 170 aa13.32□□□□□ -0.28
CHEK2-216ENST00000439200 MRPL40Q9NQ50 206 aaKnown RBP13.32□□□□□ -0.28
CHEK2-216ENST00000439200 SEPT10Q9P0V9 454 aa13.32□□□□□ -0.28
CHEK2-216ENST00000439200 APPL1Q9UKG1 709 aa13.32□□□□□ -0.28
CHEK2-216ENST00000439200 DGKBQ9Y6T7 804 aa13.32□□□□□ -0.28
CHEK2-216ENST00000439200 SUV39H1O43463 412 aa13.31□□□□□ -0.28
CHEK2-216ENST00000439200 BUB1BO60566 1050 aaPredicted RBP13.31□□□□□ -0.28
CHEK2-216ENST00000439200 GFPT2O94808 682 aa13.31□□□□□ -0.28
CHEK2-216ENST00000439200 CYP1A1P04798 512 aaPredicted RBP13.31□□□□□ -0.28
CHEK2-216ENST00000439200 GLB1P16278 677 aa13.31□□□□□ -0.28
CHEK2-216ENST00000439200 CHRNB2P17787 502 aa13.31□□□□□ -0.28
CHEK2-216ENST00000439200 FMO1Q01740 532 aa13.31□□□□□ -0.28
CHEK2-216ENST00000439200 MTM1Q13496 603 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms