RNA–Protein interactions for RNA: ENST00000434243.5

EDEM1-202, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2

Gene EDEM1, Length 978 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-202ENST00000434243 ZSWIM9Q86XI8 627 aa13.42□□□□□ -0.26
EDEM1-202ENST00000434243 HID1Q8IV36 788 aa13.42□□□□□ -0.26
EDEM1-202ENST00000434243 CACTIN-AS1Q8N1I8 211 aa13.42□□□□□ -0.26
EDEM1-202ENST00000434243 NSMCE1Q8WV22 266 aa13.42□□□□□ -0.26
EDEM1-202ENST00000434243 TSACCQ96A04 125 aaPredicted RBP13.42□□□□□ -0.26
EDEM1-202ENST00000434243 SCUBE2Q9NQ36 999 aa13.42□□□□□ -0.26
EDEM1-202ENST00000434243 SEPT3Q9UH03 358 aa13.42□□□□□ -0.26
EDEM1-202ENST00000434243 ANAPC7Q9UJX3 599 aa13.42□□□□□ -0.26
EDEM1-202ENST00000434243 OR1A2Q9Y585 309 aa13.42□□□□□ -0.26
EDEM1-202ENST00000434243 PCDHB1Q9Y5F3 818 aa13.42□□□□□ -0.26
EDEM1-202ENST00000434243 U3KQA8 63 aa13.42□□□□□ -0.26
EDEM1-202ENST00000434243 TP53BP1Q12888 1972 aaPredicted RBP13.41□□□□□ -0.26
EDEM1-202ENST00000434243 DOCK9Q9BZ29 2069 aa13.41□□□□□ -0.26
EDEM1-202ENST00000434243 CEP295Q9C0D2 2601 aa13.41□□□□□ -0.26
EDEM1-202ENST00000434243 A0A087WV48 116 aa13.41□□□□□ -0.26
EDEM1-202ENST00000434243 A0A1W2PQJ5 194 aa13.41□□□□□ -0.26
EDEM1-202ENST00000434243 TTC24A2A3L6 582 aaPredicted RBP13.41□□□□□ -0.26
EDEM1-202ENST00000434243 TMEM110-MUSTN1A8MSY1 372 aa13.41□□□□□ -0.26
EDEM1-202ENST00000434243 MUSKO15146 869 aa13.41□□□□□ -0.26
EDEM1-202ENST00000434243 RRP8O43159 456 aaKnown RBP13.41□□□□□ -0.26
EDEM1-202ENST00000434243 TLX3O43711 291 aaPredicted RBP13.41□□□□□ -0.26
EDEM1-202ENST00000434243 BRINP1O60477 761 aa13.41□□□□□ -0.26
EDEM1-202ENST00000434243 CSO75390 466 aaKnown RBP13.41□□□□□ -0.26
EDEM1-202ENST00000434243 RARAP10276 462 aa13.41□□□□□ -0.26
EDEM1-202ENST00000434243 TSHRP16473 764 aa13.41□□□□□ -0.26
EDEM1-202ENST00000434243 MMP12P39900 470 aa13.41□□□□□ -0.26
EDEM1-202ENST00000434243 ABCG1P45844 678 aa13.41□□□□□ -0.26
EDEM1-202ENST00000434243 PEX5P50542 639 aa13.41□□□□□ -0.26
EDEM1-202ENST00000434243 ZBED6P86452 979 aa13.41□□□□□ -0.26
EDEM1-202ENST00000434243 NSUN2Q08J23 767 aaKnown RBP eCLIP13.41□□□□□ -0.26
EDEM1-202ENST00000434243 SLC10A7Q0GE19 358 aa13.41□□□□□ -0.26
EDEM1-202ENST00000434243 KRT81Q14533 505 aa13.41□□□□□ -0.26
EDEM1-202ENST00000434243 DPYSL2Q16555 572 aa13.41□□□□□ -0.26
EDEM1-202ENST00000434243 CCDC122Q5T0U0 273 aa13.41□□□□□ -0.26
EDEM1-202ENST00000434243 TMCO4Q5TGY1 634 aa13.41□□□□□ -0.26
EDEM1-202ENST00000434243 HGSNATQ68CP4 663 aa13.41□□□□□ -0.26
EDEM1-202ENST00000434243 ESRP1Q6NXG1 681 aaKnown RBP13.41□□□□□ -0.26
EDEM1-202ENST00000434243 POLNQ7Z5Q5 900 aa13.41□□□□□ -0.26
EDEM1-202ENST00000434243 BBS5Q8N3I7 341 aa13.41□□□□□ -0.26
EDEM1-202ENST00000434243 PDCD6IPQ8WUM4 868 aaKnown RBP13.41□□□□□ -0.26
EDEM1-202ENST00000434243 SCG3Q8WXD2 468 aaKnown RBP13.41□□□□□ -0.26
EDEM1-202ENST00000434243 SYN2Q92777 582 aaPredicted RBP13.41□□□□□ -0.26
EDEM1-202ENST00000434243 APOOQ9BUR5 198 aa13.41□□□□□ -0.26
EDEM1-202ENST00000434243 LRRC61Q9BV99 259 aa13.41□□□□□ -0.26
EDEM1-202ENST00000434243 NUP85Q9BW27 656 aa13.41□□□□□ -0.26
EDEM1-202ENST00000434243 SYNDIG1Q9H7V2 258 aa13.41□□□□□ -0.26
EDEM1-202ENST00000434243 IFNKQ9P0W0 207 aa13.41□□□□□ -0.26
EDEM1-202ENST00000434243 SIRPGQ9P1W8 387 aa13.41□□□□□ -0.26
EDEM1-202ENST00000434243 GULP1Q9UBP9 304 aa13.41□□□□□ -0.26
EDEM1-202ENST00000434243 KLQ9UEF7 1012 aa13.41□□□□□ -0.26
EDEM1-202ENST00000434243 IP6K2Q9UHH9 426 aa13.41□□□□□ -0.26
EDEM1-202ENST00000434243 PNMA8BQ9ULN7 279 aaPredicted RBP13.41□□□□□ -0.26
EDEM1-202ENST00000434243 LUC7L2Q9Y383 392 aaKnown RBP13.41□□□□□ -0.26
EDEM1-202ENST00000434243 ZFHX4Q86UP3 3567 aa13.41□□□□□ -0.26
EDEM1-202ENST00000434243 FRYQ5TBA9 3013 aa13.41□□□□□ -0.26
EDEM1-202ENST00000434243 EME2A4GXA9 379 aaPredicted RBP13.4□□□□□ -0.26
EDEM1-202ENST00000434243 YY2O15391 372 aa13.4□□□□□ -0.26
EDEM1-202ENST00000434243 USP12O75317 370 aa13.4□□□□□ -0.26
EDEM1-202ENST00000434243 RECQL5O94762 991 aaPredicted RBP13.4□□□□□ -0.26
EDEM1-202ENST00000434243 RASGRP1O95267 797 aa13.4□□□□□ -0.26
EDEM1-202ENST00000434243 MPOP05164 745 aa13.4□□□□□ -0.26
EDEM1-202ENST00000434243 ELFN1P0C7U0 828 aa13.4□□□□□ -0.26
EDEM1-202ENST00000434243 HOXB3P14651 431 aaPredicted RBP13.4□□□□□ -0.26
EDEM1-202ENST00000434243 TGM2P21980 687 aa13.4□□□□□ -0.26
EDEM1-202ENST00000434243 ACTN2P35609 894 aa13.4□□□□□ -0.26
EDEM1-202ENST00000434243 GJC1P36383 396 aa13.4□□□□□ -0.26
EDEM1-202ENST00000434243 HK3P52790 923 aa13.4□□□□□ -0.26
EDEM1-202ENST00000434243 AP1S1P61966 158 aa13.4□□□□□ -0.26
EDEM1-202ENST00000434243 NFATC4Q14934 902 aa13.4□□□□□ -0.26
EDEM1-202ENST00000434243 ALG11Q2TAA5 492 aa13.4□□□□□ -0.26
EDEM1-202ENST00000434243 C6orf132Q5T0Z8 1188 aa13.4□□□□□ -0.26
EDEM1-202ENST00000434243 CDCP2Q5VXM1 449 aa13.4□□□□□ -0.26
EDEM1-202ENST00000434243 ALKBH5Q6P6C2 394 aaKnown RBP13.4□□□□□ -0.26
EDEM1-202ENST00000434243 FSTL5Q8N475 847 aaPredicted RBP13.4□□□□□ -0.26
EDEM1-202ENST00000434243 ATPAF2Q8N5M1 289 aa13.4□□□□□ -0.26
EDEM1-202ENST00000434243 ATL2Q8NHH9 583 aa13.4□□□□□ -0.26
EDEM1-202ENST00000434243 FGF11Q92914 225 aa13.4□□□□□ -0.26
EDEM1-202ENST00000434243 ZNF599Q96NL3 588 aa13.4□□□□□ -0.26
EDEM1-202ENST00000434243 CSPG4P5Q96PW8 444 aa13.4□□□□□ -0.26
EDEM1-202ENST00000434243 PSKH2Q96QS6 385 aa13.4□□□□□ -0.26
EDEM1-202ENST00000434243 CLPBQ9H078 707 aa13.4□□□□□ -0.26
EDEM1-202ENST00000434243 ETNK2Q9NVF9 386 aa13.4□□□□□ -0.26
EDEM1-202ENST00000434243 CAPN11Q9UMQ6 739 aa13.4□□□□□ -0.26
EDEM1-202ENST00000434243 PCDHGC4Q9Y5F7 938 aa13.4□□□□□ -0.26
EDEM1-202ENST00000434243 IGF2RP11717 2491 aa13.4□□□□□ -0.26
EDEM1-202ENST00000434243 TRPM6Q9BX84 2022 aa13.4□□□□□ -0.26
EDEM1-202ENST00000434243 A0A087X0T9 212 aa13.39□□□□□ -0.27
EDEM1-202ENST00000434243 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.39□□□□□ -0.27
EDEM1-202ENST00000434243 LMO7DNF2Z398 122 aa13.39□□□□□ -0.27
EDEM1-202ENST00000434243 MYO1FO00160 1098 aa13.39□□□□□ -0.27
EDEM1-202ENST00000434243 CACNB4O00305 520 aaPredicted RBP13.39□□□□□ -0.27
EDEM1-202ENST00000434243 TNFP01375 233 aa13.39□□□□□ -0.27
EDEM1-202ENST00000434243 CELA2BP08218 269 aaPredicted RBP13.39□□□□□ -0.27
EDEM1-202ENST00000434243 ALPIP09923 528 aa13.39□□□□□ -0.27
EDEM1-202ENST00000434243 FAM228BP0C875 321 aa13.39□□□□□ -0.27
EDEM1-202ENST00000434243 ITPKBP27987 946 aa13.39□□□□□ -0.27
EDEM1-202ENST00000434243 SERPINB6P35237 376 aa13.39□□□□□ -0.27
EDEM1-202ENST00000434243 PBX1P40424 430 aa13.39□□□□□ -0.27
EDEM1-202ENST00000434243 EIF2S3P41091 472 aaKnown RBP13.39□□□□□ -0.27
EDEM1-202ENST00000434243 CDH6P55285 790 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms