RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 C6P13671 934 aa27.8■■■□□ 2.04
ATPAF1-201ENST00000329231 IGFALSP35858 605 aa27.8■■■□□ 2.04
ATPAF1-201ENST00000329231 LIG3P49916 1009 aa27.8■■■□□ 2.04
ATPAF1-201ENST00000329231 HADHBP55084 474 aaKnown RBP27.8■■■□□ 2.04
ATPAF1-201ENST00000329231 MAXP61244 160 aa27.8■■■□□ 2.04
ATPAF1-201ENST00000329231 PDE1CQ14123 709 aaPredicted RBP27.8■■■□□ 2.04
ATPAF1-201ENST00000329231 FZD2Q14332 565 aa27.8■■■□□ 2.04
ATPAF1-201ENST00000329231 PARGQ86W56 976 aa27.8■■■□□ 2.04
ATPAF1-201ENST00000329231 TP53I13Q8NBR0 393 aaPredicted RBP27.8■■■□□ 2.04
ATPAF1-201ENST00000329231 TRAF3IP1Q8TDR0 691 aaPredicted RBP27.8■■■□□ 2.04
ATPAF1-201ENST00000329231 FATE1Q969F0 183 aa27.8■■■□□ 2.04
ATPAF1-201ENST00000329231 ZNF830Q96NB3 372 aaPredicted RBP27.8■■■□□ 2.04
ATPAF1-201ENST00000329231 MAK16Q9BXY0 300 aaKnown RBP27.8■■■□□ 2.04
ATPAF1-201ENST00000329231 NT5MQ9NPB1 228 aa27.8■■■□□ 2.04
ATPAF1-201ENST00000329231 DDX56Q9NY93 547 aaKnown RBP27.8■■■□□ 2.04
ATPAF1-201ENST00000329231 COQ6Q9Y2Z9 468 aa27.8■■■□□ 2.04
ATPAF1-201ENST00000329231 PCDHGC4Q9Y5F7 938 aa27.8■■■□□ 2.04
ATPAF1-201ENST00000329231 ENC1O14682 589 aa27.79■■■□□ 2.04
ATPAF1-201ENST00000329231 MATN3O15232 486 aa27.79■■■□□ 2.04
ATPAF1-201ENST00000329231 SPOPO43791 374 aa27.79■■■□□ 2.04
ATPAF1-201ENST00000329231 LZTS3O60299 673 aaPredicted RBP27.79■■■□□ 2.04
ATPAF1-201ENST00000329231 DKK1O94907 266 aa27.79■■■□□ 2.04
ATPAF1-201ENST00000329231 MAP3K6O95382 1288 aa27.79■■■□□ 2.04
ATPAF1-201ENST00000329231 DGKAP23743 735 aa27.79■■■□□ 2.04
ATPAF1-201ENST00000329231 CDC25BP30305 580 aa27.79■■■□□ 2.04
ATPAF1-201ENST00000329231 YPEL5P62699 121 aa27.79■■■□□ 2.04
ATPAF1-201ENST00000329231 GBE1Q04446 702 aa27.79■■■□□ 2.04
ATPAF1-201ENST00000329231 PTK2BQ14289 1009 aa27.79■■■□□ 2.04
ATPAF1-201ENST00000329231 LRRC14Q15048 493 aa27.79■■■□□ 2.04
ATPAF1-201ENST00000329231 TMTC1Q8IUR5 882 aa27.79■■■□□ 2.04
ATPAF1-201ENST00000329231 MAML1Q92585 1016 aa27.79■■■□□ 2.04
ATPAF1-201ENST00000329231 TPRP12270 2363 aaKnown RBP27.79■■■□□ 2.04
ATPAF1-201ENST00000329231 PIAS2O75928 621 aa27.78■■■□□ 2.04
ATPAF1-201ENST00000329231 KRT1P04264 644 aa27.78■■■□□ 2.04
ATPAF1-201ENST00000329231 COMTP21964 271 aa27.78■■■□□ 2.04
ATPAF1-201ENST00000329231 NFKBIAP25963 317 aa27.78■■■□□ 2.04
ATPAF1-201ENST00000329231 THOP1P52888 689 aa27.78■■■□□ 2.04
ATPAF1-201ENST00000329231 HNRNPKP61978 463 aaKnown RBP eCLIP27.78■■■□□ 2.04
ATPAF1-201ENST00000329231 SEMG2Q02383 582 aa27.78■■■□□ 2.04
ATPAF1-201ENST00000329231 AGERQ15109 404 aa27.78■■■□□ 2.04
ATPAF1-201ENST00000329231 HS1BP3Q53T59 392 aa27.78■■■□□ 2.04
ATPAF1-201ENST00000329231 DPPA4Q7L190 304 aa27.78■■■□□ 2.04
ATPAF1-201ENST00000329231 SLC25A45Q8N413 288 aa27.78■■■□□ 2.04
ATPAF1-201ENST00000329231 PDCD6IPQ8WUM4 868 aaKnown RBP27.78■■■□□ 2.04
ATPAF1-201ENST00000329231 POLR1EQ9GZS1 481 aaKnown RBP27.78■■■□□ 2.04
ATPAF1-201ENST00000329231 MBNL1Q9NR56 388 aaKnown RBP27.78■■■□□ 2.04
ATPAF1-201ENST00000329231 DTLQ9NZJ0 730 aa27.78■■■□□ 2.04
ATPAF1-201ENST00000329231 AMACRQ9UHK6 382 aa27.78■■■□□ 2.04
ATPAF1-201ENST00000329231 KLK13Q9UKR3 277 aa27.78■■■□□ 2.04
ATPAF1-201ENST00000329231 COL5A1P20908 1838 aaPredicted RBP27.78■■■□□ 2.04
ATPAF1-201ENST00000329231 C3orf70A6NLC5 250 aaPredicted RBP27.77■■■□□ 2.04
ATPAF1-201ENST00000329231 H3BM21 787 aa27.77■■■□□ 2.04
ATPAF1-201ENST00000329231 NEBLO76041 1014 aa27.77■■■□□ 2.04
ATPAF1-201ENST00000329231 CSF2P04141 144 aa27.77■■■□□ 2.04
ATPAF1-201ENST00000329231 TNNT1P13805 278 aa27.77■■■□□ 2.04
ATPAF1-201ENST00000329231 CES1P23141 567 aa27.77■■■□□ 2.04
ATPAF1-201ENST00000329231 ITKQ08881 620 aa27.77■■■□□ 2.04
ATPAF1-201ENST00000329231 SLC10A2Q12908 348 aaPredicted RBP27.77■■■□□ 2.04
ATPAF1-201ENST00000329231 RALGDSQ12967 914 aa27.77■■■□□ 2.04
ATPAF1-201ENST00000329231 IRF4Q15306 451 aa27.77■■■□□ 2.04
ATPAF1-201ENST00000329231 ZNF542PQ5EBM4 170 aa27.77■■■□□ 2.04
ATPAF1-201ENST00000329231 HDAC11Q96DB2 347 aa27.77■■■□□ 2.04
ATPAF1-201ENST00000329231 RBM22Q9NW64 420 aaKnown RBP eCLIP27.77■■■□□ 2.04
ATPAF1-201ENST00000329231 MSRB2Q9Y3D2 182 aa27.77■■■□□ 2.04
ATPAF1-201ENST00000329231 HYOU1Q9Y4L1 999 aa27.77■■■□□ 2.04
ATPAF1-201ENST00000329231 EPN1Q9Y6I3 576 aaPredicted RBP27.77■■■□□ 2.04
ATPAF1-201ENST00000329231 A0A0A6YYK5 440 aaPredicted RBP27.76■■■□□ 2.03
ATPAF1-201ENST00000329231 FAM221BA6H8Z2 402 aa27.76■■■□□ 2.03
ATPAF1-201ENST00000329231 NEMP2A6NFY4 417 aa27.76■■■□□ 2.03
ATPAF1-201ENST00000329231 IPO7O95373 1038 aaKnown RBP27.76■■■□□ 2.03
ATPAF1-201ENST00000329231 CPP00450 1065 aa27.76■■■□□ 2.03
ATPAF1-201ENST00000329231 ELFN1P0C7U0 828 aa27.76■■■□□ 2.03
ATPAF1-201ENST00000329231 CCNB1P14635 433 aa27.76■■■□□ 2.03
ATPAF1-201ENST00000329231 NME1P15531 152 aaKnown RBP27.76■■■□□ 2.03
ATPAF1-201ENST00000329231 ZFXP17010 805 aaPredicted RBP27.76■■■□□ 2.03
ATPAF1-201ENST00000329231 FECHP22830 423 aa27.76■■■□□ 2.03
ATPAF1-201ENST00000329231 WSCD2Q2TBF2 565 aa27.76■■■□□ 2.03
ATPAF1-201ENST00000329231 SLC9A4Q6AI14 798 aa27.76■■■□□ 2.03
ATPAF1-201ENST00000329231 LIPIQ6XZB0 460 aa27.76■■■□□ 2.03
ATPAF1-201ENST00000329231 PLD5Q8N7P1 536 aa27.76■■■□□ 2.03
ATPAF1-201ENST00000329231 CCNYQ8ND76 341 aa27.76■■■□□ 2.03
ATPAF1-201ENST00000329231 SEMA3CQ99985 751 aa27.76■■■□□ 2.03
ATPAF1-201ENST00000329231 UCKL1Q9NWZ5 548 aa27.76■■■□□ 2.03
ATPAF1-201ENST00000329231 PHTF1Q9UMS5 762 aa27.76■■■□□ 2.03
ATPAF1-201ENST00000329231 PCDHGA1Q9Y5H4 931 aa27.76■■■□□ 2.03
ATPAF1-201ENST00000329231 ACACBO00763 2458 aa27.76■■■□□ 2.03
ATPAF1-201ENST00000329231 SHROOM3Q8TF72 1996 aa27.75■■■□□ 2.03
ATPAF1-201ENST00000329231 ANKRD36A6QL64 1941 aa27.75■■■□□ 2.03
ATPAF1-201ENST00000329231 SOWAHDA6NJG2 315 aa27.75■■■□□ 2.03
ATPAF1-201ENST00000329231 APOL1O14791 398 aa27.75■■■□□ 2.03
ATPAF1-201ENST00000329231 NDUFA10O95299 355 aa27.75■■■□□ 2.03
ATPAF1-201ENST00000329231 TRAF2Q12933 501 aa27.75■■■□□ 2.03
ATPAF1-201ENST00000329231 ZNF211Q13398 564 aaPredicted RBP27.75■■■□□ 2.03
ATPAF1-201ENST00000329231 CCDC157Q569K6 752 aa27.75■■■□□ 2.03
ATPAF1-201ENST00000329231 TPRG1LQ5T0D9 272 aa27.75■■■□□ 2.03
ATPAF1-201ENST00000329231 ARMC12Q5T9G4 340 aa27.75■■■□□ 2.03
ATPAF1-201ENST00000329231 KDM7AQ6ZMT4 941 aa27.75■■■□□ 2.03
ATPAF1-201ENST00000329231 CCDC13Q8IYE1 715 aa27.75■■■□□ 2.03
ATPAF1-201ENST00000329231 RNF25Q96BH1 459 aaPredicted RBP27.75■■■□□ 2.03
ATPAF1-201ENST00000329231 IMPACTQ9P2X3 320 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms