RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 CASD1Q96PB1 797 aa15.49■□□□□ 0.07
CPSF7-202ENST00000394888 MRPL46Q9H2W6 279 aaKnown RBP15.49■□□□□ 0.07
CPSF7-202ENST00000394888 POMKQ9H5K3 350 aa15.49■□□□□ 0.07
CPSF7-202ENST00000394888 SUFUQ9UMX1 484 aa15.49■□□□□ 0.07
CPSF7-202ENST00000394888 LTBP2Q14767 1821 aa15.49■□□□□ 0.07
CPSF7-202ENST00000394888 LUC7L3O95232 432 aaKnown RBP15.49■□□□□ 0.07
CPSF7-202ENST00000394888 HNRNPLP14866 589 aaKnown RBP eCLIP15.49■□□□□ 0.07
CPSF7-202ENST00000394888 XRCC1P18887 633 aaPredicted RBP15.49■□□□□ 0.07
CPSF7-202ENST00000394888 FGFR3P22607 806 aa15.49■□□□□ 0.07
CPSF7-202ENST00000394888 PPARGP37231 505 aaPredicted RBP15.49■□□□□ 0.07
CPSF7-202ENST00000394888 GRIA2P42262 883 aa15.49■□□□□ 0.07
CPSF7-202ENST00000394888 CD151P48509 253 aa15.49■□□□□ 0.07
CPSF7-202ENST00000394888 ACLYP53396 1101 aa15.49■□□□□ 0.07
CPSF7-202ENST00000394888 INHBEP58166 350 aa15.49■□□□□ 0.07
CPSF7-202ENST00000394888 TRIM67Q6ZTA4 783 aa15.49■□□□□ 0.07
CPSF7-202ENST00000394888 THEM5Q8N1Q8 247 aa15.49■□□□□ 0.07
CPSF7-202ENST00000394888 KLHL32Q96NJ5 620 aa15.49■□□□□ 0.07
CPSF7-202ENST00000394888 MRPL57Q9BQC6 102 aaKnown RBP15.49■□□□□ 0.07
CPSF7-202ENST00000394888 ZBED2Q9BTP6 218 aa15.49■□□□□ 0.07
CPSF7-202ENST00000394888 CCDC28BQ9BUN5 200 aa15.49■□□□□ 0.07
CPSF7-202ENST00000394888 ZYG11BQ9C0D3 744 aa15.49■□□□□ 0.07
CPSF7-202ENST00000394888 NT5MQ9NPB1 228 aa15.49■□□□□ 0.07
CPSF7-202ENST00000394888 SLC22A2O15244 555 aa15.48■□□□□ 0.07
CPSF7-202ENST00000394888 FKBP6O75344 327 aa15.48■□□□□ 0.07
CPSF7-202ENST00000394888 MTHFD2P13995 350 aa15.48■□□□□ 0.07
CPSF7-202ENST00000394888 HDCP19113 662 aa15.48■□□□□ 0.07
CPSF7-202ENST00000394888 PSMD8P48556 350 aa15.48■□□□□ 0.07
CPSF7-202ENST00000394888 PRKAA1Q13131 559 aa15.48■□□□□ 0.07
CPSF7-202ENST00000394888 EML3Q32P44 896 aa15.48■□□□□ 0.07
CPSF7-202ENST00000394888 OGFRL1Q5TC84 451 aaPredicted RBP15.48■□□□□ 0.07
CPSF7-202ENST00000394888 MFSD14CQ5VZR4 134 aa15.48■□□□□ 0.07
CPSF7-202ENST00000394888 ARMC3Q5W041 872 aa15.48■□□□□ 0.07
CPSF7-202ENST00000394888 RNF19BQ6ZMZ0 732 aa15.48■□□□□ 0.07
CPSF7-202ENST00000394888 KIAA0408Q6ZU52 694 aa15.48■□□□□ 0.07
CPSF7-202ENST00000394888 CATSPER2Q96P56 530 aa15.48■□□□□ 0.07
CPSF7-202ENST00000394888 RIMS3Q9UJD0 308 aa15.48■□□□□ 0.07
CPSF7-202ENST00000394888 A0A087X1B8 175 aa15.48■□□□□ 0.07
CPSF7-202ENST00000394888 NBNO60934 754 aa15.48■□□□□ 0.07
CPSF7-202ENST00000394888 SGSHP51688 502 aa15.48■□□□□ 0.07
CPSF7-202ENST00000394888 LHX8Q68G74 356 aa15.48■□□□□ 0.07
CPSF7-202ENST00000394888 SLC24A5Q71RS6 500 aa15.48■□□□□ 0.07
CPSF7-202ENST00000394888 LRRC49Q8IUZ0 686 aa15.48■□□□□ 0.07
CPSF7-202ENST00000394888 RCN3Q96D15 328 aa15.48■□□□□ 0.07
CPSF7-202ENST00000394888 ELMO2Q96JJ3 720 aa15.48■□□□□ 0.07
CPSF7-202ENST00000394888 C3orf30Q96M34 536 aa15.48■□□□□ 0.07
CPSF7-202ENST00000394888 SMIM14Q96QK8 99 aa15.48■□□□□ 0.07
CPSF7-202ENST00000394888 MFSD1Q9H3U5 465 aa15.48■□□□□ 0.07
CPSF7-202ENST00000394888 SARDHQ9UL12 918 aa15.48■□□□□ 0.07
CPSF7-202ENST00000394888 PCDHGA7Q9Y5G6 932 aa15.48■□□□□ 0.07
CPSF7-202ENST00000394888 H3BMM5 538 aa15.48■□□□□ 0.07
CPSF7-202ENST00000394888 RPLP2P05387 115 aaKnown RBP15.48■□□□□ 0.07
CPSF7-202ENST00000394888 RGRP47804 291 aa15.48■□□□□ 0.07
CPSF7-202ENST00000394888 EPHB1P54762 984 aa15.48■□□□□ 0.07
CPSF7-202ENST00000394888 AQP4P55087 323 aa15.48■□□□□ 0.07
CPSF7-202ENST00000394888 TBX4P57082 545 aa15.48■□□□□ 0.07
CPSF7-202ENST00000394888 HERC3Q15034 1050 aa15.48■□□□□ 0.07
CPSF7-202ENST00000394888 PHYKPLQ8IUZ5 450 aa15.48■□□□□ 0.07
CPSF7-202ENST00000394888 TUBGCP5Q96RT8 1024 aa15.48■□□□□ 0.07
CPSF7-202ENST00000394888 TTC1Q99614 292 aa15.48■□□□□ 0.07
CPSF7-202ENST00000394888 UBE2OQ9C0C9 1292 aaKnown RBP15.48■□□□□ 0.07
CPSF7-202ENST00000394888 CCSER2Q9H7U1 834 aa15.48■□□□□ 0.07
CPSF7-202ENST00000394888 PIDD1Q9HB75 910 aa15.48■□□□□ 0.07
CPSF7-202ENST00000394888 SLC52A3Q9NQ40 469 aa15.48■□□□□ 0.07
CPSF7-202ENST00000394888 RGSL1A5PLK6 1076 aa15.47■□□□□ 0.07
CPSF7-202ENST00000394888 PPP6CO00743 305 aa15.47■□□□□ 0.07
CPSF7-202ENST00000394888 SERPINH1P50454 418 aaKnown RBP15.47■□□□□ 0.07
CPSF7-202ENST00000394888 INHBCP55103 352 aa15.47■□□□□ 0.07
CPSF7-202ENST00000394888 TRIP4Q15650 581 aaPredicted RBP15.47■□□□□ 0.07
CPSF7-202ENST00000394888 HECTD2Q5U5R9 776 aa15.47■□□□□ 0.07
CPSF7-202ENST00000394888 SCN4BQ8IWT1 228 aa15.47■□□□□ 0.07
CPSF7-202ENST00000394888 VN1R3Q9BXE9 311 aa15.47■□□□□ 0.07
CPSF7-202ENST00000394888 STK39Q9UEW8 545 aa15.47■□□□□ 0.07
CPSF7-202ENST00000394888 ARL5AQ9Y689 179 aa15.47■□□□□ 0.07
CPSF7-202ENST00000394888 MTMR11A4FU01 709 aa15.47■□□□□ 0.07
CPSF7-202ENST00000394888 FDXRP22570 491 aa15.47■□□□□ 0.07
CPSF7-202ENST00000394888 RTP2Q5QGT7 225 aa15.47■□□□□ 0.07
CPSF7-202ENST00000394888 RAP1GAP2Q684P5 730 aa15.47■□□□□ 0.07
CPSF7-202ENST00000394888 STMN2Q93045 179 aa15.47■□□□□ 0.07
CPSF7-202ENST00000394888 VOPP1Q96AW1 172 aa15.47■□□□□ 0.07
CPSF7-202ENST00000394888 SGF29Q96ES7 293 aa15.47■□□□□ 0.07
CPSF7-202ENST00000394888 PRICKLE1Q96MT3 831 aaPredicted RBP15.47■□□□□ 0.07
CPSF7-202ENST00000394888 ARHGAP26Q9UNA1 814 aa15.47■□□□□ 0.07
CPSF7-202ENST00000394888 A0A0D9SEW6 157 aa15.47■□□□□ 0.07
CPSF7-202ENST00000394888 MSX2P35548 267 aaPredicted RBP15.47■□□□□ 0.07
CPSF7-202ENST00000394888 FCGRTP55899 365 aa15.47■□□□□ 0.07
CPSF7-202ENST00000394888 AP2B1P63010 937 aa15.47■□□□□ 0.07
CPSF7-202ENST00000394888 KLC1Q07866 573 aa15.47■□□□□ 0.07
CPSF7-202ENST00000394888 GRM2Q14416 872 aa15.47■□□□□ 0.07
CPSF7-202ENST00000394888 CCDC124Q96CT7 223 aaKnown RBP15.47■□□□□ 0.07
CPSF7-202ENST00000394888 L3HYPDHQ96EM0 354 aa15.47■□□□□ 0.07
CPSF7-202ENST00000394888 MOXD2PA6NHM9 499 aa15.46■□□□□ 0.07
CPSF7-202ENST00000394888 ADAM12O43184 909 aa15.46■□□□□ 0.07
CPSF7-202ENST00000394888 CD160O95971 181 aa15.46■□□□□ 0.07
CPSF7-202ENST00000394888 F11P03951 625 aa15.46■□□□□ 0.07
CPSF7-202ENST00000394888 MYCNP04198 464 aaPredicted RBP15.46■□□□□ 0.07
CPSF7-202ENST00000394888 MRPS35P82673 323 aaKnown RBP15.46■□□□□ 0.07
CPSF7-202ENST00000394888 LRP8Q14114 963 aa15.46■□□□□ 0.07
CPSF7-202ENST00000394888 PDCD2Q16342 344 aaPredicted RBP15.46■□□□□ 0.07
CPSF7-202ENST00000394888 TMEM154Q6P9G4 183 aa15.46■□□□□ 0.07
CPSF7-202ENST00000394888 RP9Q8TA86 221 aaKnown RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms