RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 OGFOD2Q6N063 350 aa16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 CFAP52Q8N1V2 620 aa16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 ALLCQ8N6M5 410 aa16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 ATP6V1C2Q8NEY4 427 aa16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 SPOCK2Q92563 424 aa16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 MBD5Q9P267 1494 aa16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 DHRS12A0PJE2 317 aa16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 TBL1XO60907 577 aa16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 CCNB1P14635 433 aa16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 VEGFAP15692 232 aaPredicted RBP16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 NAB1Q13506 487 aa16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 C5orf22Q49AR2 442 aa16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 RNF43Q68DV7 783 aa16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 RETSATQ6NUM9 610 aa16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 LDB1Q86U70 411 aaPredicted RBP16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 NAT16Q8N8M0 369 aa16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 FNDC11Q9BVV2 318 aa16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 PLGRKTQ9HBL7 147 aa16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 ZNF232Q9UNY5 417 aa16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 RBMXL2O75526 392 aaKnown RBP16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 POLR2EP19388 210 aaKnown RBP16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 SCNN1GP51170 649 aa16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 PURAQ00577 322 aaKnown RBP16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 HSF2Q03933 536 aa16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 MFSD10Q14728 455 aa16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 XRRA1Q6P2D8 792 aa16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 ZNF433Q8N7K0 673 aaPredicted RBP16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 NELL1Q92832 810 aa16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 MYDGFQ969H8 173 aa16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 PGM2Q96G03 612 aa16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 MNTQ99583 582 aa16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 WTIPA6NIX2 430 aaPredicted RBP16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 VPS72Q15906 364 aa16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 PTPRNQ16849 979 aa16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 PCID2Q5JVF3 399 aa16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 CRTC3Q6UUV7 619 aa16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 SNX15Q9NRS6 342 aa16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 INTS7Q9NVH2 962 aaKnown RBP16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 A0A1W2PQ67 120 aa16.87■□□□□ 0.29
TSPAN3-201ENST00000267970 STX11O75558 287 aa16.87■□□□□ 0.29
TSPAN3-201ENST00000267970 ANXA5P08758 320 aa16.87■□□□□ 0.29
TSPAN3-201ENST00000267970 MYL9P24844 172 aa16.87■□□□□ 0.29
TSPAN3-201ENST00000267970 EGFLAMQ63HQ2 1017 aa16.87■□□□□ 0.29
TSPAN3-201ENST00000267970 METTL7BQ6UX53 244 aa16.87■□□□□ 0.29
TSPAN3-201ENST00000267970 KATNAL2Q8IYT4 538 aa16.87■□□□□ 0.29
TSPAN3-201ENST00000267970 ZNF655Q8N720 491 aaPredicted RBP16.87■□□□□ 0.29
TSPAN3-201ENST00000267970 AMER2Q8N7J2 671 aa16.87■□□□□ 0.29
TSPAN3-201ENST00000267970 ZNF366Q8N895 744 aa16.87■□□□□ 0.29
TSPAN3-201ENST00000267970 STAG3L4Q8TBR4 150 aa16.87■□□□□ 0.29
TSPAN3-201ENST00000267970 KLHL5Q96PQ7 755 aa16.87■□□□□ 0.29
TSPAN3-201ENST00000267970 PRKD2Q9BZL6 878 aa16.87■□□□□ 0.29
TSPAN3-201ENST00000267970 FBXO44Q9H4M3 255 aa16.87■□□□□ 0.29
TSPAN3-201ENST00000267970 TRPV5Q9NQA5 729 aa16.87■□□□□ 0.29
TSPAN3-201ENST00000267970 CCDC162PA2VCL2 907 aa16.87■□□□□ 0.29
TSPAN3-201ENST00000267970 DCDC2CA8MYV0 355 aa16.87■□□□□ 0.29
TSPAN3-201ENST00000267970 TOR1BO14657 336 aa16.87■□□□□ 0.29
TSPAN3-201ENST00000267970 DBIP07108 87 aaKnown RBP16.87■□□□□ 0.29
TSPAN3-201ENST00000267970 CTSEP14091 401 aa16.87■□□□□ 0.29
TSPAN3-201ENST00000267970 MC1RQ01726 317 aa16.87■□□□□ 0.29
TSPAN3-201ENST00000267970 PCDH1Q08174 1060 aa16.87■□□□□ 0.29
TSPAN3-201ENST00000267970 POF1BQ8WVV4 589 aa16.87■□□□□ 0.29
TSPAN3-201ENST00000267970 SERPINB11Q96P15 392 aa16.87■□□□□ 0.29
TSPAN3-201ENST00000267970 MALT1Q9UDY8 824 aa16.87■□□□□ 0.29
TSPAN3-201ENST00000267970 SNX6Q9UNH7 406 aa16.87■□□□□ 0.29
TSPAN3-201ENST00000267970 OAS3Q9Y6K5 1087 aaKnown RBP16.87■□□□□ 0.29
TSPAN3-201ENST00000267970 ZMYM2Q9UBW7 1377 aa16.87■□□□□ 0.29
TSPAN3-201ENST00000267970 TRBV23OR9-2A0A075B6M9 112 aa16.87■□□□□ 0.29
TSPAN3-201ENST00000267970 ITPKAP23677 461 aa16.87■□□□□ 0.29
TSPAN3-201ENST00000267970 CDK7P50613 346 aa16.87■□□□□ 0.29
TSPAN3-201ENST00000267970 GTF2A2P52657 109 aa16.87■□□□□ 0.29
TSPAN3-201ENST00000267970 ZNF554Q86TJ5 538 aa16.87■□□□□ 0.29
TSPAN3-201ENST00000267970 RGL4Q8IZJ4 473 aa16.87■□□□□ 0.29
TSPAN3-201ENST00000267970 ING5Q8WYH8 240 aa16.87■□□□□ 0.29
TSPAN3-201ENST00000267970 C1GALT1C1Q96EU7 318 aa16.87■□□□□ 0.29
TSPAN3-201ENST00000267970 MIR1-1HGQ9H1L0 117 aa16.87■□□□□ 0.29
TSPAN3-201ENST00000267970 MARCH2Q9P0N8 246 aa16.87■□□□□ 0.29
TSPAN3-201ENST00000267970 ADGRE2Q9UHX3 823 aa16.87■□□□□ 0.29
TSPAN3-201ENST00000267970 IFI30P13284 250 aa16.87■□□□□ 0.29
TSPAN3-201ENST00000267970 TAS2R41P59536 307 aa16.87■□□□□ 0.29
TSPAN3-201ENST00000267970 CERCAMQ5T4B2 595 aa16.87■□□□□ 0.29
TSPAN3-201ENST00000267970 GPR65Q8IYL9 337 aa16.87■□□□□ 0.29
TSPAN3-201ENST00000267970 REPS2Q8NFH8 660 aa16.87■□□□□ 0.29
TSPAN3-201ENST00000267970 LINGO1Q96FE5 620 aa16.87■□□□□ 0.29
TSPAN3-201ENST00000267970 UCKL1Q9NWZ5 548 aa16.87■□□□□ 0.29
TSPAN3-201ENST00000267970 CPSF4LA6NMK7 179 aaKnown RBP16.87■□□□□ 0.29
TSPAN3-201ENST00000267970 UGT2B15P54855 530 aa16.87■□□□□ 0.29
TSPAN3-201ENST00000267970 KLHL23Q8NBE8 558 aa16.87■□□□□ 0.29
TSPAN3-201ENST00000267970 FERD3LQ96RJ6 166 aa16.87■□□□□ 0.29
TSPAN3-201ENST00000267970 SSR3Q9UNL2 185 aa16.87■□□□□ 0.29
TSPAN3-201ENST00000267970 TBC1D3BA6NDS4 549 aa16.86■□□□□ 0.29
TSPAN3-201ENST00000267970 ITGA2BP08514 1039 aa16.86■□□□□ 0.29
TSPAN3-201ENST00000267970 MTHFRP42898 656 aa16.86■□□□□ 0.29
TSPAN3-201ENST00000267970 SH3RF1Q7Z6J0 888 aa16.86■□□□□ 0.29
TSPAN3-201ENST00000267970 EPS8L1Q8TE68 723 aa16.86■□□□□ 0.29
TSPAN3-201ENST00000267970 KBTBD7Q8WVZ9 684 aa16.86■□□□□ 0.29
TSPAN3-201ENST00000267970 COX4I2Q96KJ9 171 aa16.86■□□□□ 0.29
TSPAN3-201ENST00000267970 PANX3Q96QZ0 392 aa16.86■□□□□ 0.29
TSPAN3-201ENST00000267970 PCDHB12Q9Y5F1 795 aa16.86■□□□□ 0.29
TSPAN3-201ENST00000267970 GSAPA4D1B5 854 aa16.86■□□□□ 0.29
TSPAN3-201ENST00000267970 H3BMM5 538 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms