RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 E2F3O00716 465 aa16.47■□□□□ 0.23
PTCH1-201ENST00000331920 RARGP13631 454 aa16.47■□□□□ 0.23
PTCH1-201ENST00000331920 SERPINA4P29622 427 aa16.47■□□□□ 0.23
PTCH1-201ENST00000331920 PTGS2P35354 604 aa16.47■□□□□ 0.23
PTCH1-201ENST00000331920 SNRPFP62306 86 aaKnown RBP16.47■□□□□ 0.23
PTCH1-201ENST00000331920 ADAM17P78536 824 aa16.47■□□□□ 0.23
PTCH1-201ENST00000331920 ADGRG6Q86SQ4 1221 aa16.47■□□□□ 0.23
PTCH1-201ENST00000331920 SPATA6LQ8N4H0 392 aa16.47■□□□□ 0.23
PTCH1-201ENST00000331920 TC2NQ8N9U0 490 aa16.47■□□□□ 0.23
PTCH1-201ENST00000331920 PCDH19Q8TAB3 1148 aa16.47■□□□□ 0.23
PTCH1-201ENST00000331920 EFHD2Q96C19 240 aaPredicted RBP16.47■□□□□ 0.23
PTCH1-201ENST00000331920 TKTL2Q9H0I9 626 aa16.47■□□□□ 0.23
PTCH1-201ENST00000331920 CCNKO75909 580 aa16.47■□□□□ 0.23
PTCH1-201ENST00000331920 LHCGRP22888 699 aa16.47■□□□□ 0.23
PTCH1-201ENST00000331920 ACTR3P61158 418 aa16.47■□□□□ 0.23
PTCH1-201ENST00000331920 PPP3R1P63098 170 aa16.47■□□□□ 0.23
PTCH1-201ENST00000331920 UBAP2LQ14157 1087 aaKnown RBP16.47■□□□□ 0.23
PTCH1-201ENST00000331920 LDLRAP1Q5SW96 308 aa16.47■□□□□ 0.23
PTCH1-201ENST00000331920 HTR3CQ8WXA8 447 aa16.47■□□□□ 0.23
PTCH1-201ENST00000331920 ZNF75CPQ92670 426 aaPredicted RBP16.47■□□□□ 0.23
PTCH1-201ENST00000331920 DNASE1L2Q92874 299 aa16.47■□□□□ 0.23
PTCH1-201ENST00000331920 ZNF639Q9UID6 485 aa16.47■□□□□ 0.23
PTCH1-201ENST00000331920 MED31Q9Y3C7 131 aa16.47■□□□□ 0.23
PTCH1-201ENST00000331920 PRAMEF33A0A0G2JMD5 474 aa16.47■□□□□ 0.23
PTCH1-201ENST00000331920 PRAMEF10O60809 474 aa16.47■□□□□ 0.23
PTCH1-201ENST00000331920 PIGNO95427 931 aa16.47■□□□□ 0.23
PTCH1-201ENST00000331920 TUBG1P23258 451 aa16.47■□□□□ 0.23
PTCH1-201ENST00000331920 AFTPHQ6ULP2 937 aa16.47■□□□□ 0.23
PTCH1-201ENST00000331920 COQ8BQ96D53 544 aa16.47■□□□□ 0.23
PTCH1-201ENST00000331920 PCDHA3Q9Y5H8 950 aa16.47■□□□□ 0.23
PTCH1-201ENST00000331920 HYKKA2RU49 373 aa16.47■□□□□ 0.23
PTCH1-201ENST00000331920 XYLBO75191 536 aa16.47■□□□□ 0.23
PTCH1-201ENST00000331920 GP5P40197 560 aa16.47■□□□□ 0.23
PTCH1-201ENST00000331920 SMIM11AP58511 58 aa16.47■□□□□ 0.23
PTCH1-201ENST00000331920 Q4G0T1 1027 aa16.47■□□□□ 0.23
PTCH1-201ENST00000331920 SLC45A4Q5BKX6 768 aa16.47■□□□□ 0.23
PTCH1-201ENST00000331920 SLC25A25Q6KCM7 469 aa16.47■□□□□ 0.23
PTCH1-201ENST00000331920 BEND4Q6ZU67 534 aa16.47■□□□□ 0.23
PTCH1-201ENST00000331920 TRPV5Q9NQA5 729 aa16.47■□□□□ 0.23
PTCH1-201ENST00000331920 GULP1Q9UBP9 304 aa16.47■□□□□ 0.23
PTCH1-201ENST00000331920 ABL2P42684 1182 aa16.47■□□□□ 0.23
PTCH1-201ENST00000331920 HOMEZQ8IX15 550 aa16.47■□□□□ 0.23
PTCH1-201ENST00000331920 METTL8Q9H825 291 aaKnown RBP16.47■□□□□ 0.23
PTCH1-201ENST00000331920 FBXO6Q9NRD1 293 aaPredicted RBP16.47■□□□□ 0.23
PTCH1-201ENST00000331920 SNX7Q9UNH6 387 aa16.47■□□□□ 0.23
PTCH1-201ENST00000331920 C2CD2Q9Y426 696 aa16.47■□□□□ 0.23
PTCH1-201ENST00000331920 L7N2F9 121 aa16.47■□□□□ 0.23
PTCH1-201ENST00000331920 VAMP2P63027 116 aa16.47■□□□□ 0.23
PTCH1-201ENST00000331920 ZKSCAN4Q969J2 545 aaPredicted RBP16.47■□□□□ 0.23
PTCH1-201ENST00000331920 HIST1H2AAQ96QV6 131 aa16.47■□□□□ 0.23
PTCH1-201ENST00000331920 SSX5O60225 188 aa16.47■□□□□ 0.23
PTCH1-201ENST00000331920 TPST2O60704 377 aa16.47■□□□□ 0.23
PTCH1-201ENST00000331920 CXCR2P25025 360 aa16.47■□□□□ 0.23
PTCH1-201ENST00000331920 CADM2Q8N3J6 435 aa16.47■□□□□ 0.23
PTCH1-201ENST00000331920 ZNF548Q8NEK5 533 aaPredicted RBP16.47■□□□□ 0.23
PTCH1-201ENST00000331920 SMARCD1Q96GM5 515 aa16.47■□□□□ 0.23
PTCH1-201ENST00000331920 TSPAN16Q9UKR8 245 aa16.47■□□□□ 0.23
PTCH1-201ENST00000331920 ARL5AQ9Y689 179 aa16.47■□□□□ 0.23
PTCH1-201ENST00000331920 ARHGAP31Q2M1Z3 1444 aa16.46■□□□□ 0.23
PTCH1-201ENST00000331920 BDNFP23560 247 aa16.46■□□□□ 0.23
PTCH1-201ENST00000331920 ARRDC4Q8NCT1 418 aa16.46■□□□□ 0.23
PTCH1-201ENST00000331920 HMGXB3Q12766 1538 aa16.46■□□□□ 0.23
PTCH1-201ENST00000331920 CDHR2Q9BYE9 1310 aa16.46■□□□□ 0.23
PTCH1-201ENST00000331920 FFAR2O15552 330 aa16.46■□□□□ 0.23
PTCH1-201ENST00000331920 DNAJB3Q8WWF6 145 aa16.46■□□□□ 0.23
PTCH1-201ENST00000331920 EIF3KQ9UBQ5 218 aaKnown RBP16.46■□□□□ 0.23
PTCH1-201ENST00000331920 SLC24A2Q9UI40 661 aa16.46■□□□□ 0.23
PTCH1-201ENST00000331920 C3orf18Q9UK00 162 aa16.46■□□□□ 0.23
PTCH1-201ENST00000331920 ZNF221Q9UK13 617 aa16.46■□□□□ 0.23
PTCH1-201ENST00000331920 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.46■□□□□ 0.23
PTCH1-201ENST00000331920 CYP1A1P04798 512 aaPredicted RBP16.46■□□□□ 0.23
PTCH1-201ENST00000331920 FAM228BP0C875 321 aa16.46■□□□□ 0.23
PTCH1-201ENST00000331920 UQCRC1P31930 480 aa16.46■□□□□ 0.23
PTCH1-201ENST00000331920 BRD9Q9H8M2 597 aa16.46■□□□□ 0.23
PTCH1-201ENST00000331920 TRNAU1APQ9NX07 287 aaKnown RBP16.46■□□□□ 0.23
PTCH1-201ENST00000331920 MXD1Q05195 221 aa16.46■□□□□ 0.23
PTCH1-201ENST00000331920 SMIM5Q71RC9 77 aa16.46■□□□□ 0.23
PTCH1-201ENST00000331920 FAM129CQ86XR2 697 aa16.46■□□□□ 0.23
PTCH1-201ENST00000331920 GHDCQ8N2G8 530 aa16.46■□□□□ 0.23
PTCH1-201ENST00000331920 PIK3C3Q8NEB9 887 aa16.46■□□□□ 0.23
PTCH1-201ENST00000331920 SLC25A23Q9BV35 468 aa16.46■□□□□ 0.23
PTCH1-201ENST00000331920 MROH8Q9H579 483 aa16.46■□□□□ 0.23
PTCH1-201ENST00000331920 OR2AT4A6NND4 320 aa16.46■□□□□ 0.23
PTCH1-201ENST00000331920 PSME3P61289 254 aa16.46■□□□□ 0.23
PTCH1-201ENST00000331920 ADAM8P78325 824 aa16.46■□□□□ 0.23
PTCH1-201ENST00000331920 PDK3Q15120 406 aa16.46■□□□□ 0.23
PTCH1-201ENST00000331920 TLR1Q15399 786 aa16.46■□□□□ 0.23
PTCH1-201ENST00000331920 SNX33Q8WV41 574 aa16.46■□□□□ 0.23
PTCH1-201ENST00000331920 RNF19AQ9NV58 838 aa16.46■□□□□ 0.23
PTCH1-201ENST00000331920 INMTO95050 263 aa16.46■□□□□ 0.22
PTCH1-201ENST00000331920 SNRPB2P08579 225 aaKnown RBP16.46■□□□□ 0.22
PTCH1-201ENST00000331920 FAM153BP0C7A2 387 aa16.46■□□□□ 0.22
PTCH1-201ENST00000331920 NDST1P52848 882 aa16.46■□□□□ 0.22
PTCH1-201ENST00000331920 ZNRF3Q9ULT6 936 aa16.46■□□□□ 0.22
PTCH1-201ENST00000331920 SERPINB7O75635 380 aa16.45■□□□□ 0.22
PTCH1-201ENST00000331920 CYP17A1P05093 508 aa16.45■□□□□ 0.22
PTCH1-201ENST00000331920 ZBTB6Q15916 424 aa16.45■□□□□ 0.22
PTCH1-201ENST00000331920 FBXO47Q5MNV8 452 aa16.45■□□□□ 0.22
PTCH1-201ENST00000331920 UBE2E3Q969T4 207 aa16.45■□□□□ 0.22
PTCH1-201ENST00000331920 TM6SF2Q9BZW4 377 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 201.8 ms