RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 PELI3Q8N2H9 469 aa17.18■□□□□ 0.34
BRCC3-202ENST00000340647 LZTR1Q8N653 840 aa17.18■□□□□ 0.34
BRCC3-202ENST00000340647 FAM181AQ8N9Y4 354 aa17.18■□□□□ 0.34
BRCC3-202ENST00000340647 CXorf40AQ8TE69 158 aa17.18■□□□□ 0.34
BRCC3-202ENST00000340647 IQCDQ96DY2 449 aa17.18■□□□□ 0.34
BRCC3-202ENST00000340647 CHP1Q99653 195 aa17.18■□□□□ 0.34
BRCC3-202ENST00000340647 NCAPGQ9BPX3 1015 aa17.18■□□□□ 0.34
BRCC3-202ENST00000340647 CLPBQ9H078 707 aa17.18■□□□□ 0.34
BRCC3-202ENST00000340647 SP110Q9HB58 689 aa17.18■□□□□ 0.34
BRCC3-202ENST00000340647 NLGN3Q9NZ94 848 aa17.18■□□□□ 0.34
BRCC3-202ENST00000340647 IP6K2Q9UHH9 426 aa17.18■□□□□ 0.34
BRCC3-202ENST00000340647 CELA2BP08218 269 aaPredicted RBP17.17■□□□□ 0.34
BRCC3-202ENST00000340647 CKMT1AP12532 417 aa17.17■□□□□ 0.34
BRCC3-202ENST00000340647 JUNDP17535 347 aa17.17■□□□□ 0.34
BRCC3-202ENST00000340647 LIG3P49916 1009 aa17.17■□□□□ 0.34
BRCC3-202ENST00000340647 SUOXP51687 545 aa17.17■□□□□ 0.34
BRCC3-202ENST00000340647 HNRNPKP61978 463 aaKnown RBP eCLIP17.17■□□□□ 0.34
BRCC3-202ENST00000340647 CYP4F3Q08477 520 aa17.17■□□□□ 0.34
BRCC3-202ENST00000340647 TARDBPQ13148 414 aaKnown RBP eCLIP17.17■□□□□ 0.34
BRCC3-202ENST00000340647 ILKQ13418 452 aa17.17■□□□□ 0.34
BRCC3-202ENST00000340647 RFTN1Q14699 578 aaPredicted RBP17.17■□□□□ 0.34
BRCC3-202ENST00000340647 LBRQ14739 615 aaKnown RBP17.17■□□□□ 0.34
BRCC3-202ENST00000340647 GRM3Q14832 879 aa17.17■□□□□ 0.34
BRCC3-202ENST00000340647 PTPRRQ15256 657 aa17.17■□□□□ 0.34
BRCC3-202ENST00000340647 NFKBIBQ15653 356 aa17.17■□□□□ 0.34
BRCC3-202ENST00000340647 BRAT1Q6PJG6 821 aa17.17■□□□□ 0.34
BRCC3-202ENST00000340647 C19orf48Q6RUI8 117 aa17.17■□□□□ 0.34
BRCC3-202ENST00000340647 IGSF10Q6WRI0 2623 aa17.17■□□□□ 0.34
BRCC3-202ENST00000340647 PLA2G15Q8NCC3 412 aa17.17■□□□□ 0.34
BRCC3-202ENST00000340647 SPOCK2Q92563 424 aa17.17■□□□□ 0.34
BRCC3-202ENST00000340647 CINPQ9BW66 212 aaPredicted RBP17.17■□□□□ 0.34
BRCC3-202ENST00000340647 CCDC86Q9H6F5 360 aaKnown RBP17.17■□□□□ 0.34
BRCC3-202ENST00000340647 ATP8A1Q9Y2Q0 1164 aa17.17■□□□□ 0.34
BRCC3-202ENST00000340647 BPTFQ12830 3046 aa17.16■□□□□ 0.34
BRCC3-202ENST00000340647 HTRA2O43464 458 aaPredicted RBP17.16■□□□□ 0.34
BRCC3-202ENST00000340647 SCNN1BP51168 640 aa17.16■□□□□ 0.34
BRCC3-202ENST00000340647 YPEL5P62699 121 aa17.16■□□□□ 0.34
BRCC3-202ENST00000340647 ELP6Q0PNE2 266 aa17.16■□□□□ 0.34
BRCC3-202ENST00000340647 DPYSL3Q14195 570 aa17.16■□□□□ 0.34
BRCC3-202ENST00000340647 SLC18A3Q16572 532 aa17.16■□□□□ 0.34
BRCC3-202ENST00000340647 TMCO4Q5TGY1 634 aa17.16■□□□□ 0.34
BRCC3-202ENST00000340647 CDCP2Q5VXM1 449 aa17.16■□□□□ 0.34
BRCC3-202ENST00000340647 TMCO3Q6UWJ1 677 aa17.16■□□□□ 0.34
BRCC3-202ENST00000340647 LIPIQ6XZB0 460 aa17.16■□□□□ 0.34
BRCC3-202ENST00000340647 VSTM4Q8IW00 320 aa17.16■□□□□ 0.34
BRCC3-202ENST00000340647 CBARPQ8N350 705 aaPredicted RBP17.16■□□□□ 0.34
BRCC3-202ENST00000340647 PCDH19Q8TAB3 1148 aa17.16■□□□□ 0.34
BRCC3-202ENST00000340647 ZNF564Q8TBZ8 553 aaPredicted RBP17.16■□□□□ 0.34
BRCC3-202ENST00000340647 ZNF599Q96NL3 588 aa17.16■□□□□ 0.34
BRCC3-202ENST00000340647 MGME1Q9BQP7 344 aa17.16■□□□□ 0.34
BRCC3-202ENST00000340647 LRRC61Q9BV99 259 aa17.16■□□□□ 0.34
BRCC3-202ENST00000340647 PCDHGC4Q9Y5F7 938 aa17.16■□□□□ 0.34
BRCC3-202ENST00000340647 CSNK1G3Q9Y6M4 447 aa17.16■□□□□ 0.34
BRCC3-202ENST00000340647 MYO1FO00160 1098 aa17.15■□□□□ 0.34
BRCC3-202ENST00000340647 AQP9O43315 295 aa17.15■□□□□ 0.34
BRCC3-202ENST00000340647 MFSD11O43934 449 aa17.15■□□□□ 0.34
BRCC3-202ENST00000340647 PROSCO94903 275 aa17.15■□□□□ 0.34
BRCC3-202ENST00000340647 ARL4AP40617 200 aa17.15■□□□□ 0.34
BRCC3-202ENST00000340647 CDH6P55285 790 aa17.15■□□□□ 0.34
BRCC3-202ENST00000340647 MAXP61244 160 aa17.15■□□□□ 0.34
BRCC3-202ENST00000340647 TRAF2Q12933 501 aa17.15■□□□□ 0.34
BRCC3-202ENST00000340647 C1orf61Q13536 156 aa17.15■□□□□ 0.34
BRCC3-202ENST00000340647 LRRC14Q15048 493 aa17.15■□□□□ 0.34
BRCC3-202ENST00000340647 NCBP2-AS2Q69YL0 99 aa17.15■□□□□ 0.34
BRCC3-202ENST00000340647 SPECC1LQ69YQ0 1117 aa17.15■□□□□ 0.34
BRCC3-202ENST00000340647 MACC1Q6ZN28 852 aa17.15■□□□□ 0.34
BRCC3-202ENST00000340647 TEX26Q8N6G2 289 aa17.15■□□□□ 0.34
BRCC3-202ENST00000340647 PQLC3Q8N755 202 aa17.15■□□□□ 0.34
BRCC3-202ENST00000340647 PDCD7Q8N8D1 485 aaKnown RBP17.15■□□□□ 0.34
BRCC3-202ENST00000340647 DCBLD1Q8N8Z6 715 aa17.15■□□□□ 0.34
BRCC3-202ENST00000340647 LRRN4Q8WUT4 740 aa17.15■□□□□ 0.34
BRCC3-202ENST00000340647 ATP13A3Q9H7F0 1226 aa17.15■□□□□ 0.34
BRCC3-202ENST00000340647 NOD2Q9HC29 1040 aa17.15■□□□□ 0.34
BRCC3-202ENST00000340647 SEPT3Q9UH03 358 aa17.15■□□□□ 0.34
BRCC3-202ENST00000340647 RAXQ9Y2V3 346 aa17.15■□□□□ 0.34
BRCC3-202ENST00000340647 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.15■□□□□ 0.34
BRCC3-202ENST00000340647 CFAP69A5D8W1 941 aa17.14■□□□□ 0.33
BRCC3-202ENST00000340647 MAP3K6O95382 1288 aa17.14■□□□□ 0.33
BRCC3-202ENST00000340647 CDK4P11802 303 aa17.14■□□□□ 0.33
BRCC3-202ENST00000340647 JUPP14923 745 aa17.14■□□□□ 0.33
BRCC3-202ENST00000340647 PTMSP20962 102 aa17.14■□□□□ 0.33
BRCC3-202ENST00000340647 SERPINA4P29622 427 aa17.14■□□□□ 0.33
BRCC3-202ENST00000340647 AP1S1P61966 158 aa17.14■□□□□ 0.33
BRCC3-202ENST00000340647 BCL2L1Q07817 233 aa17.14■□□□□ 0.33
BRCC3-202ENST00000340647 SLC10A2Q12908 348 aaPredicted RBP17.14■□□□□ 0.33
BRCC3-202ENST00000340647 INPP5AQ14642 412 aa17.14■□□□□ 0.33
BRCC3-202ENST00000340647 PAFAH1B3Q15102 231 aaKnown RBP17.14■□□□□ 0.33
BRCC3-202ENST00000340647 ALG11Q2TAA5 492 aa17.14■□□□□ 0.33
BRCC3-202ENST00000340647 SKOR2Q2VWA4 1001 aaPredicted RBP17.14■□□□□ 0.33
BRCC3-202ENST00000340647 DEFB133Q30KQ1 61 aa17.14■□□□□ 0.33
BRCC3-202ENST00000340647 SOWAHCQ53LP3 525 aaPredicted RBP17.14■□□□□ 0.33
BRCC3-202ENST00000340647 FAM182AQ5T1J6 154 aa17.14■□□□□ 0.33
BRCC3-202ENST00000340647 DPPA4Q7L190 304 aa17.14■□□□□ 0.33
BRCC3-202ENST00000340647 PHACTR4Q8IZ21 702 aa17.14■□□□□ 0.33
BRCC3-202ENST00000340647 CACTIN-AS1Q8N1I8 211 aa17.14■□□□□ 0.33
BRCC3-202ENST00000340647 OR8K1Q8NGG5 319 aa17.14■□□□□ 0.33
BRCC3-202ENST00000340647 LMX1AQ8TE12 382 aa17.14■□□□□ 0.33
BRCC3-202ENST00000340647 FAF2Q96CS3 445 aa17.14■□□□□ 0.33
BRCC3-202ENST00000340647 SMIM14Q96QK8 99 aa17.14■□□□□ 0.33
BRCC3-202ENST00000340647 NUDCD1Q96RS6 583 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms