RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 AREL1O15033 823 aa30.77■■■□□ 2.52
CSNK1E-206ENST00000413574 CA4P22748 312 aa30.77■■■□□ 2.52
CSNK1E-206ENST00000413574 ACTN2P35609 894 aa30.77■■■□□ 2.52
CSNK1E-206ENST00000413574 POLR2LP62875 67 aaKnown RBP30.77■■■□□ 2.52
CSNK1E-206ENST00000413574 CDK18Q07002 472 aa30.77■■■□□ 2.52
CSNK1E-206ENST00000413574 SIM2Q14190 667 aaPredicted RBP30.77■■■□□ 2.52
CSNK1E-206ENST00000413574 SLC14A2Q15849 920 aa30.77■■■□□ 2.52
CSNK1E-206ENST00000413574 SPOCK2Q92563 424 aa30.77■■■□□ 2.52
CSNK1E-206ENST00000413574 IFT43Q96FT9 208 aa30.77■■■□□ 2.52
CSNK1E-206ENST00000413574 DUSP15Q9H1R2 295 aaPredicted RBP30.77■■■□□ 2.52
CSNK1E-206ENST00000413574 VPS45Q9NRW7 570 aa30.77■■■□□ 2.52
CSNK1E-206ENST00000413574 PHTF1Q9UMS5 762 aa30.77■■■□□ 2.52
CSNK1E-206ENST00000413574 RIOK3O14730 519 aaKnown RBP30.76■■■□□ 2.52
CSNK1E-206ENST00000413574 ANXA9O76027 345 aa30.76■■■□□ 2.52
CSNK1E-206ENST00000413574 ALPIP09923 528 aa30.76■■■□□ 2.52
CSNK1E-206ENST00000413574 GEMP55040 296 aa30.76■■■□□ 2.52
CSNK1E-206ENST00000413574 FAM193AP78312 1265 aa30.76■■■□□ 2.52
CSNK1E-206ENST00000413574 MPP3Q13368 585 aa30.76■■■□□ 2.52
CSNK1E-206ENST00000413574 PRPSAP1Q14558 356 aa30.76■■■□□ 2.52
CSNK1E-206ENST00000413574 LPAL2Q16609 132 aa30.76■■■□□ 2.52
CSNK1E-206ENST00000413574 PRR23BQ6ZRT6 265 aa30.76■■■□□ 2.52
CSNK1E-206ENST00000413574 OR2T34Q8NGX1 318 aa30.76■■■□□ 2.52
CSNK1E-206ENST00000413574 RAB7BQ96AH8 199 aa30.76■■■□□ 2.52
CSNK1E-206ENST00000413574 KCNH6Q9H252 994 aa30.76■■■□□ 2.52
CSNK1E-206ENST00000413574 PAK5Q9P286 719 aa30.76■■■□□ 2.52
CSNK1E-206ENST00000413574 HCN4Q9Y3Q4 1203 aa30.76■■■□□ 2.52
CSNK1E-206ENST00000413574 A0A0U1RQS6 177 aa30.76■■■□□ 2.51
CSNK1E-206ENST00000413574 LRRC72A6NJI9 287 aa30.76■■■□□ 2.51
CSNK1E-206ENST00000413574 ESPNB1AK53 854 aa30.76■■■□□ 2.51
CSNK1E-206ENST00000413574 PCDH8O95206 1070 aa30.76■■■□□ 2.51
CSNK1E-206ENST00000413574 VPS41P49754 854 aa30.76■■■□□ 2.51
CSNK1E-206ENST00000413574 EPHB1P54762 984 aa30.76■■■□□ 2.51
CSNK1E-206ENST00000413574 PPP2CBP62714 309 aa30.76■■■□□ 2.51
CSNK1E-206ENST00000413574 PPP2CAP67775 309 aa30.76■■■□□ 2.51
CSNK1E-206ENST00000413574 LMNB2Q03252 620 aa30.76■■■□□ 2.51
CSNK1E-206ENST00000413574 SPARCL1Q14515 664 aa30.76■■■□□ 2.51
CSNK1E-206ENST00000413574 PLK5Q496M5 336 aa30.76■■■□□ 2.51
CSNK1E-206ENST00000413574 ZC3H14Q6PJT7 736 aaKnown RBP30.76■■■□□ 2.51
CSNK1E-206ENST00000413574 ARMCX6Q7L4S7 300 aa30.76■■■□□ 2.51
CSNK1E-206ENST00000413574 SPATA4Q8NEY3 305 aa30.76■■■□□ 2.51
CSNK1E-206ENST00000413574 ETNK1Q9HBU6 452 aa30.76■■■□□ 2.51
CSNK1E-206ENST00000413574 AAR2Q9Y312 384 aaKnown RBP30.76■■■□□ 2.51
CSNK1E-206ENST00000413574 TRPM6Q9BX84 2022 aa30.75■■■□□ 2.51
CSNK1E-206ENST00000413574 A0A1W2PQ67 120 aa30.75■■■□□ 2.51
CSNK1E-206ENST00000413574 NEMP1O14524 444 aa30.75■■■□□ 2.51
CSNK1E-206ENST00000413574 AP1G1O43747 822 aa30.75■■■□□ 2.51
CSNK1E-206ENST00000413574 AGTP01019 485 aa30.75■■■□□ 2.51
CSNK1E-206ENST00000413574 KRT14P02533 472 aa30.75■■■□□ 2.51
CSNK1E-206ENST00000413574 CHRNA4P43681 627 aa30.75■■■□□ 2.51
CSNK1E-206ENST00000413574 C2orf54Q08AI8 447 aa30.75■■■□□ 2.51
CSNK1E-206ENST00000413574 SLC41A1Q8IVJ1 513 aa30.75■■■□□ 2.51
CSNK1E-206ENST00000413574 RMDN1Q96DB5 314 aa30.75■■■□□ 2.51
CSNK1E-206ENST00000413574 RAB6BQ9NRW1 208 aa30.75■■■□□ 2.51
CSNK1E-206ENST00000413574 NEU2Q9Y3R4 380 aa30.75■■■□□ 2.51
CSNK1E-206ENST00000413574 CCDC188H7C350 402 aa30.74■■■□□ 2.51
CSNK1E-206ENST00000413574 PMS2CLQ68D20 193 aa30.74■■■□□ 2.51
CSNK1E-206ENST00000413574 ERAP2Q6P179 960 aa30.74■■■□□ 2.51
CSNK1E-206ENST00000413574 SLC25A41Q8N5S1 370 aa30.74■■■□□ 2.51
CSNK1E-206ENST00000413574 PDCD7Q8N8D1 485 aaKnown RBP30.74■■■□□ 2.51
CSNK1E-206ENST00000413574 FEM1CQ96JP0 617 aa30.74■■■□□ 2.51
CSNK1E-206ENST00000413574 APOL2Q9BQE5 337 aa30.74■■■□□ 2.51
CSNK1E-206ENST00000413574 WRAP53Q9BUR4 548 aaKnown RBP30.74■■■□□ 2.51
CSNK1E-206ENST00000413574 FICDQ9BVA6 458 aa30.74■■■□□ 2.51
CSNK1E-206ENST00000413574 KDM4CQ9H3R0 1056 aa30.74■■■□□ 2.51
CSNK1E-206ENST00000413574 B4GALT6Q9UBX8 382 aa30.74■■■□□ 2.51
CSNK1E-206ENST00000413574 MRFAP1Q9Y605 127 aa30.74■■■□□ 2.51
CSNK1E-206ENST00000413574 GON4LQ3T8J9 2241 aa30.74■■■□□ 2.51
CSNK1E-206ENST00000413574 WDR87Q6ZQQ6 2873 aa30.74■■■□□ 2.51
CSNK1E-206ENST00000413574 LOC285095A0A1B0GVY8 99 aa30.73■■■□□ 2.51
CSNK1E-206ENST00000413574 RNGTTO60942 597 aaKnown RBP30.73■■■□□ 2.51
CSNK1E-206ENST00000413574 USP12O75317 370 aa30.73■■■□□ 2.51
CSNK1E-206ENST00000413574 FSBPO95073 299 aa30.73■■■□□ 2.51
CSNK1E-206ENST00000413574 MAT2AP31153 395 aaKnown RBP30.73■■■□□ 2.51
CSNK1E-206ENST00000413574 HNF1BP35680 557 aa30.73■■■□□ 2.51
CSNK1E-206ENST00000413574 MMP12P39900 470 aa30.73■■■□□ 2.51
CSNK1E-206ENST00000413574 PTGER3P43115 390 aa30.73■■■□□ 2.51
CSNK1E-206ENST00000413574 TERF1P54274 439 aa30.73■■■□□ 2.51
CSNK1E-206ENST00000413574 QPCTQ16769 361 aa30.73■■■□□ 2.51
CSNK1E-206ENST00000413574 SEL1L3Q68CR1 1132 aa30.73■■■□□ 2.51
CSNK1E-206ENST00000413574 LPCAT2Q7L5N7 544 aa30.73■■■□□ 2.51
CSNK1E-206ENST00000413574 GRK7Q8WTQ7 553 aa30.73■■■□□ 2.51
CSNK1E-206ENST00000413574 HSPA12BQ96MM6 686 aa30.73■■■□□ 2.51
CSNK1E-206ENST00000413574 KRT12Q99456 494 aa30.73■■■□□ 2.51
CSNK1E-206ENST00000413574 FSD1LQ9BXM9 530 aa30.73■■■□□ 2.51
CSNK1E-206ENST00000413574 ADGRE3Q9BY15 652 aa30.73■■■□□ 2.51
CSNK1E-206ENST00000413574 PREBQ9HCU5 417 aa30.73■■■□□ 2.51
CSNK1E-206ENST00000413574 PCYOX1Q9UHG3 505 aa30.73■■■□□ 2.51
CSNK1E-206ENST00000413574 ZFR2Q9UPR6 939 aaKnown RBP30.73■■■□□ 2.51
CSNK1E-206ENST00000413574 ARIH1Q9Y4X5 557 aaPredicted RBP30.73■■■□□ 2.51
CSNK1E-206ENST00000413574 TNRC6BQ9UPQ9 1833 aaKnown RBP30.73■■■□□ 2.51
CSNK1E-206ENST00000413574 A0A0J9YYE9 177 aa30.73■■■□□ 2.51
CSNK1E-206ENST00000413574 A0A1W2PQU0 124 aa30.73■■■□□ 2.51
CSNK1E-206ENST00000413574 NPIPB15A6NHN6 443 aaPredicted RBP30.73■■■□□ 2.51
CSNK1E-206ENST00000413574 ANKRD66B4E2M5 251 aa30.73■■■□□ 2.51
CSNK1E-206ENST00000413574 ZNF500O60304 480 aaPredicted RBP30.73■■■□□ 2.51
CSNK1E-206ENST00000413574 ECEL1O95672 775 aa30.73■■■□□ 2.51
CSNK1E-206ENST00000413574 TRBC1P01850 177 aa30.73■■■□□ 2.51
CSNK1E-206ENST00000413574 ATXN1LP0C7T5 689 aaKnown RBP30.73■■■□□ 2.51
CSNK1E-206ENST00000413574 PTGIRP43119 386 aa30.73■■■□□ 2.51
CSNK1E-206ENST00000413574 SUOXP51687 545 aa30.73■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms