RNA–Protein interactions for RNA: ENST00000638952.1

HNRNPU-217, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-217ENST00000638952 CENPHQ9H3R5 247 aa20.45■□□□□ 0.86
HNRNPU-217ENST00000638952 CDK19Q9BWU1 502 aa20.45■□□□□ 0.86
HNRNPU-217ENST00000638952 KINO60870 393 aaKnown RBP20.44■□□□□ 0.86
HNRNPU-217ENST00000638952 ERLIN1O75477 346 aa20.44■□□□□ 0.86
HNRNPU-217ENST00000638952 NEFHP12036 1026 aa20.44■□□□□ 0.86
HNRNPU-217ENST00000638952 NLRP2Q9NX02 1062 aa20.44■□□□□ 0.86
HNRNPU-217ENST00000638952 FYB1O15117 783 aa20.44■□□□□ 0.86
HNRNPU-217ENST00000638952 HIP1O00291 1037 aa20.44■□□□□ 0.86
HNRNPU-217ENST00000638952 MPNDQ8N594 471 aa20.44■□□□□ 0.86
HNRNPU-217ENST00000638952 C11orf95C9JLR9 678 aaPredicted RBP20.44■□□□□ 0.86
HNRNPU-217ENST00000638952 AEBP1Q8IUX7 1158 aa20.44■□□□□ 0.86
HNRNPU-217ENST00000638952 TROQ12816 1431 aaPredicted RBP20.43■□□□□ 0.86
HNRNPU-217ENST00000638952 CABP1Q9NZU7 370 aa20.43■□□□□ 0.86
HNRNPU-217ENST00000638952 SULT6B1Q6IMI4 303 aa20.43■□□□□ 0.86
HNRNPU-217ENST00000638952 ERLIN2O94905 339 aa20.43■□□□□ 0.86
HNRNPU-217ENST00000638952 PDCP20941 246 aa20.43■□□□□ 0.86
HNRNPU-217ENST00000638952 FILIP1LQ4L180 1135 aa20.43■□□□□ 0.86
HNRNPU-217ENST00000638952 CCT4P50991 539 aaKnown RBP20.42■□□□□ 0.86
HNRNPU-217ENST00000638952 CCDC43Q96MW1 224 aaKnown RBP20.42■□□□□ 0.86
HNRNPU-217ENST00000638952 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.42■□□□□ 0.862e-10■■■□□ 16.6
HNRNPU-217ENST00000638952 C20orf194Q5TEA3 1177 aa20.42■□□□□ 0.86
HNRNPU-217ENST00000638952 TRIM34Q9BYJ4 488 aa20.42■□□□□ 0.86
HNRNPU-217ENST00000638952 STK3Q13188 491 aa20.42■□□□□ 0.86
HNRNPU-217ENST00000638952 ERC1Q8IUD2 1116 aa20.42■□□□□ 0.86
HNRNPU-217ENST00000638952 PCF11O94913 1555 aaKnown RBP20.42■□□□□ 0.86
HNRNPU-217ENST00000638952 ENOX2Q16206 610 aaKnown RBP20.41■□□□□ 0.86
HNRNPU-217ENST00000638952 CYP46A1Q9Y6A2 500 aa20.41■□□□□ 0.86
HNRNPU-217ENST00000638952 BRPF1P55201 1214 aaPredicted RBP20.41■□□□□ 0.86
HNRNPU-217ENST00000638952 FAM69CQ0P6D2 419 aa20.41■□□□□ 0.86
HNRNPU-217ENST00000638952 WDR33Q9C0J8 1336 aaKnown RBP20.41■□□□□ 0.86
HNRNPU-217ENST00000638952 CDK13Q14004 1512 aaKnown RBP20.4■□□□□ 0.86
HNRNPU-217ENST00000638952 PRDM10Q9NQV6 1147 aa20.4■□□□□ 0.86
HNRNPU-217ENST00000638952 OSCARQ8IYS5 282 aa20.4■□□□□ 0.86
HNRNPU-217ENST00000638952 ABTB2Q8N961 1025 aa20.4■□□□□ 0.86
HNRNPU-217ENST00000638952 BRMS1Q9HCU9 246 aa20.4■□□□□ 0.86
HNRNPU-217ENST00000638952 FAM193AP78312 1265 aa20.4■□□□□ 0.86
HNRNPU-217ENST00000638952 ZNF396Q96N95 335 aaPredicted RBP20.4■□□□□ 0.86
HNRNPU-217ENST00000638952 ANKRD62A6NC57 917 aa20.39■□□□□ 0.85
HNRNPU-217ENST00000638952 PDCL2Q8N4E4 241 aa20.39■□□□□ 0.85
HNRNPU-217ENST00000638952 TMEM57Q8N5G2 664 aa20.39■□□□□ 0.85
HNRNPU-217ENST00000638952 TXNDC2Q86VQ3 553 aa20.39■□□□□ 0.85
HNRNPU-217ENST00000638952 CCDC192P0DO97 292 aa20.39■□□□□ 0.85
HNRNPU-217ENST00000638952 ESPNB1AK53 854 aa20.38■□□□□ 0.85
HNRNPU-217ENST00000638952 HDGFL1Q5TGJ6 251 aa20.38■□□□□ 0.85
HNRNPU-217ENST00000638952 NSD3Q9BZ95 1437 aa20.38■□□□□ 0.85
HNRNPU-217ENST00000638952 ZNF428Q96B54 188 aa20.38■□□□□ 0.85
HNRNPU-217ENST00000638952 CIZ1Q9ULV3 898 aaPredicted RBP20.38■□□□□ 0.85
HNRNPU-217ENST00000638952 CTDP1Q9Y5B0 961 aaPredicted RBP20.38■□□□□ 0.85
HNRNPU-217ENST00000638952 PLEKHH2Q8IVE3 1493 aa20.37■□□□□ 0.85
HNRNPU-217ENST00000638952 SEPT7Q16181 437 aaKnown RBP20.37■□□□□ 0.85
HNRNPU-217ENST00000638952 TNMDQ9H2S6 317 aa20.37■□□□□ 0.85
HNRNPU-217ENST00000638952 XBP1P17861 261 aa20.37■□□□□ 0.85
HNRNPU-217ENST00000638952 STK38Q15208 465 aa20.37■□□□□ 0.85
HNRNPU-217ENST00000638952 TAX1BP1Q86VP1 789 aa20.37■□□□□ 0.85
HNRNPU-217ENST00000638952 CCDC102AQ96A19 550 aa20.37■□□□□ 0.85
HNRNPU-217ENST00000638952 PLEKHO1Q53GL0 409 aaPredicted RBP20.36■□□□□ 0.85
HNRNPU-217ENST00000638952 NESP48681 1621 aa20.36■□□□□ 0.85
HNRNPU-217ENST00000638952 ATP2B1P20020 1258 aa20.36■□□□□ 0.85
HNRNPU-217ENST00000638952 CCDC181Q5TID7 509 aa20.36■□□□□ 0.85
HNRNPU-217ENST00000638952 CNKSR2Q8WXI2 1034 aa20.36■□□□□ 0.85
HNRNPU-217ENST00000638952 SIL1Q9H173 461 aa20.36■□□□□ 0.85
HNRNPU-217ENST00000638952 MAGEC2Q9UBF1 373 aaPredicted RBP20.36■□□□□ 0.85
HNRNPU-217ENST00000638952 DHX8Q14562 1220 aaKnown RBP20.36■□□□□ 0.85
HNRNPU-217ENST00000638952 SERPINC1P01008 464 aa20.36■□□□□ 0.85
HNRNPU-217ENST00000638952 FAM177A1Q8N128 213 aaPredicted RBP20.35■□□□□ 0.85
HNRNPU-217ENST00000638952 MTMR7Q9Y216 660 aa20.35■□□□□ 0.85
HNRNPU-217ENST00000638952 TOPBP1Q92547 1522 aa20.35■□□□□ 0.85
HNRNPU-217ENST00000638952 SRCIN1Q9C0H9 1055 aa20.34■□□□□ 0.85
HNRNPU-217ENST00000638952 PTPN23Q9H3S7 1636 aa20.34■□□□□ 0.85
HNRNPU-217ENST00000638952 CBX1P83916 185 aa20.34■□□□□ 0.85
HNRNPU-217ENST00000638952 TBC1D2BQ9UPU7 963 aa20.34■□□□□ 0.85
HNRNPU-217ENST00000638952 POLA1P09884 1462 aaPredicted RBP20.34■□□□□ 0.85
HNRNPU-217ENST00000638952 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.33■□□□□ 0.851e-9■■■■■ 34.7
HNRNPU-217ENST00000638952 RRS1Q15050 365 aaKnown RBP20.33■□□□□ 0.85
HNRNPU-217ENST00000638952 ANKRD1Q15327 319 aa20.33■□□□□ 0.85
HNRNPU-217ENST00000638952 ZNHIT6Q9NWK9 470 aaKnown RBP20.33■□□□□ 0.85
HNRNPU-217ENST00000638952 EPRSP07814 1512 aaKnown RBP20.33■□□□□ 0.85
HNRNPU-217ENST00000638952 TMPOP42166 694 aaKnown RBP20.33■□□□□ 0.84
HNRNPU-217ENST00000638952 TTC39AQ5SRH9 613 aa20.33■□□□□ 0.84
HNRNPU-217ENST00000638952 SART3Q15020 963 aaKnown RBP20.33■□□□□ 0.84
HNRNPU-217ENST00000638952 LARP1BQ659C4 914 aaKnown RBP20.33■□□□□ 0.84
HNRNPU-217ENST00000638952 ANKRD18AQ8IVF6 992 aa20.32■□□□□ 0.84
HNRNPU-217ENST00000638952 PDRG1Q9NUG6 133 aa20.32■□□□□ 0.84
HNRNPU-217ENST00000638952 KRT85P78386 507 aa20.32■□□□□ 0.84
HNRNPU-217ENST00000638952 PPFIBP1Q86W92 1011 aa20.32■□□□□ 0.84
HNRNPU-217ENST00000638952 ANKRD30BQ9BXX2 1392 aa20.32■□□□□ 0.84
HNRNPU-217ENST00000638952 NKTRP30414 1462 aaKnown RBP20.32■□□□□ 0.84
HNRNPU-217ENST00000638952 IBSPP21815 317 aaPredicted RBP20.31■□□□□ 0.84
HNRNPU-217ENST00000638952 GPRASP1Q5JY77 1395 aa20.31■□□□□ 0.84
HNRNPU-217ENST00000638952 CWC27Q6UX04 472 aaKnown RBP20.31■□□□□ 0.84
HNRNPU-217ENST00000638952 RTEL1-TNFRSF6BF6WH68 1400 aa20.31■□□□□ 0.84
HNRNPU-217ENST00000638952 ATF3P18847 181 aa20.3■□□□□ 0.84
HNRNPU-217ENST00000638952 ESCO1Q5FWF5 840 aa20.3■□□□□ 0.84
HNRNPU-217ENST00000638952 KRI1Q8N9T8 703 aaKnown RBP20.3■□□□□ 0.84
HNRNPU-217ENST00000638952 IL1RAPL2Q9NP60 686 aa20.3■□□□□ 0.84
HNRNPU-217ENST00000638952 PIP4K2AP48426 406 aaPredicted RBP20.3■□□□□ 0.84
HNRNPU-217ENST00000638952 RARSP54136 660 aaKnown RBP20.3■□□□□ 0.84
HNRNPU-217ENST00000638952 FCHSD2O94868 740 aa20.3■□□□□ 0.84
HNRNPU-217ENST00000638952 ME1P48163 572 aa20.3■□□□□ 0.84
HNRNPU-217ENST00000638952 RBM33Q96EV2 1170 aaKnown RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms