RNA–Protein interactions for RNA: ENST00000639667.1

HNRNPU-220, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 2

Gene HNRNPU, Length 3,940 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-220ENST00000639667 USP31Q70CQ4 1352 aa7.72□□□□□ -1.17
HNRNPU-220ENST00000639667 ZNF772Q68DY9 489 aaPredicted RBP7.72□□□□□ -1.17
HNRNPU-220ENST00000639667 UNC5CLQ8IV45 518 aa7.72□□□□□ -1.17
HNRNPU-220ENST00000639667 NEUROD2Q15784 382 aa7.72□□□□□ -1.17
HNRNPU-220ENST00000639667 FAM98CQ17RN3 349 aaKnown RBP7.72□□□□□ -1.17
HNRNPU-220ENST00000639667 YTHDC1Q96MU7 727 aaKnown RBP7.72□□□□□ -1.17
HNRNPU-220ENST00000639667 TRPC5Q9UL62 973 aaPredicted RBP7.72□□□□□ -1.17
HNRNPU-220ENST00000639667 AHDC1Q5TGY3 1603 aaPredicted RBP7.72□□□□□ -1.17
HNRNPU-220ENST00000639667 SULT6B1Q6IMI4 303 aa7.71□□□□□ -1.17
HNRNPU-220ENST00000639667 SSH2Q76I76 1423 aa7.71□□□□□ -1.17
HNRNPU-220ENST00000639667 FLT4P35916 1363 aa7.71□□□□□ -1.18
HNRNPU-220ENST00000639667 EIF4A2Q14240 407 aaKnown RBP7.71□□□□□ -1.18
HNRNPU-220ENST00000639667 DDX54Q8TDD1 881 aaKnown RBP7.71□□□□□ -1.18
HNRNPU-220ENST00000639667 MAPK8IP3Q9UPT6 1336 aa7.71□□□□□ -1.18
HNRNPU-220ENST00000639667 TATP17735 454 aaPredicted RBP7.71□□□□□ -1.18
HNRNPU-220ENST00000639667 CCDC146Q8IYE0 955 aa7.71□□□□□ -1.18
HNRNPU-220ENST00000639667 OVOS2A0A0J9YW53 1432 aa7.7□□□□□ -1.18
HNRNPU-220ENST00000639667 OVOS2Q6IE36 1432 aa7.7□□□□□ -1.18
HNRNPU-220ENST00000639667 PDE3BQ13370 1112 aa7.7□□□□□ -1.18
HNRNPU-220ENST00000639667 RXRBP28702 533 aa7.7□□□□□ -1.18
HNRNPU-220ENST00000639667 TOPAZ1Q8N9V7 1692 aa7.69□□□□□ -1.18
HNRNPU-220ENST00000639667 CCDC184Q52MB2 194 aa7.69□□□□□ -1.18
HNRNPU-220ENST00000639667 NBPF6Q5VWK0 638 aa7.69□□□□□ -1.18
HNRNPU-220ENST00000639667 NBPF4Q96M43 638 aa7.69□□□□□ -1.18
HNRNPU-220ENST00000639667 EYA1Q99502 592 aa7.69□□□□□ -1.18
HNRNPU-220ENST00000639667 NPC1L1Q9UHC9 1359 aa7.69□□□□□ -1.18
HNRNPU-220ENST00000639667 COL16A1Q07092 1604 aaPredicted RBP7.69□□□□□ -1.18
HNRNPU-220ENST00000639667 TCP11L2Q8N4U5 519 aa7.69□□□□□ -1.18
HNRNPU-220ENST00000639667 AATKQ6ZMQ8 1374 aa7.69□□□□□ -1.18
HNRNPU-220ENST00000639667 EXOC5O00471 708 aa7.68□□□□□ -1.18
HNRNPU-220ENST00000639667 AEBP1Q8IUX7 1158 aa7.68□□□□□ -1.18
HNRNPU-220ENST00000639667 SYTL4Q96C24 671 aaPredicted RBP7.68□□□□□ -1.18
HNRNPU-220ENST00000639667 NHSL1Q5SYE7 1610 aa7.68□□□□□ -1.18
HNRNPU-220ENST00000639667 WDR17Q8IZU2 1322 aa7.68□□□□□ -1.18
HNRNPU-220ENST00000639667 MYOM1P52179 1685 aa7.68□□□□□ -1.18
HNRNPU-220ENST00000639667 PRKAR2BP31323 418 aa7.68□□□□□ -1.18
HNRNPU-220ENST00000639667 ERBB3P21860 1342 aa7.68□□□□□ -1.18
HNRNPU-220ENST00000639667 GJD4Q96KN9 370 aaPredicted RBP7.68□□□□□ -1.18
HNRNPU-220ENST00000639667 PARD3Q8TEW0 1356 aa7.67□□□□□ -1.18
HNRNPU-220ENST00000639667 IL2RBP14784 551 aa7.67□□□□□ -1.18
HNRNPU-220ENST00000639667 C1orf141Q5JVX7 400 aa7.67□□□□□ -1.18
HNRNPU-220ENST00000639667 PNNQ9H307 717 aaKnown RBP7.67□□□□□ -1.18
HNRNPU-220ENST00000639667 RRP7AQ9Y3A4 280 aaKnown RBP7.67□□□□□ -1.18
HNRNPU-220ENST00000639667 MED1Q15648 1581 aaPredicted RBP7.67□□□□□ -1.18
HNRNPU-220ENST00000639667 RBM6P78332 1123 aaKnown RBP7.67□□□□□ -1.18
HNRNPU-220ENST00000639667 DDB1Q16531 1140 aa7.67□□□□□ -1.18
HNRNPU-220ENST00000639667 PLEKHO1Q53GL0 409 aaPredicted RBP7.67□□□□□ -1.18
HNRNPU-220ENST00000639667 INSRP06213 1382 aa7.67□□□□□ -1.18
HNRNPU-220ENST00000639667 VPS72Q15906 364 aa7.67□□□□□ -1.18
HNRNPU-220ENST00000639667 FAM182BQ5T319 152 aa7.67□□□□□ -1.18
HNRNPU-220ENST00000639667 FNBP4Q8N3X1 1017 aaPredicted RBP7.67□□□□□ -1.18
HNRNPU-220ENST00000639667 CPDO75976 1380 aa7.67□□□□□ -1.18
HNRNPU-220ENST00000639667 LRP6O75581 1613 aa7.66□□□□□ -1.18
HNRNPU-220ENST00000639667 IL13P35225 146 aa7.66□□□□□ -1.18
HNRNPU-220ENST00000639667 ZNF530Q6P9A1 599 aaPredicted RBP7.66□□□□□ -1.18
HNRNPU-220ENST00000639667 POTEAQ6S8J7 498 aa7.66□□□□□ -1.18
HNRNPU-220ENST00000639667 SEPT12Q8IYM1 358 aa7.66□□□□□ -1.18
HNRNPU-220ENST00000639667 CARD10Q9BWT7 1032 aa7.66□□□□□ -1.18
HNRNPU-220ENST00000639667 AKAP12Q02952 1782 aa7.66□□□□□ -1.18
HNRNPU-220ENST00000639667 PIK3C2AO00443 1686 aa7.66□□□□□ -1.18
HNRNPU-220ENST00000639667 RTF1Q92541 710 aaKnown RBP7.66□□□□□ -1.18
HNRNPU-220ENST00000639667 ADAMTS8Q9UP79 889 aa7.66□□□□□ -1.18
HNRNPU-220ENST00000639667 SPG7Q9UQ90 795 aa7.66□□□□□ -1.18
HNRNPU-220ENST00000639667 MON2Q7Z3U7 1717 aa7.66□□□□□ -1.18
HNRNPU-220ENST00000639667 LAS1LQ9Y4W2 734 aaKnown RBP7.66□□□□□ -1.18
HNRNPU-220ENST00000639667 ZCRB1Q8TBF4 217 aaKnown RBP7.65□□□□□ -1.18
HNRNPU-220ENST00000639667 RTL1A6NKG5 1358 aa7.65□□□□□ -1.18
HNRNPU-220ENST00000639667 CCER2I3L3R5 266 aa7.64□□□□□ -1.19
HNRNPU-220ENST00000639667 ACSBG1Q96GR2 724 aa7.64□□□□□ -1.19
HNRNPU-220ENST00000639667 SPATA31A1Q5TZJ5 1347 aa7.64□□□□□ -1.19
HNRNPU-220ENST00000639667 SPATA31A5Q5VU36 1347 aa7.64□□□□□ -1.19
HNRNPU-220ENST00000639667 SPATA31A7Q8IWB4 1347 aa7.64□□□□□ -1.19
HNRNPU-220ENST00000639667 TRPM3Q9HCF6 1732 aaPredicted RBP7.64□□□□□ -1.19
HNRNPU-220ENST00000639667 BLMP54132 1417 aaPredicted RBP7.64□□□□□ -1.19
HNRNPU-220ENST00000639667 HNRNPUQ00839 825 aaKnown RBP eCLIP7.64□□□□□ -1.19
HNRNPU-220ENST00000639667 APAF1O14727 1248 aa7.63□□□□□ -1.19
HNRNPU-220ENST00000639667 CRB1P82279 1406 aa7.63□□□□□ -1.19
HNRNPU-220ENST00000639667 KIF20BQ96Q89 1820 aa7.63□□□□□ -1.19
HNRNPU-220ENST00000639667 FCHSD2O94868 740 aa7.63□□□□□ -1.19
HNRNPU-220ENST00000639667 CDCA7Q9BWT1 371 aaPredicted RBP7.63□□□□□ -1.19
HNRNPU-220ENST00000639667 KIF24Q5T7B8 1368 aa7.63□□□□□ -1.19
HNRNPU-220ENST00000639667 ALS2Q96Q42 1657 aa7.63□□□□□ -1.19
HNRNPU-220ENST00000639667 CAMTA1Q9Y6Y1 1673 aa7.63□□□□□ -1.19
HNRNPU-220ENST00000639667 SLIT3O75094 1523 aa7.63□□□□□ -1.19
HNRNPU-220ENST00000639667 RIPK4P57078 832 aa7.62□□□□□ -1.19
HNRNPU-220ENST00000639667 SF3B2Q13435 895 aaKnown RBP7.62□□□□□ -1.19
HNRNPU-220ENST00000639667 MPRIPQ6WCQ1 1025 aa7.62□□□□□ -1.19
HNRNPU-220ENST00000639667 KRT27Q7Z3Y8 459 aa7.62□□□□□ -1.19
HNRNPU-220ENST00000639667 GAS2L2Q8NHY3 880 aa7.62□□□□□ -1.19
HNRNPU-220ENST00000639667 RUNDC1Q96C34 613 aa7.62□□□□□ -1.19
HNRNPU-220ENST00000639667 COL5A2P05997 1499 aaPredicted RBP7.62□□□□□ -1.19
HNRNPU-220ENST00000639667 THRAP3Q9Y2W1 955 aaKnown RBP7.62□□□□□ -1.19
HNRNPU-220ENST00000639667 TEFQ10587 303 aa7.62□□□□□ -1.19
HNRNPU-220ENST00000639667 AMOTQ4VCS5 1084 aa7.62□□□□□ -1.19
HNRNPU-220ENST00000639667 NRKQ7Z2Y5 1582 aa7.62□□□□□ -1.19
HNRNPU-220ENST00000639667 IFNL2Q8IZJ0 200 aa7.61□□□□□ -1.19
HNRNPU-220ENST00000639667 PNISRQ8TF01 805 aaKnown RBP7.61□□□□□ -1.19
HNRNPU-220ENST00000639667 RGS17Q9UGC6 210 aaPredicted RBP7.61□□□□□ -1.19
HNRNPU-220ENST00000639667 NFAT5O94916 1531 aa7.61□□□□□ -1.19
HNRNPU-220ENST00000639667 IGSF1Q8N6C5 1336 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 169.6 ms